RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 RBM5P52756 815 aaKnown RBP eCLIP29.52■■■□□ 2.32
SIPA1-210ENST00000534406 HDLBPQ00341 1268 aaKnown RBP29.52■■■□□ 2.32
SIPA1-210ENST00000534406 FSTL1Q12841 308 aa29.52■■■□□ 2.32
SIPA1-210ENST00000534406 MTMR14Q8NCE2 650 aa29.52■■■□□ 2.32
SIPA1-210ENST00000534406 ZAP70P43403 619 aa29.51■■■□□ 2.31
SIPA1-210ENST00000534406 CRKP46108 304 aa29.51■■■□□ 2.31
SIPA1-210ENST00000534406 ERICH6Q7L0X2 663 aa29.51■■■□□ 2.31
SIPA1-210ENST00000534406 DZIP1Q86YF9 867 aaKnown RBP29.51■■■□□ 2.31
SIPA1-210ENST00000534406 TEKT1Q969V4 418 aa29.51■■■□□ 2.31
SIPA1-210ENST00000534406 ZBED3Q96IU2 234 aaPredicted RBP29.51■■■□□ 2.31
SIPA1-210ENST00000534406 SPDYE2BA6NHP3 402 aa29.5■■■□□ 2.31
SIPA1-210ENST00000534406 WNT10BO00744 389 aa29.5■■■□□ 2.31
SIPA1-210ENST00000534406 SPDYE6P0CI01 402 aa29.5■■■□□ 2.31
SIPA1-210ENST00000534406 ATP5JP18859 108 aa29.5■■■□□ 2.31
SIPA1-210ENST00000534406 TBC1D9Q6ZT07 1266 aa29.5■■■□□ 2.31
SIPA1-210ENST00000534406 ECHDC1Q9NTX5 307 aa29.5■■■□□ 2.31
SIPA1-210ENST00000534406 GGA3Q9NZ52 723 aa29.5■■■□□ 2.31
SIPA1-210ENST00000534406 PGAP2Q9UHJ9 254 aa29.5■■■□□ 2.31
SIPA1-210ENST00000534406 NBPF9Q3BBW0 867 aa29.49■■■□□ 2.31
SIPA1-210ENST00000534406 MAP1SQ66K74 1059 aaPredicted RBP29.49■■■□□ 2.31
SIPA1-210ENST00000534406 B4GALNT3Q6L9W6 998 aa29.49■■■□□ 2.31
SIPA1-210ENST00000534406 DOCK2Q92608 1830 aa29.49■■■□□ 2.31
SIPA1-210ENST00000534406 MYH2Q9UKX2 1941 aa29.49■■■□□ 2.31
SIPA1-210ENST00000534406 ASTN2O75129 1339 aaPredicted RBP29.48■■■□□ 2.31
SIPA1-210ENST00000534406 CYP2E1P05181 493 aaPredicted RBP29.48■■■□□ 2.31
SIPA1-210ENST00000534406 LNPKQ9C0E8 428 aa29.48■■■□□ 2.31
SIPA1-210ENST00000534406 LRP2BPQ9P2M1 347 aa29.48■■■□□ 2.31
SIPA1-210ENST00000534406 PCDHAC2Q9Y5I4 1007 aa29.48■■■□□ 2.31
SIPA1-210ENST00000534406 MYO5AQ9Y4I1 1855 aaKnown RBP29.48■■■□□ 2.31
SIPA1-210ENST00000534406 NUCB1Q02818 461 aa29.47■■■□□ 2.31
SIPA1-210ENST00000534406 HHIPL2Q6UWX4 724 aa29.47■■■□□ 2.31
SIPA1-210ENST00000534406 DNAJC2Q99543 621 aaKnown RBP29.47■■■□□ 2.31
SIPA1-210ENST00000534406 MRIQ9BWK5 157 aa29.47■■■□□ 2.31
SIPA1-210ENST00000534406 RAI14Q9P0K7 980 aa29.47■■■□□ 2.31
SIPA1-210ENST00000534406 NDUFB9Q9Y6M9 179 aa29.47■■■□□ 2.31
SIPA1-210ENST00000534406 PITPNM2Q9BZ72 1349 aa29.46■■■□□ 2.31
SIPA1-210ENST00000534406 MYO1BO43795 1136 aa29.46■■■□□ 2.31
SIPA1-210ENST00000534406 DIXDC1Q155Q3 683 aa29.46■■■□□ 2.31
SIPA1-210ENST00000534406 ANGEL2Q5VTE6 544 aaKnown RBP29.46■■■□□ 2.31
SIPA1-210ENST00000534406 CNTROBQ8N137 903 aa29.46■■■□□ 2.31
SIPA1-210ENST00000534406 OTUD7AQ8TE49 926 aaPredicted RBP29.46■■■□□ 2.31
SIPA1-210ENST00000534406 DCPSQ96C86 337 aaKnown RBP29.46■■■□□ 2.31
SIPA1-210ENST00000534406 ZDHHC15Q96MV8 337 aa29.46■■■□□ 2.31
SIPA1-210ENST00000534406 BOLA2Q9H3K6 86 aa29.46■■■□□ 2.31
SIPA1-210ENST00000534406 PIH1D3Q9NQM4 214 aaKnown RBP29.46■■■□□ 2.31
SIPA1-210ENST00000534406 POLR2AP24928 1970 aaKnown RBP29.46■■■□□ 2.31
SIPA1-210ENST00000534406 TTC41PQ6P2S7 1318 aa29.45■■■□□ 2.31
SIPA1-210ENST00000534406 MX1P20591 662 aa29.45■■■□□ 2.31
SIPA1-210ENST00000534406 TSHZ3Q63HK5 1081 aa29.45■■■□□ 2.31
SIPA1-210ENST00000534406 CHD1LQ86WJ1 897 aa29.45■■■□□ 2.31
SIPA1-210ENST00000534406 SLF2Q8IX21 1173 aa29.45■■■□□ 2.31
SIPA1-210ENST00000534406 HAUS7Q99871 368 aa29.45■■■□□ 2.31
SIPA1-210ENST00000534406 SALL3Q9BXA9 1300 aa29.45■■■□□ 2.3
SIPA1-210ENST00000534406 C1QTNF8P60827 252 aa29.44■■■□□ 2.3
SIPA1-210ENST00000534406 MECOMQ03112 1051 aa29.44■■■□□ 2.3
SIPA1-210ENST00000534406 TTF1Q15361 905 aaPredicted RBP29.44■■■□□ 2.3
SIPA1-210ENST00000534406 PRMT6Q96LA8 375 aaPredicted RBP29.44■■■□□ 2.3
SIPA1-210ENST00000534406 DAGLAQ9Y4D2 1042 aa29.44■■■□□ 2.3
SIPA1-210ENST00000534406 IGSF3O75054 1194 aa29.43■■■□□ 2.3
SIPA1-210ENST00000534406 GSTO1P78417 241 aa29.43■■■□□ 2.3
SIPA1-210ENST00000534406 GAKO14976 1311 aa29.43■■■□□ 2.3
SIPA1-210ENST00000534406 GOLIM4O00461 696 aa29.42■■■□□ 2.3
SIPA1-210ENST00000534406 ERC2O15083 957 aa29.42■■■□□ 2.3
SIPA1-210ENST00000534406 CDC37L1Q7L3B6 337 aa29.42■■■□□ 2.3
SIPA1-210ENST00000534406 KRT26Q7Z3Y9 468 aa29.42■■■□□ 2.3
SIPA1-210ENST00000534406 APOBEC3FQ8IUX4 373 aaKnown RBP29.42■■■□□ 2.3
SIPA1-210ENST00000534406 SULF1Q8IWU6 871 aa29.42■■■□□ 2.3
SIPA1-210ENST00000534406 NSUN4Q96CB9 384 aaKnown RBP29.42■■■□□ 2.3
SIPA1-210ENST00000534406 GLIS2Q9BZE0 524 aaPredicted RBP29.42■■■□□ 2.3
SIPA1-210ENST00000534406 ANTXR1Q9H6X2 564 aa29.42■■■□□ 2.3
SIPA1-210ENST00000534406 PAG1Q9NWQ8 432 aa29.42■■■□□ 2.3
SIPA1-210ENST00000534406 AOX1Q06278 1338 aa29.42■■■□□ 2.3
SIPA1-210ENST00000534406 IDH1O75874 414 aaKnown RBP29.41■■■□□ 2.3
SIPA1-210ENST00000534406 MROH7-TTC4A0A0A0MT08 1334 aa29.41■■■□□ 2.3
SIPA1-210ENST00000534406 CLRN2A0PK11 232 aa29.4■■■□□ 2.3
SIPA1-210ENST00000534406 SPDYE2Q495Y8 402 aa29.4■■■□□ 2.3
SIPA1-210ENST00000534406 APOBEC3HQ6NTF7 200 aaKnown RBP29.4■■■□□ 2.3
SIPA1-210ENST00000534406 GLRX3O76003 335 aaKnown RBP29.39■■■□□ 2.3
SIPA1-210ENST00000534406 ITGBL1O95965 494 aaPredicted RBP29.39■■■□□ 2.3
SIPA1-210ENST00000534406 MAP3K12Q12852 859 aa29.39■■■□□ 2.3
SIPA1-210ENST00000534406 NAA16Q6N069 864 aaPredicted RBP29.39■■■□□ 2.3
SIPA1-210ENST00000534406 ZNF384Q8TF68 577 aa29.39■■■□□ 2.3
SIPA1-210ENST00000534406 EDC3Q96F86 508 aaKnown RBP29.39■■■□□ 2.3
SIPA1-210ENST00000534406 TDRD3Q9H7E2 651 aaKnown RBP29.39■■■□□ 2.3
SIPA1-210ENST00000534406 VEZTQ9HBM0 779 aa29.39■■■□□ 2.3
SIPA1-210ENST00000534406 TRPM7Q96QT4 1865 aa29.38■■■□□ 2.29
SIPA1-210ENST00000534406 MYH7P12883 1935 aa29.38■■■□□ 2.29
SIPA1-210ENST00000534406 ADM5C9JUS6 153 aa29.38■■■□□ 2.29
SIPA1-210ENST00000534406 LDHCP07864 332 aa29.38■■■□□ 2.29
SIPA1-210ENST00000534406 USP48Q86UV5 1035 aa29.38■■■□□ 2.29
SIPA1-210ENST00000534406 PI4K2BQ8TCG2 481 aa29.38■■■□□ 2.29
SIPA1-210ENST00000534406 FAM163AQ96GL9 167 aaPredicted RBP29.38■■■□□ 2.29
SIPA1-210ENST00000534406 TMOD2Q9NZR1 351 aa29.38■■■□□ 2.29
SIPA1-210ENST00000534406 ZNF70Q9UC06 446 aaPredicted RBP29.38■■■□□ 2.29
SIPA1-210ENST00000534406 STAP2Q9UGK3 403 aa29.38■■■□□ 2.29
SIPA1-210ENST00000534406 PASKQ96RG2 1323 aa29.38■■■□□ 2.29
SIPA1-210ENST00000534406 PDE1AP54750 535 aa29.37■■■□□ 2.29
SIPA1-210ENST00000534406 TRAF5O00463 557 aa29.36■■■□□ 2.29
SIPA1-210ENST00000534406 ERICH6BQ5W0A0 696 aa29.36■■■□□ 2.29
SIPA1-210ENST00000534406 TMED8Q6PL24 325 aaPredicted RBP29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms