RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 INHBEP58166 350 aa23.1■■□□□ 1.29
CTSB-233ENST00000534636 PKN2Q16513 984 aaKnown RBP23.1■■□□□ 1.29
CTSB-233ENST00000534636 TDRD3Q9H7E2 651 aaKnown RBP23.1■■□□□ 1.29
CTSB-233ENST00000534636 OTOFQ9HC10 1997 aa23.09■■□□□ 1.29
CTSB-233ENST00000534636 UBTFL1P0CB47 393 aaPredicted RBP23.09■■□□□ 1.29
CTSB-233ENST00000534636 NOM1Q5C9Z4 860 aaKnown RBP23.09■■□□□ 1.29
CTSB-233ENST00000534636 WNK4Q96J92 1243 aa23.09■■□□□ 1.29
CTSB-233ENST00000534636 MAST3O60307 1309 aa23.08■■□□□ 1.29
CTSB-233ENST00000534636 GPR25O00155 361 aa23.08■■□□□ 1.29
CTSB-233ENST00000534636 SLC5A1P13866 664 aa23.08■■□□□ 1.29
CTSB-233ENST00000534636 ANKRD13AQ8IZ07 590 aa23.08■■□□□ 1.29
CTSB-233ENST00000534636 TEKT1Q969V4 418 aa23.08■■□□□ 1.29
CTSB-233ENST00000534636 CLMNQ96JQ2 1002 aa23.08■■□□□ 1.29
CTSB-233ENST00000534636 HDAC5Q9UQL6 1122 aa23.08■■□□□ 1.29
CTSB-233ENST00000534636 TCP10L2B9ZVM9 353 aa23.07■■□□□ 1.28
CTSB-233ENST00000534636 EYA2O00167 538 aa23.07■■□□□ 1.28
CTSB-233ENST00000534636 BCAMP50895 628 aa23.07■■□□□ 1.28
CTSB-233ENST00000534636 HDLBPQ00341 1268 aaKnown RBP23.07■■□□□ 1.28
CTSB-233ENST00000534636 CFHR5Q9BXR6 569 aa23.07■■□□□ 1.28
CTSB-233ENST00000534636 API5Q9BZZ5 524 aaKnown RBP23.07■■□□□ 1.28
CTSB-233ENST00000534636 TMOD2Q9NZR1 351 aa23.07■■□□□ 1.28
CTSB-233ENST00000534636 SUGT1Q9Y2Z0 365 aa23.06■■□□□ 1.28
CTSB-233ENST00000534636 CCER2I3L3R5 266 aa23.05■■□□□ 1.28
CTSB-233ENST00000534636 FKTNO75072 461 aa23.05■■□□□ 1.28
CTSB-233ENST00000534636 USP2O75604 605 aaPredicted RBP23.05■■□□□ 1.28
CTSB-233ENST00000534636 OTUD7BQ6GQQ9 843 aa23.05■■□□□ 1.28
CTSB-233ENST00000534636 IFNL1Q8IU54 200 aa23.05■■□□□ 1.28
CTSB-233ENST00000534636 TRMT2AQ8IZ69 625 aaKnown RBP23.05■■□□□ 1.28
CTSB-233ENST00000534636 LPIN2Q92539 896 aa23.05■■□□□ 1.28
CTSB-233ENST00000534636 NOB1Q9ULX3 412 aaKnown RBP23.05■■□□□ 1.28
CTSB-233ENST00000534636 FGFR2P21802 821 aa23.04■■□□□ 1.28
CTSB-233ENST00000534636 FBXO3Q9UK99 471 aa23.04■■□□□ 1.28
CTSB-233ENST00000534636 RFX5P48382 616 aaPredicted RBP23.03■■□□□ 1.28
CTSB-233ENST00000534636 GRIK5Q16478 980 aa23.03■■□□□ 1.28
CTSB-233ENST00000534636 TMEM39BQ9GZU3 492 aa23.03■■□□□ 1.28
CTSB-233ENST00000534636 SIL1Q9H173 461 aa23.03■■□□□ 1.28
CTSB-233ENST00000534636 HPS5Q9UPZ3 1129 aa23.03■■□□□ 1.28
CTSB-233ENST00000534636 PDE4DIPQ5VU43 2346 aa23.03■■□□□ 1.28
CTSB-233ENST00000534636 SOX10P56693 466 aa23.02■■□□□ 1.28
CTSB-233ENST00000534636 WDR66Q8TBY9 1149 aa23.02■■□□□ 1.28
CTSB-233ENST00000534636 ZDHHC15Q96MV8 337 aa23.02■■□□□ 1.28
CTSB-233ENST00000534636 ELP3Q9H9T3 547 aa23.02■■□□□ 1.28
CTSB-233ENST00000534636 CIAO1O76071 339 aa23.01■■□□□ 1.27
CTSB-233ENST00000534636 OPTNQ96CV9 577 aa23.01■■□□□ 1.27
CTSB-233ENST00000534636 HOOK2Q96ED9 719 aa23.01■■□□□ 1.27
CTSB-233ENST00000534636 TEPSINQ96N21 525 aa23.01■■□□□ 1.27
CTSB-233ENST00000534636 MRIQ9BWK5 157 aa23.01■■□□□ 1.27
CTSB-233ENST00000534636 GNL3LQ9NVN8 582 aaKnown RBP23.01■■□□□ 1.27
CTSB-233ENST00000534636 CSADQ9Y600 493 aa23.01■■□□□ 1.27
CTSB-233ENST00000534636 ATP2B3Q16720 1220 aa23■■□□□ 1.27
CTSB-233ENST00000534636 CEP126Q9P2H0 1117 aa23■■□□□ 1.27
CTSB-233ENST00000534636 TNRC18O15417 2968 aaPredicted RBP23■■□□□ 1.27
CTSB-233ENST00000534636 IGF2BP3O00425 579 aaKnown RBP eCLIP22.99■■□□□ 1.27
CTSB-233ENST00000534636 CACNB3P54284 484 aa22.99■■□□□ 1.27
CTSB-233ENST00000534636 FBXO46Q6PJ61 603 aaPredicted RBP22.99■■□□□ 1.27
CTSB-233ENST00000534636 ATG9AQ7Z3C6 839 aa22.99■■□□□ 1.27
CTSB-233ENST00000534636 CDAN1Q8IWY9 1227 aa22.99■■□□□ 1.27
CTSB-233ENST00000534636 R3HDMLQ9H3Y0 253 aa22.99■■□□□ 1.27
CTSB-233ENST00000534636 LRRFIP2Q9Y608 721 aaKnown RBP22.99■■□□□ 1.27
CTSB-233ENST00000534636 AK9Q5TCS8 1911 aa22.98■■□□□ 1.27
CTSB-233ENST00000534636 GJA5P36382 358 aa22.98■■□□□ 1.27
CTSB-233ENST00000534636 IL15P40933 162 aaPredicted RBP22.98■■□□□ 1.27
CTSB-233ENST00000534636 HHIPL2Q6UWX4 724 aa22.98■■□□□ 1.27
CTSB-233ENST00000534636 FAM83AQ86UY5 434 aa22.98■■□□□ 1.27
CTSB-233ENST00000534636 RARSP54136 660 aaKnown RBP22.97■■□□□ 1.27
CTSB-233ENST00000534636 MAP3K9P80192 1104 aa22.97■■□□□ 1.27
CTSB-233ENST00000534636 VGLL4Q14135 290 aa22.97■■□□□ 1.27
CTSB-233ENST00000534636 FKBP1CQ5VVH2 108 aa22.97■■□□□ 1.27
CTSB-233ENST00000534636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.97■■□□□ 1.27
CTSB-233ENST00000534636 RPAP1Q9BWH6 1393 aaPredicted RBP22.97■■□□□ 1.27
CTSB-233ENST00000534636 APOBEC3HQ6NTF7 200 aaKnown RBP22.96■■□□□ 1.27
CTSB-233ENST00000534636 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.96■■□□□ 1.27
CTSB-233ENST00000534636 ARHGAP45Q92619 1136 aa22.96■■□□□ 1.27
CTSB-233ENST00000534636 GNAI3P08754 354 aa22.95■■□□□ 1.26
CTSB-233ENST00000534636 GTF2A2P52657 109 aa22.95■■□□□ 1.26
CTSB-233ENST00000534636 CRHR2Q13324 411 aa22.95■■□□□ 1.26
CTSB-233ENST00000534636 DCAF15Q66K64 600 aa22.95■■□□□ 1.26
CTSB-233ENST00000534636 ERO1AQ96HE7 468 aa22.95■■□□□ 1.26
CTSB-233ENST00000534636 MEIS3Q99687 375 aa22.95■■□□□ 1.26
CTSB-233ENST00000534636 TRIM17Q9Y577 477 aa22.95■■□□□ 1.26
CTSB-233ENST00000534636 TESPA1A2RU30 521 aaPredicted RBP22.94■■□□□ 1.26
CTSB-233ENST00000534636 SEMA3EO15041 775 aa22.94■■□□□ 1.26
CTSB-233ENST00000534636 LDHBP07195 334 aaKnown RBP22.94■■□□□ 1.26
CTSB-233ENST00000534636 OTUD5Q96G74 571 aa22.94■■□□□ 1.26
CTSB-233ENST00000534636 WRNIP1Q96S55 665 aa22.94■■□□□ 1.26
CTSB-233ENST00000534636 DENND2AQ9ULE3 1009 aa22.94■■□□□ 1.26
CTSB-233ENST00000534636 HTTP42858 3142 aa22.93■■□□□ 1.26
CTSB-233ENST00000534636 IPO8O15397 1037 aaKnown RBP22.93■■□□□ 1.26
CTSB-233ENST00000534636 WDHD1O75717 1129 aaPredicted RBP22.93■■□□□ 1.26
CTSB-233ENST00000534636 ZGPATQ8N5A5 531 aaKnown RBP22.93■■□□□ 1.26
CTSB-233ENST00000534636 COPRSQ9NQ92 184 aa22.93■■□□□ 1.26
CTSB-233ENST00000534636 PA2G4Q9UQ80 394 aaKnown RBP22.93■■□□□ 1.26
CTSB-233ENST00000534636 CCL15-CCL14A0A0B4J2E2 113 aa22.92■■□□□ 1.26
CTSB-233ENST00000534636 CCL15Q16663 113 aa22.92■■□□□ 1.26
CTSB-233ENST00000534636 INTS3Q68E01 1043 aaKnown RBP22.92■■□□□ 1.26
CTSB-233ENST00000534636 CNKSR2Q8WXI2 1034 aa22.92■■□□□ 1.26
CTSB-233ENST00000534636 CENPFP49454 3210 aa22.91■■□□□ 1.26
CTSB-233ENST00000534636 MYH2Q9UKX2 1941 aa22.91■■□□□ 1.26
CTSB-233ENST00000534636 SPDYE5A6NIY4 337 aa22.91■■□□□ 1.26
CTSB-233ENST00000534636 PRDX5P30044 214 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 367.3 ms