RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 NSUN4Q96CB9 384 aaKnown RBP14.79□□□□□ -0.04
DDB1-209ENST00000537877 KIF2CQ99661 725 aa14.79□□□□□ -0.04
DDB1-209ENST00000537877 SUGT1Q9Y2Z0 365 aa14.79□□□□□ -0.04
DDB1-209ENST00000537877 ZNF646O15015 1829 aaPredicted RBP14.79□□□□□ -0.04
DDB1-209ENST00000537877 PSME4Q14997 1843 aa14.79□□□□□ -0.04
DDB1-209ENST00000537877 PPIP5K2O43314 1243 aa14.78□□□□□ -0.04
DDB1-209ENST00000537877 ECE2O60344 883 aa14.78□□□□□ -0.04
DDB1-209ENST00000537877 GSTO1P78417 241 aa14.78□□□□□ -0.04
DDB1-209ENST00000537877 MECOMQ03112 1051 aa14.78□□□□□ -0.04
DDB1-209ENST00000537877 NECTIN1Q15223 517 aa14.78□□□□□ -0.04
DDB1-209ENST00000537877 RABEP1Q15276 862 aa14.78□□□□□ -0.04
DDB1-209ENST00000537877 AOC3Q16853 763 aa14.78□□□□□ -0.04
DDB1-209ENST00000537877 DOK7Q18PE1 504 aa14.78□□□□□ -0.04
DDB1-209ENST00000537877 RNF20Q5VTR2 975 aa14.78□□□□□ -0.04
DDB1-209ENST00000537877 IL27Q8NEV9 243 aa14.78□□□□□ -0.04
DDB1-209ENST00000537877 RPAP1Q9BWH6 1393 aaPredicted RBP14.77□□□□□ -0.04
DDB1-209ENST00000537877 MBD4O95243 580 aa14.77□□□□□ -0.04
DDB1-209ENST00000537877 HSPD1P10809 573 aaKnown RBP14.77□□□□□ -0.04
DDB1-209ENST00000537877 GNAT2P19087 354 aa14.77□□□□□ -0.04
DDB1-209ENST00000537877 FKBP1AP62942 108 aaKnown RBP14.77□□□□□ -0.04
DDB1-209ENST00000537877 GTF2IP78347 998 aa14.77□□□□□ -0.04
DDB1-209ENST00000537877 MFSD14BQ5SR56 506 aa14.77□□□□□ -0.04
DDB1-209ENST00000537877 KCNB2Q92953 911 aa14.77□□□□□ -0.04
DDB1-209ENST00000537877 JAG2Q9Y219 1238 aa14.77□□□□□ -0.04
DDB1-209ENST00000537877 ZMYM6O95789 1325 aa14.77□□□□□ -0.05
DDB1-209ENST00000537877 LTBP3Q9NS15 1303 aa14.77□□□□□ -0.05
DDB1-209ENST00000537877 LAMA4Q16363 1823 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 ZKSCAN1P17029 563 aaPredicted RBP14.76□□□□□ -0.05
DDB1-209ENST00000537877 VPS53Q5VIR6 699 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 CREB3L3Q68CJ9 461 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 CERS3Q8IU89 383 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 SLF2Q8IX21 1173 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 NLGN2Q8NFZ4 835 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 ZNF384Q8TF68 577 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 STRBPQ96SI9 672 aaKnown RBP14.76□□□□□ -0.05
DDB1-209ENST00000537877 DBNDD1Q9H9R9 158 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 PALD1Q9ULE6 856 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 BCS1LQ9Y276 419 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 SCN9AQ15858 1988 aa14.76□□□□□ -0.05
DDB1-209ENST00000537877 MAGEB6P1A0A0J9YX57 407 aa14.75□□□□□ -0.05
DDB1-209ENST00000537877 SLC27A2O14975 620 aa14.75□□□□□ -0.05
DDB1-209ENST00000537877 LDHCP07864 332 aa14.75□□□□□ -0.05
DDB1-209ENST00000537877 STRIP1Q5VSL9 837 aa14.75□□□□□ -0.05
DDB1-209ENST00000537877 TTLL5Q6EMB2 1281 aa14.75□□□□□ -0.05
DDB1-209ENST00000537877 TAOK3Q9H2K8 898 aa14.75□□□□□ -0.05
DDB1-209ENST00000537877 CTNNA3Q9UI47 895 aa14.75□□□□□ -0.05
DDB1-209ENST00000537877 SNX14Q9Y5W7 946 aa14.75□□□□□ -0.05
DDB1-209ENST00000537877 MYH2Q9UKX2 1941 aa14.75□□□□□ -0.05
DDB1-209ENST00000537877 FOXP2O15409 715 aa14.74□□□□□ -0.05
DDB1-209ENST00000537877 TSGA10IPQ3SY00 556 aa14.74□□□□□ -0.05
DDB1-209ENST00000537877 ADGRA1Q86SQ6 560 aa14.74□□□□□ -0.05
DDB1-209ENST00000537877 LCORLQ8N3X6 602 aa14.74□□□□□ -0.05
DDB1-209ENST00000537877 LARGE2Q8N3Y3 721 aa14.74□□□□□ -0.05
DDB1-209ENST00000537877 FBXW7Q969H0 707 aa14.74□□□□□ -0.05
DDB1-209ENST00000537877 RIOK1Q9BRS2 568 aaKnown RBP14.74□□□□□ -0.05
DDB1-209ENST00000537877 FHDC1Q9C0D6 1143 aaPredicted RBP14.74□□□□□ -0.05
DDB1-209ENST00000537877 ARMT1Q9H993 441 aa14.74□□□□□ -0.05
DDB1-209ENST00000537877 MROH7-TTC4A0A0A0MT08 1334 aa14.74□□□□□ -0.05
DDB1-209ENST00000537877 USP17L3A6NCW0 530 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 USP17L4A6NCW7 530 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 NFKBIEO00221 500 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 IARSP41252 1262 aaKnown RBP14.73□□□□□ -0.05
DDB1-209ENST00000537877 BECN1Q14457 450 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 KRT32Q14532 448 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 ALX1Q15699 326 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 USP17L1Q7RTZ2 530 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 MIGA1Q8NAN2 632 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 IPO9Q96P70 1041 aaKnown RBP14.73□□□□□ -0.05
DDB1-209ENST00000537877 NOL10Q9BSC4 688 aaKnown RBP14.73□□□□□ -0.05
DDB1-209ENST00000537877 ZNF277Q9NRM2 450 aaPredicted RBP14.73□□□□□ -0.05
DDB1-209ENST00000537877 COL4A5P29400 1685 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 PATL2C9JE40 543 aaKnown RBP14.73□□□□□ -0.05
DDB1-209ENST00000537877 GRIK5Q16478 980 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 DACT2Q5SW24 774 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 NIM1KQ8IY84 436 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 RASEFQ8IZ41 740 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 CERS5Q8N5B7 392 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 SNX21Q969T3 373 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 FAM163AQ96GL9 167 aaPredicted RBP14.73□□□□□ -0.05
DDB1-209ENST00000537877 NACAP1Q9BZK3 213 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 TM6SF1Q9BZW5 370 aa14.73□□□□□ -0.05
DDB1-209ENST00000537877 GAKO14976 1311 aa14.72□□□□□ -0.05
DDB1-209ENST00000537877 MYO3BQ8WXR4 1341 aa14.72□□□□□ -0.05
DDB1-209ENST00000537877 TIAM2Q8IVF5 1701 aa14.72□□□□□ -0.05
DDB1-209ENST00000537877 BAG3O95817 575 aa14.72□□□□□ -0.05
DDB1-209ENST00000537877 CYP21A2P08686 494 aa14.72□□□□□ -0.05
DDB1-209ENST00000537877 IMMTQ16891 758 aaKnown RBP14.72□□□□□ -0.05
DDB1-209ENST00000537877 CRNKL1Q9BZJ0 848 aaKnown RBP14.72□□□□□ -0.05
DDB1-209ENST00000537877 SLC4A4Q9Y6R1 1079 aa14.72□□□□□ -0.05
DDB1-209ENST00000537877 YDJCA8MPS7 323 aa14.71□□□□□ -0.06
DDB1-209ENST00000537877 GSG1L2A8MUP6 293 aa14.71□□□□□ -0.06
DDB1-209ENST00000537877 ST18O60284 1047 aa14.71□□□□□ -0.06
DDB1-209ENST00000537877 FGAP02671 866 aa14.71□□□□□ -0.06
DDB1-209ENST00000537877 APPP05067 770 aa14.71□□□□□ -0.06
DDB1-209ENST00000537877 PLCG2P16885 1265 aa14.71□□□□□ -0.06
DDB1-209ENST00000537877 PSMA5P28066 241 aa14.71□□□□□ -0.06
DDB1-209ENST00000537877 PPP4CP60510 307 aa14.71□□□□□ -0.06
DDB1-209ENST00000537877 DYNLL1P63167 89 aaKnown RBP14.71□□□□□ -0.06
DDB1-209ENST00000537877 DIXDC1Q155Q3 683 aa14.71□□□□□ -0.06
DDB1-209ENST00000537877 GIMAP6Q6P9H5 292 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms