RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 C2orf69Q8N8R5 385 aa16.26■□□□□ 0.19
PRKDC-206ENST00000536429 WDR66Q8TBY9 1149 aa16.26■□□□□ 0.19
PRKDC-206ENST00000536429 DEFB129Q9H1M3 183 aa16.26■□□□□ 0.19
PRKDC-206ENST00000536429 TDRD3Q9H7E2 651 aaKnown RBP16.26■□□□□ 0.19
PRKDC-206ENST00000536429 EXOC6BQ9Y2D4 811 aa16.26■□□□□ 0.19
PRKDC-206ENST00000536429 FPGT-TNNI3KV9GXZ4 949 aa16.26■□□□□ 0.19
PRKDC-206ENST00000536429 DIXDC1Q155Q3 683 aa16.25■□□□□ 0.19
PRKDC-206ENST00000536429 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
PRKDC-206ENST00000536429 PI16Q6UXB8 463 aa16.25■□□□□ 0.19
PRKDC-206ENST00000536429 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
PRKDC-206ENST00000536429 ZNF70Q9UC06 446 aaPredicted RBP16.25■□□□□ 0.19
PRKDC-206ENST00000536429 DENND2AQ9ULE3 1009 aa16.25■□□□□ 0.19
PRKDC-206ENST00000536429 FZD1Q9UP38 647 aa16.25■□□□□ 0.19
PRKDC-206ENST00000536429 SEMA3EO15041 775 aa16.24■□□□□ 0.19
PRKDC-206ENST00000536429 CACNB3P54284 484 aa16.24■□□□□ 0.19
PRKDC-206ENST00000536429 APOBEC3HQ6NTF7 200 aaKnown RBP16.24■□□□□ 0.19
PRKDC-206ENST00000536429 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
PRKDC-206ENST00000536429 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.24■□□□□ 0.19
PRKDC-206ENST00000536429 TEKT1Q969V4 418 aa16.24■□□□□ 0.19
PRKDC-206ENST00000536429 HHIPL1Q96JK4 782 aa16.24■□□□□ 0.19
PRKDC-206ENST00000536429 DBNDD2Q9BQY9 259 aa16.24■□□□□ 0.19
PRKDC-206ENST00000536429 TLR7Q9NYK1 1049 aaKnown RBP16.24■□□□□ 0.19
PRKDC-206ENST00000536429 SUGT1Q9Y2Z0 365 aa16.24■□□□□ 0.19
PRKDC-206ENST00000536429 ARAP2Q8WZ64 1704 aa16.24■□□□□ 0.19
PRKDC-206ENST00000536429 SALL1Q9NSC2 1324 aa16.23■□□□□ 0.19
PRKDC-206ENST00000536429 SSC5DA1L4H1 1573 aa16.23■□□□□ 0.19
PRKDC-206ENST00000536429 UBE2Q2LH0YL09 131 aa16.23■□□□□ 0.19
PRKDC-206ENST00000536429 ZBTB22O15209 634 aa16.23■□□□□ 0.19
PRKDC-206ENST00000536429 MYO1BO43795 1136 aa16.23■□□□□ 0.19
PRKDC-206ENST00000536429 HDLBPQ00341 1268 aaKnown RBP16.23■□□□□ 0.19
PRKDC-206ENST00000536429 PRKG1Q13976 671 aa16.23■□□□□ 0.19
PRKDC-206ENST00000536429 ZDHHC15Q96MV8 337 aa16.23■□□□□ 0.19
PRKDC-206ENST00000536429 GPR108Q9NPR9 543 aa16.23■□□□□ 0.19
PRKDC-206ENST00000536429 HMG20BQ9P0W2 317 aa16.23■□□□□ 0.19
PRKDC-206ENST00000536429 FAM155AB1AL88 458 aaPredicted RBP16.22■□□□□ 0.19
PRKDC-206ENST00000536429 TCP10L2B9ZVM9 353 aa16.22■□□□□ 0.19
PRKDC-206ENST00000536429 LDHBP07195 334 aaKnown RBP16.22■□□□□ 0.19
PRKDC-206ENST00000536429 ECE1P42892 770 aa16.22■□□□□ 0.19
PRKDC-206ENST00000536429 RRP1P56182 461 aaKnown RBP16.22■□□□□ 0.19
PRKDC-206ENST00000536429 RASA3Q14644 834 aa16.22■□□□□ 0.19
PRKDC-206ENST00000536429 GORABQ5T7V8 394 aa16.22■□□□□ 0.19
PRKDC-206ENST00000536429 RGMBQ6NW40 437 aa16.22■□□□□ 0.19
PRKDC-206ENST00000536429 RPAP2Q8IXW5 612 aaPredicted RBP16.22■□□□□ 0.19
PRKDC-206ENST00000536429 EAF2Q96CJ1 260 aaPredicted RBP16.22■□□□□ 0.19
PRKDC-206ENST00000536429 MRIQ9BWK5 157 aa16.22■□□□□ 0.19
PRKDC-206ENST00000536429 CCDC8Q9H0W5 538 aaPredicted RBP16.22■□□□□ 0.19
PRKDC-206ENST00000536429 ARID4AP29374 1257 aaPredicted RBP16.21■□□□□ 0.19
PRKDC-206ENST00000536429 MCAMP43121 646 aa16.21■□□□□ 0.19
PRKDC-206ENST00000536429 NBPF12Q5TAG4 269 aaPredicted RBP16.21■□□□□ 0.19
PRKDC-206ENST00000536429 HHIPL2Q6UWX4 724 aa16.21■□□□□ 0.19
PRKDC-206ENST00000536429 TBC1D9Q6ZT07 1266 aa16.21■□□□□ 0.19
PRKDC-206ENST00000536429 WBP1LQ9NX94 342 aa16.21■□□□□ 0.19
PRKDC-206ENST00000536429 ABCF2Q9UG63 623 aa16.21■□□□□ 0.19
PRKDC-206ENST00000536429 DBNLQ9UJU6 430 aaKnown RBP16.21■□□□□ 0.19
PRKDC-206ENST00000536429 DAGLAQ9Y4D2 1042 aa16.21■□□□□ 0.19
PRKDC-206ENST00000536429 MAST3O60307 1309 aa16.2■□□□□ 0.18
PRKDC-206ENST00000536429 PDS5AQ29RF7 1337 aaKnown RBP16.2■□□□□ 0.18
PRKDC-206ENST00000536429 APBB1O00213 710 aa16.2■□□□□ 0.18
PRKDC-206ENST00000536429 FOXN1O15353 648 aa16.2■□□□□ 0.18
PRKDC-206ENST00000536429 ZNF157P51786 506 aaPredicted RBP16.2■□□□□ 0.18
PRKDC-206ENST00000536429 FKBP1BP68106 108 aa16.2■□□□□ 0.18
PRKDC-206ENST00000536429 TTLL12Q14166 644 aaPredicted RBP16.2■□□□□ 0.18
PRKDC-206ENST00000536429 SPATA5Q8NB90 893 aa16.2■□□□□ 0.18
PRKDC-206ENST00000536429 ZNF384Q8TF68 577 aa16.2■□□□□ 0.18
PRKDC-206ENST00000536429 TMEM39BQ9GZU3 492 aa16.2■□□□□ 0.18
PRKDC-206ENST00000536429 IL1RAPL2Q9NP60 686 aa16.2■□□□□ 0.18
PRKDC-206ENST00000536429 SNRKQ9NRH2 765 aa16.2■□□□□ 0.18
PRKDC-206ENST00000536429 PPP2R3BQ9Y5P8 575 aa16.2■□□□□ 0.18
PRKDC-206ENST00000536429 PAPPA2Q9BXP8 1791 aa16.19■□□□□ 0.18
PRKDC-206ENST00000536429 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
PRKDC-206ENST00000536429 TEPSINQ96N21 525 aa16.19■□□□□ 0.18
PRKDC-206ENST00000536429 SLC10A3P09131 477 aa16.18■□□□□ 0.18
PRKDC-206ENST00000536429 NF2P35240 595 aa16.18■□□□□ 0.18
PRKDC-206ENST00000536429 TTC39AQ5SRH9 613 aa16.18■□□□□ 0.18
PRKDC-206ENST00000536429 CDC42EP5Q6NZY7 148 aa16.18■□□□□ 0.18
PRKDC-206ENST00000536429 RHPN1Q8TCX5 695 aa16.18■□□□□ 0.18
PRKDC-206ENST00000536429 ANGEL1Q9UNK9 670 aaKnown RBP16.18■□□□□ 0.18
PRKDC-206ENST00000536429 THSD7BQ9C0I4 1608 aa16.18■□□□□ 0.18
PRKDC-206ENST00000536429 HMMRO75330 724 aa16.17■□□□□ 0.18
PRKDC-206ENST00000536429 UQCRFS1P1P0C7P4 283 aa16.17■□□□□ 0.18
PRKDC-206ENST00000536429 MAP2K2P36507 400 aa16.17■□□□□ 0.18
PRKDC-206ENST00000536429 MECOMQ03112 1051 aa16.17■□□□□ 0.18
PRKDC-206ENST00000536429 NFIAQ12857 509 aa16.17■□□□□ 0.18
PRKDC-206ENST00000536429 AACSQ86V21 672 aa16.17■□□□□ 0.18
PRKDC-206ENST00000536429 DZIP1Q86YF9 867 aaKnown RBP16.17■□□□□ 0.18
PRKDC-206ENST00000536429 ERC1Q8IUD2 1116 aa16.17■□□□□ 0.18
PRKDC-206ENST00000536429 ZGPATQ8N5A5 531 aaKnown RBP16.17■□□□□ 0.18
PRKDC-206ENST00000536429 CHMP4BQ9H444 224 aaKnown RBP16.17■□□□□ 0.18
PRKDC-206ENST00000536429 GAKO14976 1311 aa16.17■□□□□ 0.18
PRKDC-206ENST00000536429 MYH13Q9UKX3 1938 aa16.16■□□□□ 0.18
PRKDC-206ENST00000536429 ZAP70P43403 619 aa16.16■□□□□ 0.18
PRKDC-206ENST00000536429 KIF23Q02241 960 aaPredicted RBP16.16■□□□□ 0.18
PRKDC-206ENST00000536429 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
PRKDC-206ENST00000536429 NOGQ13253 232 aa16.16■□□□□ 0.18
PRKDC-206ENST00000536429 TNFAIP1Q13829 316 aa16.16■□□□□ 0.18
PRKDC-206ENST00000536429 CCDC158Q5M9N0 1113 aa16.16■□□□□ 0.18
PRKDC-206ENST00000536429 LDLRAD1Q5T700 205 aa16.16■□□□□ 0.18
PRKDC-206ENST00000536429 ERICH6Q7L0X2 663 aa16.16■□□□□ 0.18
PRKDC-206ENST00000536429 ARMC9Q7Z3E5 817 aa16.16■□□□□ 0.18
PRKDC-206ENST00000536429 CCDC102AQ96A19 550 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms