RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TTC39AQ5SRH9 613 aa27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 PI16Q6UXB8 463 aa27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 DLK2Q6UY11 383 aa27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 SPATA5Q8NB90 893 aa27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 EXOC6Q8TAG9 804 aa27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 ZNF512BQ96KM6 892 aaPredicted RBP27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 MRIQ9BWK5 157 aa27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 AOX1Q06278 1338 aa27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 SULF1Q8IWU6 871 aa27.89■■■□□ 2.06
SFSWAP-204ENST00000535399 CLASRPQ8N2M8 674 aaKnown RBP27.89■■■□□ 2.06
SFSWAP-204ENST00000535399 MAST3O60307 1309 aa27.89■■■□□ 2.05
SFSWAP-204ENST00000535399 RBM5P52756 815 aaKnown RBP eCLIP27.88■■■□□ 2.05
SFSWAP-204ENST00000535399 ZGPATQ8N5A5 531 aaKnown RBP27.88■■■□□ 2.05
SFSWAP-204ENST00000535399 CREBZFQ9NS37 354 aa27.88■■■□□ 2.05
SFSWAP-204ENST00000535399 LDHBP07195 334 aaKnown RBP27.87■■■□□ 2.05
SFSWAP-204ENST00000535399 CST9Q5W186 159 aa27.87■■■□□ 2.05
SFSWAP-204ENST00000535399 TEKT1Q969V4 418 aa27.87■■■□□ 2.05
SFSWAP-204ENST00000535399 SCAF8Q9UPN6 1271 aaKnown RBP27.87■■■□□ 2.05
SFSWAP-204ENST00000535399 TMEM88BA6NKF7 163 aa27.86■■■□□ 2.05
SFSWAP-204ENST00000535399 ZDHHC15Q96MV8 337 aa27.86■■■□□ 2.05
SFSWAP-204ENST00000535399 LRRCC1Q9C099 1032 aa27.86■■■□□ 2.05
SFSWAP-204ENST00000535399 ABCF2Q9UG63 623 aa27.85■■■□□ 2.05
SFSWAP-204ENST00000535399 CLRN2A0PK11 232 aa27.84■■■□□ 2.05
SFSWAP-204ENST00000535399 SMARCA5O60264 1052 aaPredicted RBP27.84■■■□□ 2.05
SFSWAP-204ENST00000535399 CELF2O95319 508 aaKnown RBP27.84■■■□□ 2.05
SFSWAP-204ENST00000535399 HHIPL2Q6UWX4 724 aa27.84■■■□□ 2.05
SFSWAP-204ENST00000535399 APOBEC3FQ8IUX4 373 aaKnown RBP27.84■■■□□ 2.05
SFSWAP-204ENST00000535399 SNRKQ9NRH2 765 aa27.84■■■□□ 2.05
SFSWAP-204ENST00000535399 MYH13Q9UKX3 1938 aa27.83■■■□□ 2.05
SFSWAP-204ENST00000535399 MYO1BO43795 1136 aa27.83■■■□□ 2.05
SFSWAP-204ENST00000535399 IFIT2P09913 472 aaKnown RBP27.83■■■□□ 2.05
SFSWAP-204ENST00000535399 HDAC1Q13547 482 aaPredicted RBP27.83■■■□□ 2.05
SFSWAP-204ENST00000535399 DIXDC1Q155Q3 683 aa27.83■■■□□ 2.05
SFSWAP-204ENST00000535399 SPDYE2Q495Y8 402 aa27.83■■■□□ 2.05
SFSWAP-204ENST00000535399 SPTY2D1Q68D10 685 aaPredicted RBP27.83■■■□□ 2.05
SFSWAP-204ENST00000535399 APOBEC3HQ6NTF7 200 aaKnown RBP27.83■■■□□ 2.05
SFSWAP-204ENST00000535399 TBC1D9Q6ZT07 1266 aa27.83■■■□□ 2.05
SFSWAP-204ENST00000535399 CDCA5Q96FF9 252 aa27.83■■■□□ 2.05
SFSWAP-204ENST00000535399 CEP350Q5VT06 3117 aa27.83■■■□□ 2.04
SFSWAP-204ENST00000535399 BCL11AQ9H165 835 aa27.82■■■□□ 2.04
SFSWAP-204ENST00000535399 TDRD3Q9H7E2 651 aaKnown RBP27.82■■■□□ 2.04
SFSWAP-204ENST00000535399 ZNF70Q9UC06 446 aaPredicted RBP27.82■■■□□ 2.04
SFSWAP-204ENST00000535399 ZAP70P43403 619 aa27.81■■■□□ 2.04
SFSWAP-204ENST00000535399 ERICH6Q7L0X2 663 aa27.81■■■□□ 2.04
SFSWAP-204ENST00000535399 DNAJC5GQ8N7S2 189 aa27.81■■■□□ 2.04
SFSWAP-204ENST00000535399 ZNF408Q9H9D4 720 aa27.81■■■□□ 2.04
SFSWAP-204ENST00000535399 DAGLAQ9Y4D2 1042 aa27.81■■■□□ 2.04
SFSWAP-204ENST00000535399 POLR2AP24928 1970 aaKnown RBP27.8■■■□□ 2.04
SFSWAP-204ENST00000535399 CYP2E1P05181 493 aaPredicted RBP27.8■■■□□ 2.04
SFSWAP-204ENST00000535399 IRX6P78412 446 aaPredicted RBP27.8■■■□□ 2.04
SFSWAP-204ENST00000535399 PRAMEF18Q5VWM3 479 aa27.79■■■□□ 2.04
SFSWAP-204ENST00000535399 DZIP1Q86YF9 867 aaKnown RBP27.79■■■□□ 2.04
SFSWAP-204ENST00000535399 ZNF384Q8TF68 577 aa27.79■■■□□ 2.04
SFSWAP-204ENST00000535399 VEZTQ9HBM0 779 aa27.79■■■□□ 2.04
SFSWAP-204ENST00000535399 GAKO14976 1311 aa27.78■■■□□ 2.04
SFSWAP-204ENST00000535399 MECOMQ03112 1051 aa27.78■■■□□ 2.04
SFSWAP-204ENST00000535399 DEFB129Q9H1M3 183 aa27.78■■■□□ 2.04
SFSWAP-204ENST00000535399 FAM163AQ96GL9 167 aaPredicted RBP27.77■■■□□ 2.04
SFSWAP-204ENST00000535399 PIH1D3Q9NQM4 214 aaKnown RBP27.77■■■□□ 2.04
SFSWAP-204ENST00000535399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.76■■■□□ 2.03
SFSWAP-204ENST00000535399 NSUN4Q96CB9 384 aaKnown RBP27.76■■■□□ 2.03
SFSWAP-204ENST00000535399 LRP2BPQ9P2M1 347 aa27.76■■■□□ 2.03
SFSWAP-204ENST00000535399 ABT1Q9ULW3 272 aaKnown RBP27.76■■■□□ 2.03
SFSWAP-204ENST00000535399 TLL2Q9Y6L7 1015 aa27.76■■■□□ 2.03
SFSWAP-204ENST00000535399 NDUFB9Q9Y6M9 179 aa27.76■■■□□ 2.03
SFSWAP-204ENST00000535399 AKAP11Q9UKA4 1901 aa27.75■■■□□ 2.03
SFSWAP-204ENST00000535399 SLF2Q8IX21 1173 aa27.75■■■□□ 2.03
SFSWAP-204ENST00000535399 RAI14Q9P0K7 980 aa27.75■■■□□ 2.03
SFSWAP-204ENST00000535399 PPP2R3BQ9Y5P8 575 aa27.75■■■□□ 2.03
SFSWAP-204ENST00000535399 TRPM7Q96QT4 1865 aa27.74■■■□□ 2.03
SFSWAP-204ENST00000535399 RASA3Q14644 834 aa27.74■■■□□ 2.03
SFSWAP-204ENST00000535399 CDC42EP5Q6NZY7 148 aa27.74■■■□□ 2.03
SFSWAP-204ENST00000535399 GCC1Q96CN9 775 aa27.74■■■□□ 2.03
SFSWAP-204ENST00000535399 GBA2Q9HCG7 927 aaPredicted RBP27.74■■■□□ 2.03
SFSWAP-204ENST00000535399 CNTNAP1P78357 1384 aa27.73■■■□□ 2.03
SFSWAP-204ENST00000535399 MROH7-TTC4A0A0A0MT08 1334 aa27.73■■■□□ 2.03
SFSWAP-204ENST00000535399 RASSF10A6NK89 507 aa27.73■■■□□ 2.03
SFSWAP-204ENST00000535399 TCP10L2B9ZVM9 353 aa27.73■■■□□ 2.03
SFSWAP-204ENST00000535399 ATP5JP18859 108 aa27.73■■■□□ 2.03
SFSWAP-204ENST00000535399 CACNB3P54284 484 aa27.73■■■□□ 2.03
SFSWAP-204ENST00000535399 SAPCD2Q86UD0 394 aa27.73■■■□□ 2.03
SFSWAP-204ENST00000535399 KLRG1Q96E93 195 aa27.73■■■□□ 2.03
SFSWAP-204ENST00000535399 ANTXR1Q9H6X2 564 aa27.73■■■□□ 2.03
SFSWAP-204ENST00000535399 MKRN1Q9UHC7 482 aaKnown RBP27.73■■■□□ 2.03
SFSWAP-204ENST00000535399 GSTO1P78417 241 aa27.72■■■□□ 2.03
SFSWAP-204ENST00000535399 TNFAIP1Q13829 316 aa27.72■■■□□ 2.03
SFSWAP-204ENST00000535399 RWDD1Q9H446 243 aaPredicted RBP27.72■■■□□ 2.03
SFSWAP-204ENST00000535399 IGSF3O75054 1194 aa27.71■■■□□ 2.03
SFSWAP-204ENST00000535399 IGHDP01880 384 aa27.71■■■□□ 2.03
SFSWAP-204ENST00000535399 FKBP1CQ5VVH2 108 aa27.71■■■□□ 2.03
SFSWAP-204ENST00000535399 C2orf69Q8N8R5 385 aa27.71■■■□□ 2.03
SFSWAP-204ENST00000535399 USP40Q9NVE5 1235 aa27.71■■■□□ 2.03
SFSWAP-204ENST00000535399 TMOD2Q9NZR1 351 aa27.71■■■□□ 2.03
SFSWAP-204ENST00000535399 ECM29Q5VYK3 1845 aa27.71■■■□□ 2.03
SFSWAP-204ENST00000535399 GPR75-ASB3A0A0A6YYF3 556 aa27.7■■■□□ 2.02
SFSWAP-204ENST00000535399 LDHCP07864 332 aa27.7■■■□□ 2.02
SFSWAP-204ENST00000535399 BOLA2Q9H3K6 86 aa27.7■■■□□ 2.02
SFSWAP-204ENST00000535399 BTDP43251 543 aa27.69■■■□□ 2.02
SFSWAP-204ENST00000535399 DEFB115Q30KQ5 88 aa27.69■■■□□ 2.02
SFSWAP-204ENST00000535399 ANKRD45Q5TZF3 282 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms