RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 SPAG5Q96R06 1193 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 RHOXF2BP0C7M4 288 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 ZNF445P59923 1031 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 XAGE3Q8WTP9 111 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 DRC1Q96MC2 740 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 RHOXF2Q9BQY4 288 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 PUF60Q9UHX1 559 aaKnown RBP13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 PLXNC1O60486 1568 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 ZBTB16Q05516 673 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 SUPT20HQ8NEM7 779 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 BRF1Q92994 677 aa13.71□□□□□ -0.21
AMBRA1-212ENST00000534300 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.22
AMBRA1-212ENST00000534300 ADGRL3Q9HAR2 1447 aa13.71□□□□□ -0.22
AMBRA1-212ENST00000534300 NDUFAB1O14561 156 aa13.71□□□□□ -0.22
AMBRA1-212ENST00000534300 MXRA7P84157 204 aa13.71□□□□□ -0.22
AMBRA1-212ENST00000534300 ZNF569Q5MCW4 686 aa13.71□□□□□ -0.22
AMBRA1-212ENST00000534300 ZGPATQ8N5A5 531 aaKnown RBP13.71□□□□□ -0.22
AMBRA1-212ENST00000534300 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 HSPA1LP34931 641 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 RRAGBQ5VZM2 374 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 CATIPQ7Z7H3 387 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 IFNKQ9P0W0 207 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 MKRN1Q9UHC7 482 aaKnown RBP13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 ATP5J2-PTCD1G3V325 749 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 METAP2P50579 478 aaKnown RBP eCLIP13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 MAP3K9P80192 1104 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 NLGN1Q8N2Q7 840 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 IFT74Q96LB3 600 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 IQCGQ9H095 443 aaKnown RBP13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 TRIM37O94972 964 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 BAG3O95817 575 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 SETDB1Q15047 1291 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 LMBR1Q8WVP7 490 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 PTPRTO14522 1441 aa13.7□□□□□ -0.22
AMBRA1-212ENST00000534300 ZFYP08048 801 aaPredicted RBP13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 ACTN2P35609 894 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 PDE1AP54750 535 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 NCOA7Q8NI08 942 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 CCDC42Q96M95 316 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 RBM28Q9NW13 759 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 PSMA7O14818 248 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 ARHGAP25P42331 645 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 GSTO1P78417 241 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 UBE3BQ7Z3V4 1068 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 WDR17Q8IZU2 1322 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 CLGNO14967 610 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 PDE6BP35913 854 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 TNIP1Q15025 636 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 LZTFL1Q9NQ48 299 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 CLNS1AP54105 237 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 EIF6P56537 245 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 KARSQ15046 597 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 ZNF804AQ7Z570 1209 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 LMNTD2Q8IXW0 634 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 KRI1Q8N9T8 703 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 ANKRD2Q9GZV1 360 aa13.69□□□□□ -0.22
AMBRA1-212ENST00000534300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.69□□□□□ -0.227e-7■■□□□ 12.6
AMBRA1-212ENST00000534300 FERP16591 822 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 MYOM2P54296 1465 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 PI4KAP2A4QPH2 592 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 PI4KAP1Q8N8J0 262 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 DNAI2Q9GZS0 605 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 MKNK2Q9HBH9 465 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 LUC7L2Q9Y383 392 aaKnown RBP13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 RTL1A6NKG5 1358 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 TMEM67Q5HYA8 995 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 STXBP4Q6ZWJ1 553 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 PAIP2Q9BPZ3 127 aaKnown RBP13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 SPTLC2O15270 562 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 RANBP6O60518 1105 aaKnown RBP13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 CNGA4Q8IV77 575 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 SELENOSQ9BQE4 189 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 GUCA1BQ9UMX6 200 aa13.68□□□□□ -0.22
AMBRA1-212ENST00000534300 SBNO2Q9Y2G9 1366 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 ALDH1L1O75891 902 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 MAP2K2P36507 400 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 SREK1Q8WXA9 508 aaKnown RBP13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 EXOC1Q9NV70 894 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 PRDM15P57071 1507 aaPredicted RBP13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 TNNC1P63316 161 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 HSP90AA4PQ58FG1 418 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 ANKRD44Q8N8A2 993 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 BEGAINQ9BUH8 593 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 TET3O43151 1660 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 FAM83GA6ND36 823 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 PRC1O43663 620 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 HLA-DOAP06340 250 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 ZNF790Q6PG37 636 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 BAG1Q99933 345 aaPredicted RBP13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 SLC52A2Q9HAB3 445 aa13.67□□□□□ -0.22
AMBRA1-212ENST00000534300 ATP2A1O14983 1001 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 UQCRFS1P1P0C7P4 283 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 ATL3Q6DD88 541 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 KSR2Q6VAB6 950 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 FEZ2Q9UHY8 353 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms