RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 TNFAIP1Q13829 316 aa14.6□□□□□ -0.07
CTNND1-238ENST00000534647 NBPF12Q5TAG4 269 aaPredicted RBP14.6□□□□□ -0.07
CTNND1-238ENST00000534647 ANKRD13AQ8IZ07 590 aa14.6□□□□□ -0.07
CTNND1-238ENST00000534647 ZNF594Q96JF6 807 aaPredicted RBP14.6□□□□□ -0.07
CTNND1-238ENST00000534647 CLMNQ96JQ2 1002 aa14.6□□□□□ -0.07
CTNND1-238ENST00000534647 C9orf78Q9NZ63 289 aaPredicted RBP14.6□□□□□ -0.07
CTNND1-238ENST00000534647 FZD1Q9UP38 647 aa14.6□□□□□ -0.07
CTNND1-238ENST00000534647 CHMP3Q9Y3E7 222 aa14.6□□□□□ -0.07
CTNND1-238ENST00000534647 CLRN2A0PK11 232 aa14.59□□□□□ -0.07
CTNND1-238ENST00000534647 F8W031 263 aaPredicted RBP14.59□□□□□ -0.07
CTNND1-238ENST00000534647 IGF2BP3O00425 579 aaKnown RBP eCLIP14.59□□□□□ -0.07
CTNND1-238ENST00000534647 RASA3Q14644 834 aa14.59□□□□□ -0.07
CTNND1-238ENST00000534647 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
CTNND1-238ENST00000534647 TAF7LQ5H9L4 462 aa14.59□□□□□ -0.07
CTNND1-238ENST00000534647 OTUD7BQ6GQQ9 843 aa14.59□□□□□ -0.07
CTNND1-238ENST00000534647 FAM84BQ96KN1 310 aaPredicted RBP14.59□□□□□ -0.07
CTNND1-238ENST00000534647 SRCIN1Q9C0H9 1055 aa14.59□□□□□ -0.07
CTNND1-238ENST00000534647 CNNM1Q9NRU3 951 aa14.59□□□□□ -0.07
CTNND1-238ENST00000534647 UTYO14607 1347 aa14.59□□□□□ -0.07
CTNND1-238ENST00000534647 HIBADHP31937 336 aaKnown RBP14.58□□□□□ -0.08
CTNND1-238ENST00000534647 MFSD14BQ5SR56 506 aa14.58□□□□□ -0.08
CTNND1-238ENST00000534647 INTS3Q68E01 1043 aaKnown RBP14.58□□□□□ -0.08
CTNND1-238ENST00000534647 KAZALD1Q96I82 304 aa14.58□□□□□ -0.08
CTNND1-238ENST00000534647 ZNF70Q9UC06 446 aaPredicted RBP14.58□□□□□ -0.08
CTNND1-238ENST00000534647 RIPOR2Q9Y4F9 1068 aa14.58□□□□□ -0.08
CTNND1-238ENST00000534647 AOX1Q06278 1338 aa14.58□□□□□ -0.08
CTNND1-238ENST00000534647 PLIN1O60240 522 aa14.57□□□□□ -0.08
CTNND1-238ENST00000534647 RBM5P52756 815 aaKnown RBP eCLIP14.57□□□□□ -0.08
CTNND1-238ENST00000534647 HDLBPQ00341 1268 aaKnown RBP14.57□□□□□ -0.08
CTNND1-238ENST00000534647 OTOP1Q7RTM1 612 aa14.57□□□□□ -0.08
CTNND1-238ENST00000534647 TEPSINQ96N21 525 aa14.57□□□□□ -0.08
CTNND1-238ENST00000534647 MRIQ9BWK5 157 aa14.57□□□□□ -0.08
CTNND1-238ENST00000534647 VEZTQ9HBM0 779 aa14.57□□□□□ -0.08
CTNND1-238ENST00000534647 MROH5Q6ZUA9 1318 aa14.57□□□□□ -0.08
CTNND1-238ENST00000534647 LAMB1P07942 1786 aa14.57□□□□□ -0.08
CTNND1-238ENST00000534647 GJA5P36382 358 aa14.56□□□□□ -0.08
CTNND1-238ENST00000534647 GYG1P46976 350 aa14.56□□□□□ -0.08
CTNND1-238ENST00000534647 RABL6Q3YEC7 729 aaPredicted RBP14.56□□□□□ -0.08
CTNND1-238ENST00000534647 FBXO33Q7Z6M2 555 aa14.56□□□□□ -0.08
CTNND1-238ENST00000534647 DZIP1LQ8IYY4 767 aaKnown RBP14.56□□□□□ -0.08
CTNND1-238ENST00000534647 ERO1AQ96HE7 468 aa14.56□□□□□ -0.08
CTNND1-238ENST00000534647 MS4A4AQ96JQ5 239 aa14.56□□□□□ -0.08
CTNND1-238ENST00000534647 PTPN18Q99952 460 aa14.56□□□□□ -0.08
CTNND1-238ENST00000534647 SLC24A3Q9HC58 644 aa14.56□□□□□ -0.08
CTNND1-238ENST00000534647 WDR70Q9NW82 654 aa14.56□□□□□ -0.08
CTNND1-238ENST00000534647 TTF2Q9UNY4 1162 aaKnown RBP14.56□□□□□ -0.08
CTNND1-238ENST00000534647 SALL2Q9Y467 1007 aaPredicted RBP14.56□□□□□ -0.08
CTNND1-238ENST00000534647 ECM29Q5VYK3 1845 aa14.56□□□□□ -0.08
CTNND1-238ENST00000534647 A0A1B0GUL6 1792 aa14.55□□□□□ -0.08
CTNND1-238ENST00000534647 CRHR2Q13324 411 aa14.55□□□□□ -0.08
CTNND1-238ENST00000534647 SUCLG2Q96I99 432 aa14.55□□□□□ -0.08
CTNND1-238ENST00000534647 PUS3Q9BZE2 481 aaKnown RBP14.55□□□□□ -0.08
CTNND1-238ENST00000534647 TDRD3Q9H7E2 651 aaKnown RBP14.55□□□□□ -0.08
CTNND1-238ENST00000534647 JAG2Q9Y219 1238 aa14.55□□□□□ -0.08
CTNND1-238ENST00000534647 PTPN22Q9Y2R2 807 aa14.55□□□□□ -0.08
CTNND1-238ENST00000534647 TRIM17Q9Y577 477 aa14.55□□□□□ -0.08
CTNND1-238ENST00000534647 NBPF7P0C2Y1 421 aaPredicted RBP14.54□□□□□ -0.08
CTNND1-238ENST00000534647 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
CTNND1-238ENST00000534647 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.54□□□□□ -0.08
CTNND1-238ENST00000534647 TBC1D22AQ8WUA7 517 aa14.54□□□□□ -0.08
CTNND1-238ENST00000534647 ZNF521Q96K83 1311 aa14.53□□□□□ -0.08
CTNND1-238ENST00000534647 CRKP46108 304 aa14.53□□□□□ -0.08
CTNND1-238ENST00000534647 TNNI2P48788 182 aa14.53□□□□□ -0.08
CTNND1-238ENST00000534647 MAP3K9P80192 1104 aa14.53□□□□□ -0.08
CTNND1-238ENST00000534647 SP3Q02447 781 aa14.53□□□□□ -0.08
CTNND1-238ENST00000534647 ARMC5Q96C12 935 aa14.53□□□□□ -0.08
CTNND1-238ENST00000534647 OPTNQ96CV9 577 aa14.53□□□□□ -0.08
CTNND1-238ENST00000534647 ZMYND15Q9H091 742 aa14.53□□□□□ -0.08
CTNND1-238ENST00000534647 KIF16BQ96L93 1317 aa14.52□□□□□ -0.08
CTNND1-238ENST00000534647 PDE8BO95263 885 aa14.52□□□□□ -0.09
CTNND1-238ENST00000534647 GTF2A2P52657 109 aa14.52□□□□□ -0.09
CTNND1-238ENST00000534647 CAVIN4Q5BKX8 364 aa14.52□□□□□ -0.09
CTNND1-238ENST00000534647 FKBP1CQ5VVH2 108 aa14.52□□□□□ -0.09
CTNND1-238ENST00000534647 VGLL2Q8N8G2 317 aa14.52□□□□□ -0.09
CTNND1-238ENST00000534647 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.52□□□□□ -0.09
CTNND1-238ENST00000534647 ELP3Q9H9T3 547 aa14.52□□□□□ -0.09
CTNND1-238ENST00000534647 EFCC1Q9HA90 598 aa14.52□□□□□ -0.09
CTNND1-238ENST00000534647 SUGT1Q9Y2Z0 365 aa14.52□□□□□ -0.09
CTNND1-238ENST00000534647 ARHGEF6Q15052 776 aa14.51□□□□□ -0.09
CTNND1-238ENST00000534647 FAM83AQ86UY5 434 aa14.51□□□□□ -0.09
CTNND1-238ENST00000534647 VPS37DQ86XT2 251 aa14.51□□□□□ -0.09
CTNND1-238ENST00000534647 ANKRD44Q8N8A2 993 aa14.51□□□□□ -0.09
CTNND1-238ENST00000534647 TMEM39BQ9GZU3 492 aa14.51□□□□□ -0.09
CTNND1-238ENST00000534647 BICC1Q9H694 974 aaKnown RBP14.51□□□□□ -0.09
CTNND1-238ENST00000534647 PTPRCP08575 1304 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 TCP10L2B9ZVM9 353 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 VGLL4Q14135 290 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 GRIK5Q16478 980 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 LRRC24Q50LG9 513 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 CDAN1Q8IWY9 1227 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 MRPL50Q8N5N7 158 aaKnown RBP14.5□□□□□ -0.09
CTNND1-238ENST00000534647 CD99L2Q8TCZ2 262 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 BRI3BPQ8WY22 251 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 TEKT1Q969V4 418 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 GCC1Q96CN9 775 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 HOOK2Q96ED9 719 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 ZDHHC15Q96MV8 337 aa14.5□□□□□ -0.09
CTNND1-238ENST00000534647 ZCCHC17Q9NP64 241 aaKnown RBP14.5□□□□□ -0.09
CTNND1-238ENST00000534647 SPDYE5A6NIY4 337 aa14.49□□□□□ -0.09
CTNND1-238ENST00000534647 FGFR2P21802 821 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms