RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 CHAF1AQ13111 956 aaPredicted RBP14.51□□□□□ -0.09
CLIP1-208ENST00000537004 GRIK5Q16478 980 aa14.51□□□□□ -0.09
CLIP1-208ENST00000537004 CAVIN4Q5BKX8 364 aa14.51□□□□□ -0.09
CLIP1-208ENST00000537004 PSME4Q14997 1843 aa14.5□□□□□ -0.09
CLIP1-208ENST00000537004 FRAT2O75474 233 aaPredicted RBP14.5□□□□□ -0.09
CLIP1-208ENST00000537004 GRM1Q13255 1194 aa14.5□□□□□ -0.09
CLIP1-208ENST00000537004 DEFB115Q30KQ5 88 aa14.5□□□□□ -0.09
CLIP1-208ENST00000537004 MFSD14BQ5SR56 506 aa14.5□□□□□ -0.09
CLIP1-208ENST00000537004 SULF1Q8IWU6 871 aa14.5□□□□□ -0.09
CLIP1-208ENST00000537004 CEP126Q9P2H0 1117 aa14.5□□□□□ -0.09
CLIP1-208ENST00000537004 AOX1Q06278 1338 aa14.5□□□□□ -0.09
CLIP1-208ENST00000537004 ZNF646O15015 1829 aaPredicted RBP14.5□□□□□ -0.09
CLIP1-208ENST00000537004 IFIT1P09914 478 aaKnown RBP14.49□□□□□ -0.09
CLIP1-208ENST00000537004 LPIN2Q92539 896 aa14.49□□□□□ -0.09
CLIP1-208ENST00000537004 FAM205AQ6ZU69 1335 aa14.49□□□□□ -0.09
CLIP1-208ENST00000537004 RASSF10A6NK89 507 aa14.49□□□□□ -0.09
CLIP1-208ENST00000537004 EIF5BO60841 1220 aaKnown RBP14.49□□□□□ -0.09
CLIP1-208ENST00000537004 IL15P40933 162 aaPredicted RBP14.49□□□□□ -0.09
CLIP1-208ENST00000537004 TIMM10P62072 90 aa14.49□□□□□ -0.09
CLIP1-208ENST00000537004 ATP2B3Q16720 1220 aa14.49□□□□□ -0.09
CLIP1-208ENST00000537004 PAXIP1Q6ZW49 1069 aaPredicted RBP14.49□□□□□ -0.09
CLIP1-208ENST00000537004 SAPCD2Q86UD0 394 aa14.49□□□□□ -0.09
CLIP1-208ENST00000537004 IL1RAPL2Q9NP60 686 aa14.49□□□□□ -0.09
CLIP1-208ENST00000537004 SLC5A1P13866 664 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 ADORA1P30542 326 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 TFCP2Q12800 502 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 HSP90AB4PQ58FF6 505 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 TSHZ3Q63HK5 1081 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 CYP4F22Q6NT55 531 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 RHPN1Q8TCX5 695 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 STAP2Q9UGK3 403 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 HDAC9Q9UKV0 1011 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 POLR2AP24928 1970 aaKnown RBP14.48□□□□□ -0.09
CLIP1-208ENST00000537004 NBR1Q14596 966 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 CASC1Q6TDU7 716 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 KIF1BPQ96EK5 621 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 ZBED3Q96IU2 234 aaPredicted RBP14.48□□□□□ -0.09
CLIP1-208ENST00000537004 TBC1D2Q9BYX2 928 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 TLL2Q9Y6L7 1015 aa14.48□□□□□ -0.09
CLIP1-208ENST00000537004 DLGAP5Q15398 846 aa14.47□□□□□ -0.09
CLIP1-208ENST00000537004 CFAP100Q494V2 611 aa14.47□□□□□ -0.09
CLIP1-208ENST00000537004 CDCA5Q96FF9 252 aa14.47□□□□□ -0.09
CLIP1-208ENST00000537004 PRMT6Q96LA8 375 aaPredicted RBP14.47□□□□□ -0.09
CLIP1-208ENST00000537004 TTF2Q9UNY4 1162 aaKnown RBP14.47□□□□□ -0.09
CLIP1-208ENST00000537004 PHKA1P46020 1223 aa14.46□□□□□ -0.09
CLIP1-208ENST00000537004 RBM5P52756 815 aaKnown RBP eCLIP14.46□□□□□ -0.09
CLIP1-208ENST00000537004 FKBP1AP62942 108 aaKnown RBP14.46□□□□□ -0.09
CLIP1-208ENST00000537004 CLRN2A0PK11 232 aa14.46□□□□□ -0.1
CLIP1-208ENST00000537004 OS9Q13438 667 aaPredicted RBP14.46□□□□□ -0.1
CLIP1-208ENST00000537004 SPDYE2BA6NHP3 402 aa14.45□□□□□ -0.1
CLIP1-208ENST00000537004 SPDYE6P0CI01 402 aa14.45□□□□□ -0.1
CLIP1-208ENST00000537004 HUNKP57058 714 aa14.45□□□□□ -0.1
CLIP1-208ENST00000537004 MOB2Q70IA6 237 aa14.45□□□□□ -0.1
CLIP1-208ENST00000537004 CAPNS2Q96L46 248 aa14.45□□□□□ -0.1
CLIP1-208ENST00000537004 WDR33Q9C0J8 1336 aaKnown RBP14.45□□□□□ -0.1
CLIP1-208ENST00000537004 GBA2Q9HCG7 927 aaPredicted RBP14.45□□□□□ -0.1
CLIP1-208ENST00000537004 COL1A1P02452 1464 aaPredicted RBP14.44□□□□□ -0.1
CLIP1-208ENST00000537004 PITPNM2Q9BZ72 1349 aa14.44□□□□□ -0.1
CLIP1-208ENST00000537004 A0A1B0GUL7 405 aa14.44□□□□□ -0.1
CLIP1-208ENST00000537004 HSPA1AP0DMV8 641 aaKnown RBP14.44□□□□□ -0.1
CLIP1-208ENST00000537004 HSPA1BP0DMV9 641 aaKnown RBP14.44□□□□□ -0.1
CLIP1-208ENST00000537004 AOC2O75106 756 aa14.44□□□□□ -0.1
CLIP1-208ENST00000537004 G3BP1Q13283 466 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLIP1-208ENST00000537004 KIF2CQ99661 725 aa14.44□□□□□ -0.1
CLIP1-208ENST00000537004 FZD1Q9UP38 647 aa14.44□□□□□ -0.1
CLIP1-208ENST00000537004 CCDC102BQ68D86 513 aa14.43□□□□□ -0.1
CLIP1-208ENST00000537004 ERC1Q8IUD2 1116 aa14.43□□□□□ -0.1
CLIP1-208ENST00000537004 MTMR14Q8NCE2 650 aa14.43□□□□□ -0.1
CLIP1-208ENST00000537004 XAGE2Q96GT9 111 aa14.43□□□□□ -0.1
CLIP1-208ENST00000537004 NEUROD6Q96NK8 337 aa14.43□□□□□ -0.1
CLIP1-208ENST00000537004 VEZTQ9HBM0 779 aa14.43□□□□□ -0.1
CLIP1-208ENST00000537004 TRIM6-TRIM34B2RNG4 842 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 DEKP35659 375 aaKnown RBP14.42□□□□□ -0.1
CLIP1-208ENST00000537004 CRKP46108 304 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 MMP14P50281 582 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 C2orf69Q8N8R5 385 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 ZIC5Q96T25 663 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 DEFB129Q9H1M3 183 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 TDRD3Q9H7E2 651 aaKnown RBP14.42□□□□□ -0.1
CLIP1-208ENST00000537004 TRPM7Q96QT4 1865 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 PRDX5P30044 214 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 PRKG1Q13976 671 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 TBC1D22AQ8WUA7 517 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 USP26Q9BXU7 913 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 SERPINA10Q9UK55 444 aa14.42□□□□□ -0.1
CLIP1-208ENST00000537004 ERC2O15083 957 aa14.41□□□□□ -0.1
CLIP1-208ENST00000537004 REC8O95072 547 aa14.41□□□□□ -0.1
CLIP1-208ENST00000537004 RASGRF1Q13972 1273 aa14.41□□□□□ -0.1
CLIP1-208ENST00000537004 CLASRPQ8N2M8 674 aaKnown RBP14.41□□□□□ -0.1
CLIP1-208ENST00000537004 RILPL2Q969X0 211 aa14.41□□□□□ -0.1
CLIP1-208ENST00000537004 CACNB3P54284 484 aa14.41□□□□□ -0.1
CLIP1-208ENST00000537004 PI16Q6UXB8 463 aa14.41□□□□□ -0.1
CLIP1-208ENST00000537004 APOBEC3FQ8IUX4 373 aaKnown RBP14.41□□□□□ -0.1
CLIP1-208ENST00000537004 HSCBQ8IWL3 235 aa14.41□□□□□ -0.1
CLIP1-208ENST00000537004 PI4K2BQ8TCG2 481 aa14.41□□□□□ -0.1
CLIP1-208ENST00000537004 SNX21Q969T3 373 aa14.41□□□□□ -0.1
CLIP1-208ENST00000537004 AKAP2Q9Y2D5 859 aa14.41□□□□□ -0.1
CLIP1-208ENST00000537004 UBE2Q2LH0YL09 131 aa14.4□□□□□ -0.1
CLIP1-208ENST00000537004 MYO1BO43795 1136 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms