RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 DPY19L2Q6NUT2 758 aa29.34■■■□□ 2.29
HMGA2-208ENST00000537429 KIAA0825Q8IV33 1275 aa29.34■■■□□ 2.29
HMGA2-208ENST00000537429 RFX7Q2KHR2 1363 aa29.34■■■□□ 2.29
HMGA2-208ENST00000537429 MYH7P12883 1935 aa29.33■■■□□ 2.29
HMGA2-208ENST00000537429 SLC9C2Q5TAH2 1124 aa29.33■■■□□ 2.29
HMGA2-208ENST00000537429 DZIP1Q86YF9 867 aaKnown RBP29.33■■■□□ 2.29
HMGA2-208ENST00000537429 TTF2Q9UNY4 1162 aaKnown RBP29.33■■■□□ 2.29
HMGA2-208ENST00000537429 F8W031 263 aaPredicted RBP29.32■■■□□ 2.28
HMGA2-208ENST00000537429 ADD2P35612 726 aa29.32■■■□□ 2.28
HMGA2-208ENST00000537429 LRRFIP1Q32MZ4 808 aaKnown RBP29.32■■■□□ 2.28
HMGA2-208ENST00000537429 ZSCAN25Q6NSZ9 544 aa29.32■■■□□ 2.28
HMGA2-208ENST00000537429 DPF2Q92785 391 aa29.32■■■□□ 2.28
HMGA2-208ENST00000537429 MAST2Q6P0Q8 1798 aa29.32■■■□□ 2.28
HMGA2-208ENST00000537429 DDNO94850 711 aaPredicted RBP29.31■■■□□ 2.28
HMGA2-208ENST00000537429 CHGBP05060 677 aa29.31■■■□□ 2.28
HMGA2-208ENST00000537429 ZFYP08048 801 aaPredicted RBP29.31■■■□□ 2.28
HMGA2-208ENST00000537429 PDE6AP16499 860 aa29.31■■■□□ 2.28
HMGA2-208ENST00000537429 TMED8Q6PL24 325 aaPredicted RBP29.31■■■□□ 2.28
HMGA2-208ENST00000537429 MAGEB6Q8N7X4 407 aa29.31■■■□□ 2.28
HMGA2-208ENST00000537429 MAST3O60307 1309 aa29.31■■■□□ 2.28
HMGA2-208ENST00000537429 TCRBV5S4A2TA0A5A2 114 aa29.3■■■□□ 2.28
HMGA2-208ENST00000537429 GMPSP49915 693 aaPredicted RBP29.3■■■□□ 2.28
HMGA2-208ENST00000537429 RNF113AO15541 343 aaKnown RBP29.3■■■□□ 2.28
HMGA2-208ENST00000537429 UBE3CQ15386 1083 aa29.3■■■□□ 2.28
HMGA2-208ENST00000537429 NAA16Q6N069 864 aaPredicted RBP29.3■■■□□ 2.28
HMGA2-208ENST00000537429 MRIQ9BWK5 157 aa29.3■■■□□ 2.28
HMGA2-208ENST00000537429 SLFNL1Q499Z3 407 aa29.29■■■□□ 2.28
HMGA2-208ENST00000537429 ZNF532Q9HCE3 1301 aa29.28■■■□□ 2.28
HMGA2-208ENST00000537429 GLTPD2A6NH11 291 aa29.28■■■□□ 2.28
HMGA2-208ENST00000537429 USP17L8P0C7I0 530 aa29.28■■■□□ 2.28
HMGA2-208ENST00000537429 SCNN1DP51172 638 aa29.28■■■□□ 2.28
HMGA2-208ENST00000537429 GSTO1P78417 241 aa29.28■■■□□ 2.28
HMGA2-208ENST00000537429 HDLBPQ00341 1268 aaKnown RBP29.28■■■□□ 2.28
HMGA2-208ENST00000537429 DIXDC1Q155Q3 683 aa29.28■■■□□ 2.28
HMGA2-208ENST00000537429 FAM163AQ96GL9 167 aaPredicted RBP29.28■■■□□ 2.28
HMGA2-208ENST00000537429 HIP1O00291 1037 aa29.27■■■□□ 2.28
HMGA2-208ENST00000537429 CYP7A1P22680 504 aa29.27■■■□□ 2.28
HMGA2-208ENST00000537429 CHMLP26374 656 aa29.27■■■□□ 2.28
HMGA2-208ENST00000537429 MMP14P50281 582 aa29.27■■■□□ 2.28
HMGA2-208ENST00000537429 OGFOD1Q8N543 542 aa29.27■■■□□ 2.28
HMGA2-208ENST00000537429 ADGRA1Q86SQ6 560 aa29.26■■■□□ 2.27
HMGA2-208ENST00000537429 SLF2Q8IX21 1173 aa29.26■■■□□ 2.27
HMGA2-208ENST00000537429 SERPINA10Q9UK55 444 aa29.26■■■□□ 2.27
HMGA2-208ENST00000537429 HDAC9Q9UKV0 1011 aa29.26■■■□□ 2.27
HMGA2-208ENST00000537429 MYH2Q9UKX2 1941 aa29.26■■■□□ 2.27
HMGA2-208ENST00000537429 LDHCP07864 332 aa29.25■■■□□ 2.27
HMGA2-208ENST00000537429 ZMYM1Q5SVZ6 1142 aa29.25■■■□□ 2.27
HMGA2-208ENST00000537429 HHIPL2Q6UWX4 724 aa29.25■■■□□ 2.27
HMGA2-208ENST00000537429 APPBP2Q92624 585 aa29.25■■■□□ 2.27
HMGA2-208ENST00000537429 CNOT7Q9UIV1 285 aaKnown RBP29.25■■■□□ 2.27
HMGA2-208ENST00000537429 GAKO14976 1311 aa29.25■■■□□ 2.27
HMGA2-208ENST00000537429 CDC45O75419 566 aa29.25■■■□□ 2.27
HMGA2-208ENST00000537429 CRKP46108 304 aa29.25■■■□□ 2.27
HMGA2-208ENST00000537429 ZNF280AP59817 542 aaPredicted RBP29.25■■■□□ 2.27
HMGA2-208ENST00000537429 TEKT1Q969V4 418 aa29.25■■■□□ 2.27
HMGA2-208ENST00000537429 DIAPH3Q9NSV4 1193 aa29.25■■■□□ 2.27
HMGA2-208ENST00000537429 GPRC5DQ9NZD1 345 aa29.25■■■□□ 2.27
HMGA2-208ENST00000537429 MROH7-TTC4A0A0A0MT08 1334 aa29.24■■■□□ 2.27
HMGA2-208ENST00000537429 OSBP2Q969R2 916 aa29.24■■■□□ 2.27
HMGA2-208ENST00000537429 L3MBTL3Q96JM7 780 aaPredicted RBP29.24■■■□□ 2.27
HMGA2-208ENST00000537429 FAM227BQ96M60 508 aa29.24■■■□□ 2.27
HMGA2-208ENST00000537429 SHTN1A0MZ66 631 aa29.23■■■□□ 2.27
HMGA2-208ENST00000537429 NMIQ13287 307 aaPredicted RBP29.23■■■□□ 2.27
HMGA2-208ENST00000537429 MICALL2Q8IY33 904 aa29.23■■■□□ 2.27
HMGA2-208ENST00000537429 DAGLAQ9Y4D2 1042 aa29.23■■■□□ 2.27
HMGA2-208ENST00000537429 ADAMTSL1Q8N6G6 1762 aa29.22■■■□□ 2.27
HMGA2-208ENST00000537429 LMOD1P29536 600 aaPredicted RBP29.22■■■□□ 2.27
HMGA2-208ENST00000537429 ZDHHC15Q96MV8 337 aa29.22■■■□□ 2.27
HMGA2-208ENST00000537429 PUS7LQ9H0K6 701 aaKnown RBP29.22■■■□□ 2.27
HMGA2-208ENST00000537429 A0A0D9SFI3 127 aa29.21■■■□□ 2.27
HMGA2-208ENST00000537429 CWC27Q6UX04 472 aaKnown RBP29.21■■■□□ 2.27
HMGA2-208ENST00000537429 SEC62Q99442 399 aaKnown RBP29.21■■■□□ 2.27
HMGA2-208ENST00000537429 HELLSQ9NRZ9 838 aa29.21■■■□□ 2.27
HMGA2-208ENST00000537429 GPR75-ASB3A0A0A6YYF3 556 aa29.2■■■□□ 2.27
HMGA2-208ENST00000537429 RBM5P52756 815 aaKnown RBP eCLIP29.2■■■□□ 2.27
HMGA2-208ENST00000537429 CFAP100Q494V2 611 aa29.2■■■□□ 2.27
HMGA2-208ENST00000537429 MTMR14Q8NCE2 650 aa29.2■■■□□ 2.27
HMGA2-208ENST00000537429 MYOZ2Q9NPC6 264 aa29.2■■■□□ 2.27
HMGA2-208ENST00000537429 H7C1D1 291 aa29.2■■■□□ 2.26
HMGA2-208ENST00000537429 PCDHAC2Q9Y5I4 1007 aa29.2■■■□□ 2.26
HMGA2-208ENST00000537429 EPS15P42566 896 aa29.19■■■□□ 2.26
HMGA2-208ENST00000537429 PPP4CP60510 307 aa29.19■■■□□ 2.26
HMGA2-208ENST00000537429 MCMDC2Q4G0Z9 681 aa29.19■■■□□ 2.26
HMGA2-208ENST00000537429 APOBEC3HQ6NTF7 200 aaKnown RBP29.19■■■□□ 2.26
HMGA2-208ENST00000537429 MIGA1Q8NAN2 632 aa29.19■■■□□ 2.26
HMGA2-208ENST00000537429 RIOK1Q9BRS2 568 aaKnown RBP29.19■■■□□ 2.26
HMGA2-208ENST00000537429 M0R2C6 588 aa29.18■■■□□ 2.26
HMGA2-208ENST00000537429 CASC1Q6TDU7 716 aa29.18■■■□□ 2.26
HMGA2-208ENST00000537429 RUFY2Q8WXA3 655 aa29.18■■■□□ 2.26
HMGA2-208ENST00000537429 AATFQ9NY61 560 aaKnown RBP eCLIP29.18■■■□□ 2.26
HMGA2-208ENST00000537429 WDR90Q96KV7 1748 aa29.17■■■□□ 2.26
HMGA2-208ENST00000537429 MAGEB6P1A0A0J9YX57 407 aa29.17■■■□□ 2.26
HMGA2-208ENST00000537429 BAG3O95817 575 aa29.17■■■□□ 2.26
HMGA2-208ENST00000537429 BTDP43251 543 aa29.17■■■□□ 2.26
HMGA2-208ENST00000537429 DLGAP5Q15398 846 aa29.17■■■□□ 2.26
HMGA2-208ENST00000537429 ZNF526Q8TF50 670 aaPredicted RBP29.17■■■□□ 2.26
HMGA2-208ENST00000537429 ZBED3Q96IU2 234 aaPredicted RBP29.17■■■□□ 2.26
HMGA2-208ENST00000537429 PRMT6Q96LA8 375 aaPredicted RBP29.17■■■□□ 2.26
HMGA2-208ENST00000537429 IL25Q9H293 177 aa29.17■■■□□ 2.26
HMGA2-208ENST00000537429 SPDYE2BA6NHP3 402 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms