RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
RPAIN-205ENST00000536255 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
RPAIN-205ENST00000536255 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
RPAIN-205ENST00000536255 ZBTB22O15209 634 aa16.62■□□□□ 0.25
RPAIN-205ENST00000536255 MYO1BO43795 1136 aa16.62■□□□□ 0.25
RPAIN-205ENST00000536255 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
RPAIN-205ENST00000536255 GBA2Q9HCG7 927 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-205ENST00000536255 SUGT1Q9Y2Z0 365 aa16.62■□□□□ 0.25
RPAIN-205ENST00000536255 POLR2AP24928 1970 aaKnown RBP16.62■□□□□ 0.25
RPAIN-205ENST00000536255 CRKP46108 304 aa16.61■□□□□ 0.25
RPAIN-205ENST00000536255 IRX6P78412 446 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-205ENST00000536255 HDLBPQ00341 1268 aaKnown RBP16.61■□□□□ 0.25
RPAIN-205ENST00000536255 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
RPAIN-205ENST00000536255 HHIPL1Q96JK4 782 aa16.61■□□□□ 0.25
RPAIN-205ENST00000536255 PRMT6Q96LA8 375 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-205ENST00000536255 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
RPAIN-205ENST00000536255 DENND2AQ9ULE3 1009 aa16.61■□□□□ 0.25
RPAIN-205ENST00000536255 MAST3O60307 1309 aa16.61■□□□□ 0.25
RPAIN-205ENST00000536255 CLRN2A0PK11 232 aa16.6■□□□□ 0.25
RPAIN-205ENST00000536255 APBB1O00213 710 aa16.6■□□□□ 0.25
RPAIN-205ENST00000536255 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
RPAIN-205ENST00000536255 RASGRF1Q13972 1273 aa16.6■□□□□ 0.25
RPAIN-205ENST00000536255 CCDC158Q5M9N0 1113 aa16.6■□□□□ 0.25
RPAIN-205ENST00000536255 PAXIP1Q6ZW49 1069 aaPredicted RBP16.6■□□□□ 0.25
RPAIN-205ENST00000536255 C2orf69Q8N8R5 385 aa16.6■□□□□ 0.25
RPAIN-205ENST00000536255 LRRCC1Q9C099 1032 aa16.6■□□□□ 0.25
RPAIN-205ENST00000536255 RWDD1Q9H446 243 aaPredicted RBP16.6■□□□□ 0.25
RPAIN-205ENST00000536255 PCNTO95613 3336 aa16.6■□□□□ 0.25
RPAIN-205ENST00000536255 AOX1Q06278 1338 aa16.6■□□□□ 0.25
RPAIN-205ENST00000536255 MYH13Q9UKX3 1938 aa16.6■□□□□ 0.25
RPAIN-205ENST00000536255 ECE1P42892 770 aa16.59■□□□□ 0.25
RPAIN-205ENST00000536255 HUNKP57058 714 aa16.59■□□□□ 0.25
RPAIN-205ENST00000536255 PRAMEF18Q5VWM3 479 aa16.59■□□□□ 0.25
RPAIN-205ENST00000536255 CYP4F22Q6NT55 531 aa16.59■□□□□ 0.25
RPAIN-205ENST00000536255 AACSQ86V21 672 aa16.59■□□□□ 0.25
RPAIN-205ENST00000536255 TEKT1Q969V4 418 aa16.59■□□□□ 0.25
RPAIN-205ENST00000536255 CAPNS2Q96L46 248 aa16.59■□□□□ 0.25
RPAIN-205ENST00000536255 PDS5AQ29RF7 1337 aaKnown RBP16.59■□□□□ 0.25
RPAIN-205ENST00000536255 WDR33Q9C0J8 1336 aaKnown RBP16.59■□□□□ 0.25
RPAIN-205ENST00000536255 SALL1Q9NSC2 1324 aa16.59■□□□□ 0.25
RPAIN-205ENST00000536255 IFIT2P09913 472 aaKnown RBP16.58■□□□□ 0.24
RPAIN-205ENST00000536255 UQCRFS1P1P0C7P4 283 aa16.58■□□□□ 0.24
RPAIN-205ENST00000536255 FKBP1BP68106 108 aa16.58■□□□□ 0.24
RPAIN-205ENST00000536255 SPDYE2Q495Y8 402 aa16.58■□□□□ 0.24
RPAIN-205ENST00000536255 EAF2Q96CJ1 260 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-205ENST00000536255 GCC1Q96CN9 775 aa16.58■□□□□ 0.24
RPAIN-205ENST00000536255 MRIQ9BWK5 157 aa16.58■□□□□ 0.24
RPAIN-205ENST00000536255 DEFB129Q9H1M3 183 aa16.58■□□□□ 0.24
RPAIN-205ENST00000536255 VEZTQ9HBM0 779 aa16.58■□□□□ 0.24
RPAIN-205ENST00000536255 IL1RAPL2Q9NP60 686 aa16.58■□□□□ 0.24
RPAIN-205ENST00000536255 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-205ENST00000536255 ECM29Q5VYK3 1845 aa16.58■□□□□ 0.24
RPAIN-205ENST00000536255 PRDX5P30044 214 aa16.57■□□□□ 0.24
RPAIN-205ENST00000536255 GRM1Q13255 1194 aa16.57■□□□□ 0.24
RPAIN-205ENST00000536255 TTC39AQ5SRH9 613 aa16.57■□□□□ 0.24
RPAIN-205ENST00000536255 ZDHHC15Q96MV8 337 aa16.57■□□□□ 0.24
RPAIN-205ENST00000536255 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
RPAIN-205ENST00000536255 ZNF70Q9UC06 446 aaPredicted RBP16.57■□□□□ 0.24
RPAIN-205ENST00000536255 PPP2R3BQ9Y5P8 575 aa16.57■□□□□ 0.24
RPAIN-205ENST00000536255 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
RPAIN-205ENST00000536255 THSD7BQ9C0I4 1608 aa16.56■□□□□ 0.24
RPAIN-205ENST00000536255 LDHBP07195 334 aaKnown RBP16.56■□□□□ 0.24
RPAIN-205ENST00000536255 NEFLP07196 543 aa16.56■□□□□ 0.24
RPAIN-205ENST00000536255 ARID4AP29374 1257 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-205ENST00000536255 NF2P35240 595 aa16.56■□□□□ 0.24
RPAIN-205ENST00000536255 TNFAIP1Q13829 316 aa16.56■□□□□ 0.24
RPAIN-205ENST00000536255 HHIPL2Q6UWX4 724 aa16.56■□□□□ 0.24
RPAIN-205ENST00000536255 ZGPATQ8N5A5 531 aaKnown RBP16.56■□□□□ 0.24
RPAIN-205ENST00000536255 DBNDD2Q9BQY9 259 aa16.56■□□□□ 0.24
RPAIN-205ENST00000536255 CCDC8Q9H0W5 538 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-205ENST00000536255 SPATA5Q8NB90 893 aa16.55■□□□□ 0.24
RPAIN-205ENST00000536255 ZNF512BQ96KM6 892 aaPredicted RBP16.55■□□□□ 0.24
RPAIN-205ENST00000536255 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
RPAIN-205ENST00000536255 DBNLQ9UJU6 430 aaKnown RBP16.55■□□□□ 0.24
RPAIN-205ENST00000536255 HSPA1AP0DMV8 641 aaKnown RBP16.54■□□□□ 0.24
RPAIN-205ENST00000536255 HSPA1BP0DMV9 641 aaKnown RBP16.54■□□□□ 0.24
RPAIN-205ENST00000536255 RASA3Q14644 834 aa16.54■□□□□ 0.24
RPAIN-205ENST00000536255 DIXDC1Q155Q3 683 aa16.54■□□□□ 0.24
RPAIN-205ENST00000536255 APOBEC3HQ6NTF7 200 aaKnown RBP16.54■□□□□ 0.24
RPAIN-205ENST00000536255 RGMBQ6NW40 437 aa16.54■□□□□ 0.24
RPAIN-205ENST00000536255 PI16Q6UXB8 463 aa16.54■□□□□ 0.24
RPAIN-205ENST00000536255 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
RPAIN-205ENST00000536255 MCAMP43121 646 aa16.53■□□□□ 0.24
RPAIN-205ENST00000536255 TTLL12Q14166 644 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-205ENST00000536255 SPTY2D1Q68D10 685 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-205ENST00000536255 MOB2Q70IA6 237 aa16.53■□□□□ 0.24
RPAIN-205ENST00000536255 TLR7Q9NYK1 1049 aaKnown RBP16.53■□□□□ 0.24
RPAIN-205ENST00000536255 ABCF2Q9UG63 623 aa16.53■□□□□ 0.24
RPAIN-205ENST00000536255 DAGLAQ9Y4D2 1042 aa16.53■□□□□ 0.24
RPAIN-205ENST00000536255 SSC5DA1L4H1 1573 aa16.52■□□□□ 0.24
RPAIN-205ENST00000536255 TCP10L2B9ZVM9 353 aa16.52■□□□□ 0.24
RPAIN-205ENST00000536255 AOC2O75106 756 aa16.52■□□□□ 0.24
RPAIN-205ENST00000536255 MAP2K2P36507 400 aa16.52■□□□□ 0.24
RPAIN-205ENST00000536255 ZNF157P51786 506 aaPredicted RBP16.52■□□□□ 0.24
RPAIN-205ENST00000536255 MAP2K1Q02750 393 aaPredicted RBP16.52■□□□□ 0.24
RPAIN-205ENST00000536255 NOGQ13253 232 aa16.52■□□□□ 0.24
RPAIN-205ENST00000536255 DZIP1Q86YF9 867 aaKnown RBP16.52■□□□□ 0.24
RPAIN-205ENST00000536255 CCDC102AQ96A19 550 aa16.52■□□□□ 0.24
RPAIN-205ENST00000536255 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
RPAIN-205ENST00000536255 TMOD2Q9NZR1 351 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms