RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 RASA3Q14644 834 aa16.45■□□□□ 0.22
MRPS35-202ENST00000536569 SPRYD7Q5W111 196 aa16.45■□□□□ 0.22
MRPS35-202ENST00000536569 SLC10A4Q96EP9 437 aa16.45■□□□□ 0.22
MRPS35-202ENST00000536569 IPO8O15397 1037 aaKnown RBP16.44■□□□□ 0.22
MRPS35-202ENST00000536569 ALDH1A1P00352 501 aa16.44■□□□□ 0.22
MRPS35-202ENST00000536569 TNNI2P48788 182 aa16.44■□□□□ 0.22
MRPS35-202ENST00000536569 BCAMP50895 628 aa16.44■□□□□ 0.22
MRPS35-202ENST00000536569 PRKG1Q13976 671 aa16.44■□□□□ 0.22
MRPS35-202ENST00000536569 INTS3Q68E01 1043 aaKnown RBP16.44■□□□□ 0.22
MRPS35-202ENST00000536569 ATG9AQ7Z3C6 839 aa16.44■□□□□ 0.22
MRPS35-202ENST00000536569 TEKT1Q969V4 418 aa16.44■□□□□ 0.22
MRPS35-202ENST00000536569 SSC5DA1L4H1 1573 aa16.43■□□□□ 0.22
MRPS35-202ENST00000536569 MANSC4A6NHS7 340 aaPredicted RBP16.43■□□□□ 0.22
MRPS35-202ENST00000536569 GNAI3P08754 354 aa16.43■□□□□ 0.22
MRPS35-202ENST00000536569 IL15P40933 162 aaPredicted RBP16.43■□□□□ 0.22
MRPS35-202ENST00000536569 CHAF1AQ13111 956 aaPredicted RBP16.43■□□□□ 0.22
MRPS35-202ENST00000536569 NBPF12Q5TAG4 269 aaPredicted RBP16.43■□□□□ 0.22
MRPS35-202ENST00000536569 WDR66Q8TBY9 1149 aa16.43■□□□□ 0.22
MRPS35-202ENST00000536569 ZDHHC15Q96MV8 337 aa16.43■□□□□ 0.22
MRPS35-202ENST00000536569 TDRD3Q9H7E2 651 aaKnown RBP16.43■□□□□ 0.22
MRPS35-202ENST00000536569 CEP126Q9P2H0 1117 aa16.43■□□□□ 0.22
MRPS35-202ENST00000536569 CCDC85CA6NKD9 419 aa16.42■□□□□ 0.22
MRPS35-202ENST00000536569 FKBP1CQ5VVH2 108 aa16.42■□□□□ 0.22
MRPS35-202ENST00000536569 HHIPL2Q6UWX4 724 aa16.42■□□□□ 0.22
MRPS35-202ENST00000536569 CTU1Q7Z7A3 348 aaKnown RBP16.42■□□□□ 0.22
MRPS35-202ENST00000536569 ANKRD13AQ8IZ07 590 aa16.42■□□□□ 0.22
MRPS35-202ENST00000536569 COPRSQ9NQ92 184 aa16.42■□□□□ 0.22
MRPS35-202ENST00000536569 GNL3LQ9NVN8 582 aaKnown RBP16.42■□□□□ 0.22
MRPS35-202ENST00000536569 IQSEC3Q9UPP2 1182 aaPredicted RBP16.42■□□□□ 0.22
MRPS35-202ENST00000536569 LRRFIP2Q9Y608 721 aaKnown RBP16.42■□□□□ 0.22
MRPS35-202ENST00000536569 AOX1Q06278 1338 aa16.42■□□□□ 0.22
MRPS35-202ENST00000536569 USP2O75604 605 aaPredicted RBP16.41■□□□□ 0.22
MRPS35-202ENST00000536569 RGS19P49795 217 aa16.41■□□□□ 0.22
MRPS35-202ENST00000536569 PKN2Q16513 984 aaKnown RBP16.41■□□□□ 0.22
MRPS35-202ENST00000536569 WNK4Q96J92 1243 aa16.41■□□□□ 0.22
MRPS35-202ENST00000536569 TEPSINQ96N21 525 aa16.41■□□□□ 0.22
MRPS35-202ENST00000536569 SEMA3EO15041 775 aa16.4■□□□□ 0.22
MRPS35-202ENST00000536569 MTX1Q13505 466 aa16.4■□□□□ 0.22
MRPS35-202ENST00000536569 ATP2B3Q16720 1220 aa16.4■□□□□ 0.22
MRPS35-202ENST00000536569 FAM83AQ86UY5 434 aa16.4■□□□□ 0.22
MRPS35-202ENST00000536569 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
MRPS35-202ENST00000536569 MEIS3Q99687 375 aa16.4■□□□□ 0.22
MRPS35-202ENST00000536569 TMOD2Q9NZR1 351 aa16.4■□□□□ 0.22
MRPS35-202ENST00000536569 LAMB1P07942 1786 aa16.39■□□□□ 0.21
MRPS35-202ENST00000536569 MKRN3Q13064 507 aaKnown RBP16.39■□□□□ 0.21
MRPS35-202ENST00000536569 GRIK5Q16478 980 aa16.39■□□□□ 0.21
MRPS35-202ENST00000536569 ATF7IPQ6VMQ6 1270 aa16.39■□□□□ 0.21
MRPS35-202ENST00000536569 SIL1Q9H173 461 aa16.39■□□□□ 0.21
MRPS35-202ENST00000536569 SALL1Q9NSC2 1324 aa16.39■□□□□ 0.21
MRPS35-202ENST00000536569 TCP10L2B9ZVM9 353 aa16.38■□□□□ 0.21
MRPS35-202ENST00000536569 GPR25O00155 361 aa16.38■□□□□ 0.21
MRPS35-202ENST00000536569 TBC1D8O95759 1140 aa16.38■□□□□ 0.21
MRPS35-202ENST00000536569 OTUD7BQ6GQQ9 843 aa16.38■□□□□ 0.21
MRPS35-202ENST00000536569 APOBEC3HQ6NTF7 200 aaKnown RBP16.38■□□□□ 0.21
MRPS35-202ENST00000536569 IFNL1Q8IU54 200 aa16.38■□□□□ 0.21
MRPS35-202ENST00000536569 ZNF296Q8WUU4 475 aaPredicted RBP16.38■□□□□ 0.21
MRPS35-202ENST00000536569 CLMNQ96JQ2 1002 aa16.38■□□□□ 0.21
MRPS35-202ENST00000536569 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
MRPS35-202ENST00000536569 FZD1Q9UP38 647 aa16.38■□□□□ 0.21
MRPS35-202ENST00000536569 TRIM27P14373 513 aa16.37■□□□□ 0.21
MRPS35-202ENST00000536569 ZGPATQ8N5A5 531 aaKnown RBP16.37■□□□□ 0.21
MRPS35-202ENST00000536569 TMEM39BQ9GZU3 492 aa16.37■□□□□ 0.21
MRPS35-202ENST00000536569 AKAP2Q9Y2D5 859 aa16.37■□□□□ 0.21
MRPS35-202ENST00000536569 PDS5AQ29RF7 1337 aaKnown RBP16.37■□□□□ 0.21
MRPS35-202ENST00000536569 RPAP1Q9BWH6 1393 aaPredicted RBP16.37■□□□□ 0.21
MRPS35-202ENST00000536569 TESPA1A2RU30 521 aaPredicted RBP16.36■□□□□ 0.21
MRPS35-202ENST00000536569 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
MRPS35-202ENST00000536569 FKTNO75072 461 aa16.36■□□□□ 0.21
MRPS35-202ENST00000536569 MAP3K9P80192 1104 aa16.36■□□□□ 0.21
MRPS35-202ENST00000536569 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.36■□□□□ 0.21
MRPS35-202ENST00000536569 GNAI2P04899 355 aa16.35■□□□□ 0.21
MRPS35-202ENST00000536569 LDHBP07195 334 aaKnown RBP16.35■□□□□ 0.21
MRPS35-202ENST00000536569 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.35■□□□□ 0.21
MRPS35-202ENST00000536569 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
MRPS35-202ENST00000536569 CSADQ9Y600 493 aa16.35■□□□□ 0.21
MRPS35-202ENST00000536569 MYH13Q9UKX3 1938 aa16.35■□□□□ 0.21
MRPS35-202ENST00000536569 BCAR3O75815 825 aa16.34■□□□□ 0.21
MRPS35-202ENST00000536569 MLLT1Q03111 559 aaPredicted RBP16.34■□□□□ 0.21
MRPS35-202ENST00000536569 DCAF15Q66K64 600 aa16.34■□□□□ 0.21
MRPS35-202ENST00000536569 OPTNQ96CV9 577 aa16.34■□□□□ 0.21
MRPS35-202ENST00000536569 IGF2BP3O00425 579 aaKnown RBP eCLIP16.33■□□□□ 0.2
MRPS35-202ENST00000536569 GJA5P36382 358 aa16.33■□□□□ 0.2
MRPS35-202ENST00000536569 PHKA1P46020 1223 aa16.33■□□□□ 0.2
MRPS35-202ENST00000536569 GTF2A2P52657 109 aa16.33■□□□□ 0.2
MRPS35-202ENST00000536569 VGLL4Q14135 290 aa16.33■□□□□ 0.2
MRPS35-202ENST00000536569 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.2
MRPS35-202ENST00000536569 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
MRPS35-202ENST00000536569 CCDC102BQ68D86 513 aa16.33■□□□□ 0.2
MRPS35-202ENST00000536569 CDAN1Q8IWY9 1227 aa16.33■□□□□ 0.2
MRPS35-202ENST00000536569 FAM151AQ8WW52 585 aa16.33■□□□□ 0.2
MRPS35-202ENST00000536569 FRAT1Q92837 279 aaPredicted RBP16.33■□□□□ 0.2
MRPS35-202ENST00000536569 ELP3Q9H9T3 547 aa16.33■□□□□ 0.2
MRPS35-202ENST00000536569 DAGLAQ9Y4D2 1042 aa16.33■□□□□ 0.2
MRPS35-202ENST00000536569 PRDX5P30044 214 aa16.32■□□□□ 0.2
MRPS35-202ENST00000536569 CACNB3P54284 484 aa16.32■□□□□ 0.2
MRPS35-202ENST00000536569 MVPQ14764 893 aaKnown RBP16.32■□□□□ 0.2
MRPS35-202ENST00000536569 SLF2Q8IX21 1173 aa16.32■□□□□ 0.2
MRPS35-202ENST00000536569 MS4A4AQ96JQ5 239 aa16.32■□□□□ 0.2
MRPS35-202ENST00000536569 OTOFQ9HC10 1997 aa16.32■□□□□ 0.2
MRPS35-202ENST00000536569 A0A1B0GUL7 405 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms