RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 E4F1Q66K89 784 aaPredicted RBP12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 MYO5BQ9ULV0 1848 aa12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 CHUKO15111 745 aa12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 CRYMQ14894 314 aa12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 R3HDM1Q15032 1099 aaKnown RBP12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 TMC6Q7Z403 805 aa12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 ZSCAN31Q96LW9 406 aaPredicted RBP12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 BICC1Q9H694 974 aaKnown RBP12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 CPSF1Q10570 1443 aaKnown RBP12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 OSBPL5Q9H0X9 879 aaPredicted RBP12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 C9orf78Q9NZ63 289 aaPredicted RBP12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 ODF2LQ9ULJ1 636 aa12.47□□□□□ -0.41
CLSTN3-207ENST00000537408 CPDO75976 1380 aa12.46□□□□□ -0.41
CLSTN3-207ENST00000537408 AIMP1Q12904 312 aaKnown RBP12.46□□□□□ -0.41
CLSTN3-207ENST00000537408 RILPL2Q969X0 211 aa12.46□□□□□ -0.41
CLSTN3-207ENST00000537408 CDR1P51861 262 aa12.46□□□□□ -0.41
CLSTN3-207ENST00000537408 TAF7Q15545 349 aaPredicted RBP12.46□□□□□ -0.41
CLSTN3-207ENST00000537408 TTC19Q6DKK2 380 aaPredicted RBP12.46□□□□□ -0.41
CLSTN3-207ENST00000537408 PALD1Q9ULE6 856 aa12.46□□□□□ -0.41
CLSTN3-207ENST00000537408 NWD1Q149M9 1564 aa12.46□□□□□ -0.41
CLSTN3-207ENST00000537408 KIF1AQ12756 1690 aa12.46□□□□□ -0.41
CLSTN3-207ENST00000537408 USP31Q70CQ4 1352 aa12.46□□□□□ -0.41
CLSTN3-207ENST00000537408 CLNS1AP54105 237 aaKnown RBP12.46□□□□□ -0.42
CLSTN3-207ENST00000537408 OTUD7AQ8TE49 926 aaPredicted RBP12.46□□□□□ -0.42
CLSTN3-207ENST00000537408 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.46□□□□□ -0.42
CLSTN3-207ENST00000537408 ERVV-2B6SEH9 535 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 EPB41L2O43491 1005 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 MSL3Q8N5Y2 521 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 RBBP5Q15291 538 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 RIC3Q7Z5B4 369 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 KIAA1328Q86T90 577 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 MTMR6Q9Y217 621 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 MAP2K7O14733 419 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 TUBBP07437 444 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 HDGFL1Q5TGJ6 251 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 FBXW10Q5XX13 1052 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 SH2B1Q9NRF2 756 aaPredicted RBP12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 ETAA1Q9NY74 926 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 MIS18AQ9NYP9 233 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 SCRN1Q12765 414 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 LARP1BQ659C4 914 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 FAM204AQ9H8W3 233 aa12.45□□□□□ -0.42
CLSTN3-207ENST00000537408 TXNRD1Q16881 649 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 SLC27A3Q5K4L6 730 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 ARMC2Q8NEN0 867 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 PLEKHA4Q9H4M7 779 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 AKAP2Q9Y2D5 859 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 PES1O00541 588 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 RBM43Q6ZSC3 357 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 FAM169AQ9Y6X4 670 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 PHACTR2O75167 634 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 GNG11P61952 73 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 CCDC83Q8IWF9 413 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 FAM177A1Q8N128 213 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 OTUD6BQ8N6M0 293 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 HNRNPLLQ8WVV9 542 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 CAPN7Q9Y6W3 813 aa12.44□□□□□ -0.42
CLSTN3-207ENST00000537408 EZRP15311 586 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 GPTP24298 496 aa12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 CCDC73Q6ZRK6 1079 aa12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 WWC2Q6AWC2 1192 aa12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 PAX7P23759 505 aa12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 GCKP35557 465 aa12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 IQCA1Q86XH1 822 aa12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 EPC1Q9H2F5 836 aa12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 CHD2O14647 1828 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 ABCC4O15439 1325 aa12.43□□□□□ -0.42
CLSTN3-207ENST00000537408 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 PDE1AP54750 535 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 CPLX2Q6PUV4 134 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 MICALCLQ6ZW33 695 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 MCM8Q9UJA3 840 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 MYO6Q9UM54 1294 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 AXIN2Q9Y2T1 843 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 RWDD2BP57060 319 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 KINO60870 393 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 DDR1Q08345 913 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 ADCY2Q08462 1091 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 IQCB1Q15051 598 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 FCHSD1Q86WN1 690 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 AK2P54819 239 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 CHMP4BP1P59074 171 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 KAT2BQ92831 832 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 IRAK4Q9NWZ3 460 aa12.42□□□□□ -0.42
CLSTN3-207ENST00000537408 CCT5P48643 541 aa12.41□□□□□ -0.42
CLSTN3-207ENST00000537408 TRAF1Q13077 416 aa12.41□□□□□ -0.42
CLSTN3-207ENST00000537408 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
CLSTN3-207ENST00000537408 B4GALNT4Q76KP1 1039 aa12.41□□□□□ -0.42
CLSTN3-207ENST00000537408 AOPEPQ8N6M6 819 aa12.41□□□□□ -0.42
CLSTN3-207ENST00000537408 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
CLSTN3-207ENST00000537408 ISM2Q6H9L7 571 aa12.41□□□□□ -0.42
CLSTN3-207ENST00000537408 RSRC2Q7L4I2 434 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-207ENST00000537408 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms