RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 C2orf69Q8N8R5 385 aa20.34■□□□□ 0.85
ATL3-202ENST00000535789 ATP8B2P98198 1209 aa20.33■□□□□ 0.85
ATL3-202ENST00000535789 CCDC102BQ68D86 513 aa20.33■□□□□ 0.85
ATL3-202ENST00000535789 TBC1D22AQ8WUA7 517 aa20.33■□□□□ 0.85
ATL3-202ENST00000535789 RCAN3Q9UKA8 241 aa20.33■□□□□ 0.85
ATL3-202ENST00000535789 FOCADQ5VW36 1801 aa20.32■□□□□ 0.84
ATL3-202ENST00000535789 FRAT2O75474 233 aaPredicted RBP20.32■□□□□ 0.84
ATL3-202ENST00000535789 SLC10A3P09131 477 aa20.32■□□□□ 0.84
ATL3-202ENST00000535789 RBM5P52756 815 aaKnown RBP eCLIP20.32■□□□□ 0.84
ATL3-202ENST00000535789 CEP85Q6P2H3 762 aa20.32■□□□□ 0.84
ATL3-202ENST00000535789 RASAL3Q86YV0 1011 aa20.32■□□□□ 0.84
ATL3-202ENST00000535789 DEFB129Q9H1M3 183 aa20.32■□□□□ 0.84
ATL3-202ENST00000535789 TDRD3Q9H7E2 651 aaKnown RBP20.32■□□□□ 0.84
ATL3-202ENST00000535789 ZNF70Q9UC06 446 aaPredicted RBP20.32■□□□□ 0.84
ATL3-202ENST00000535789 ZBTB22O15209 634 aa20.31■□□□□ 0.84
ATL3-202ENST00000535789 PRDX5P30044 214 aa20.31■□□□□ 0.84
ATL3-202ENST00000535789 RASGRF1Q13972 1273 aa20.31■□□□□ 0.84
ATL3-202ENST00000535789 XAGE2Q96GT9 111 aa20.31■□□□□ 0.84
ATL3-202ENST00000535789 VEZTQ9HBM0 779 aa20.31■□□□□ 0.84
ATL3-202ENST00000535789 UBE2Q2LH0YL09 131 aa20.3■□□□□ 0.84
ATL3-202ENST00000535789 HSPA8P11142 646 aaKnown RBP20.3■□□□□ 0.84
ATL3-202ENST00000535789 MAP2K2P36507 400 aa20.3■□□□□ 0.84
ATL3-202ENST00000535789 FKBP1BP68106 108 aa20.3■□□□□ 0.84
ATL3-202ENST00000535789 C20orf194Q5TEA3 1177 aa20.3■□□□□ 0.84
ATL3-202ENST00000535789 SALL1Q9NSC2 1324 aa20.29■□□□□ 0.84
ATL3-202ENST00000535789 ZNF157P51786 506 aaPredicted RBP20.29■□□□□ 0.84
ATL3-202ENST00000535789 HDLBPQ00341 1268 aaKnown RBP20.29■□□□□ 0.84
ATL3-202ENST00000535789 MVPQ14764 893 aaKnown RBP20.29■□□□□ 0.84
ATL3-202ENST00000535789 DIXDC1Q155Q3 683 aa20.29■□□□□ 0.84
ATL3-202ENST00000535789 APOBEC3HQ6NTF7 200 aaKnown RBP20.29■□□□□ 0.84
ATL3-202ENST00000535789 TEPSINQ96N21 525 aa20.29■□□□□ 0.84
ATL3-202ENST00000535789 COG6Q9Y2V7 657 aa20.29■□□□□ 0.84
ATL3-202ENST00000535789 MYO1BO43795 1136 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 CACNB3P54284 484 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 MAP2K1Q02750 393 aaPredicted RBP20.28■□□□□ 0.84
ATL3-202ENST00000535789 NOGQ13253 232 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 PRKG1Q13976 671 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 RASA3Q14644 834 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 NBPF12Q5TAG4 269 aaPredicted RBP20.28■□□□□ 0.84
ATL3-202ENST00000535789 PI16Q6UXB8 463 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 WDR66Q8TBY9 1149 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 TEKT1Q969V4 418 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 ZDHHC15Q96MV8 337 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 SUGT1Q9Y2Z0 365 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 PPP2R3BQ9Y5P8 575 aa20.28■□□□□ 0.84
ATL3-202ENST00000535789 PDS5AQ29RF7 1337 aaKnown RBP20.27■□□□□ 0.84
ATL3-202ENST00000535789 SEMA3EO15041 775 aa20.27■□□□□ 0.84
ATL3-202ENST00000535789 TSKSQ9UJT2 592 aa20.27■□□□□ 0.84
ATL3-202ENST00000535789 DENND2AQ9ULE3 1009 aa20.27■□□□□ 0.84
ATL3-202ENST00000535789 AKAP2Q9Y2D5 859 aa20.27■□□□□ 0.84
ATL3-202ENST00000535789 NOP58Q9Y2X3 529 aaKnown RBP20.27■□□□□ 0.84
ATL3-202ENST00000535789 DAGLAQ9Y4D2 1042 aa20.27■□□□□ 0.84
ATL3-202ENST00000535789 SIPA1L1O43166 1804 aa20.27■□□□□ 0.84
ATL3-202ENST00000535789 MAST3O60307 1309 aa20.27■□□□□ 0.83
ATL3-202ENST00000535789 CENPBP07199 599 aaPredicted RBP20.26■□□□□ 0.83
ATL3-202ENST00000535789 LBX1P52954 281 aa20.26■□□□□ 0.83
ATL3-202ENST00000535789 G3BP1Q13283 466 aaKnown RBP eCLIP20.26■□□□□ 0.83
ATL3-202ENST00000535789 HHIPL2Q6UWX4 724 aa20.26■□□□□ 0.83
ATL3-202ENST00000535789 ZNF384Q8TF68 577 aa20.26■□□□□ 0.83
ATL3-202ENST00000535789 RFX7Q2KHR2 1363 aa20.25■□□□□ 0.83
ATL3-202ENST00000535789 TCP10L2B9ZVM9 353 aa20.25■□□□□ 0.83
ATL3-202ENST00000535789 ARID4AP29374 1257 aaPredicted RBP20.25■□□□□ 0.83
ATL3-202ENST00000535789 CTCFP49711 727 aaPredicted RBP20.25■□□□□ 0.83
ATL3-202ENST00000535789 KIF23Q02241 960 aaPredicted RBP20.25■□□□□ 0.83
ATL3-202ENST00000535789 MAP3K11Q16584 847 aa20.25■□□□□ 0.83
ATL3-202ENST00000535789 LDLRAD1Q5T700 205 aa20.25■□□□□ 0.83
ATL3-202ENST00000535789 AIDAQ96BJ3 306 aa20.25■□□□□ 0.83
ATL3-202ENST00000535789 NEUROD6Q96NK8 337 aa20.25■□□□□ 0.83
ATL3-202ENST00000535789 MRIQ9BWK5 157 aa20.25■□□□□ 0.83
ATL3-202ENST00000535789 TMEM39BQ9GZU3 492 aa20.25■□□□□ 0.83
ATL3-202ENST00000535789 GNL3LQ9NVN8 582 aaKnown RBP20.25■□□□□ 0.83
ATL3-202ENST00000535789 SURF6O75683 361 aaKnown RBP20.24■□□□□ 0.83
ATL3-202ENST00000535789 MCAMP43121 646 aa20.24■□□□□ 0.83
ATL3-202ENST00000535789 TTLL12Q14166 644 aaPredicted RBP20.24■□□□□ 0.83
ATL3-202ENST00000535789 TNNI3KQ59H18 835 aa20.24■□□□□ 0.83
ATL3-202ENST00000535789 SIRT2Q8IXJ6 389 aa20.24■□□□□ 0.83
ATL3-202ENST00000535789 CCDC102AQ96A19 550 aa20.24■□□□□ 0.83
ATL3-202ENST00000535789 DBNDD2Q9BQY9 259 aa20.24■□□□□ 0.83
ATL3-202ENST00000535789 ZBTB40Q9NUA8 1239 aa20.24■□□□□ 0.83
ATL3-202ENST00000535789 TLR7Q9NYK1 1049 aaKnown RBP20.24■□□□□ 0.83
ATL3-202ENST00000535789 HMG20BQ9P0W2 317 aa20.24■□□□□ 0.83
ATL3-202ENST00000535789 ANGEL1Q9UNK9 670 aaKnown RBP20.24■□□□□ 0.83
ATL3-202ENST00000535789 FPGT-TNNI3KV9GXZ4 949 aa20.24■□□□□ 0.83
ATL3-202ENST00000535789 ATAD5Q96QE3 1844 aa20.23■□□□□ 0.83
ATL3-202ENST00000535789 NF2P35240 595 aa20.23■□□□□ 0.83
ATL3-202ENST00000535789 CLMNQ96JQ2 1002 aa20.23■□□□□ 0.83
ATL3-202ENST00000535789 GPR108Q9NPR9 543 aa20.23■□□□□ 0.83
ATL3-202ENST00000535789 EXOC6BQ9Y2D4 811 aa20.23■□□□□ 0.83
ATL3-202ENST00000535789 MYH7P12883 1935 aa20.23■□□□□ 0.83
ATL3-202ENST00000535789 RPAP1Q9BWH6 1393 aaPredicted RBP20.22■□□□□ 0.83
ATL3-202ENST00000535789 LDHBP07195 334 aaKnown RBP20.22■□□□□ 0.83
ATL3-202ENST00000535789 CSRNP1Q96S65 589 aa20.22■□□□□ 0.83
ATL3-202ENST00000535789 PRDM10Q9NQV6 1147 aa20.22■□□□□ 0.83
ATL3-202ENST00000535789 DBNLQ9UJU6 430 aaKnown RBP20.22■□□□□ 0.83
ATL3-202ENST00000535789 DDX19BQ9UMR2 479 aa20.22■□□□□ 0.83
ATL3-202ENST00000535789 PHIPQ8WWQ0 1821 aa20.22■□□□□ 0.83
ATL3-202ENST00000535789 GAKO14976 1311 aa20.22■□□□□ 0.83
ATL3-202ENST00000535789 PTPRFP10586 1907 aa20.21■□□□□ 0.83
ATL3-202ENST00000535789 USP2O75604 605 aaPredicted RBP20.21■□□□□ 0.83
ATL3-202ENST00000535789 MS4A1P11836 297 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms