RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 TMEM39BQ9GZU3 492 aa18.95■□□□□ 0.62
CTSB-230ENST00000534149 GRM8O00222 908 aa18.94■□□□□ 0.62
CTSB-230ENST00000534149 VGLL4Q14135 290 aa18.94■□□□□ 0.62
CTSB-230ENST00000534149 TAF1CQ15572 869 aaPredicted RBP18.94■□□□□ 0.62
CTSB-230ENST00000534149 DZIP1LQ8IYY4 767 aaKnown RBP18.94■□□□□ 0.62
CTSB-230ENST00000534149 SALL2Q9Y467 1007 aaPredicted RBP18.94■□□□□ 0.62
CTSB-230ENST00000534149 CCL15-CCL14A0A0B4J2E2 113 aa18.93■□□□□ 0.62
CTSB-230ENST00000534149 HIBADHP31937 336 aaKnown RBP18.93■□□□□ 0.62
CTSB-230ENST00000534149 CRKP46108 304 aa18.93■□□□□ 0.62
CTSB-230ENST00000534149 UBE4AQ14139 1066 aa18.93■□□□□ 0.62
CTSB-230ENST00000534149 CCL15Q16663 113 aa18.93■□□□□ 0.62
CTSB-230ENST00000534149 ZNF333Q96JL9 665 aa18.93■□□□□ 0.62
CTSB-230ENST00000534149 FAM84BQ96KN1 310 aaPredicted RBP18.93■□□□□ 0.62
CTSB-230ENST00000534149 PTCH2Q9Y6C5 1203 aa18.93■□□□□ 0.62
CTSB-230ENST00000534149 GTF2A2P52657 109 aa18.92■□□□□ 0.62
CTSB-230ENST00000534149 FAM43AQ8N2R8 423 aa18.92■□□□□ 0.62
CTSB-230ENST00000534149 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.92■□□□□ 0.62
CTSB-230ENST00000534149 OTUD5Q96G74 571 aa18.92■□□□□ 0.62
CTSB-230ENST00000534149 TMEM106CQ9BVX2 250 aa18.92■□□□□ 0.62
CTSB-230ENST00000534149 PUS3Q9BZE2 481 aaKnown RBP18.92■□□□□ 0.62
CTSB-230ENST00000534149 ZFYVE28Q9HCC9 887 aa18.92■□□□□ 0.62
CTSB-230ENST00000534149 C9orf78Q9NZ63 289 aaPredicted RBP18.92■□□□□ 0.62
CTSB-230ENST00000534149 ZSWIM8A7E2V4 1837 aa18.92■□□□□ 0.62
CTSB-230ENST00000534149 TNNI2P48788 182 aa18.91■□□□□ 0.62
CTSB-230ENST00000534149 MAP3K9P80192 1104 aa18.91■□□□□ 0.62
CTSB-230ENST00000534149 GRIK5Q16478 980 aa18.91■□□□□ 0.62
CTSB-230ENST00000534149 SLC9C1Q4G0N8 1177 aa18.91■□□□□ 0.62
CTSB-230ENST00000534149 IQSEC3Q9UPP2 1182 aaPredicted RBP18.91■□□□□ 0.62
CTSB-230ENST00000534149 CSADQ9Y600 493 aa18.91■□□□□ 0.62
CTSB-230ENST00000534149 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
CTSB-230ENST00000534149 CEP290O15078 2479 aa18.89■□□□□ 0.61
CTSB-230ENST00000534149 MYCP01106 439 aaPredicted RBP18.89■□□□□ 0.61
CTSB-230ENST00000534149 CACNB3P54284 484 aa18.89■□□□□ 0.61
CTSB-230ENST00000534149 CHAF1AQ13111 956 aaPredicted RBP18.89■□□□□ 0.61
CTSB-230ENST00000534149 ARHGEF6Q15052 776 aa18.89■□□□□ 0.61
CTSB-230ENST00000534149 SLC4A10Q6U841 1118 aa18.89■□□□□ 0.61
CTSB-230ENST00000534149 WDR63Q8IWG1 891 aa18.89■□□□□ 0.61
CTSB-230ENST00000534149 SUCLG2Q96I99 432 aa18.89■□□□□ 0.61
CTSB-230ENST00000534149 SLC4A8Q2Y0W8 1093 aa18.88■□□□□ 0.61
CTSB-230ENST00000534149 NBPF11Q86T75 865 aa18.88■□□□□ 0.61
CTSB-230ENST00000534149 KAZALD1Q96I82 304 aa18.88■□□□□ 0.61
CTSB-230ENST00000534149 ARHGAP39Q9C0H5 1083 aa18.88■□□□□ 0.61
CTSB-230ENST00000534149 SPINK5Q9NQ38 1064 aaPredicted RBP18.88■□□□□ 0.61
CTSB-230ENST00000534149 SPDYE5A6NIY4 337 aa18.87■□□□□ 0.61
CTSB-230ENST00000534149 ALDH1L1O75891 902 aa18.87■□□□□ 0.61
CTSB-230ENST00000534149 FXR1P51114 621 aaKnown RBP eCLIP18.87■□□□□ 0.61
CTSB-230ENST00000534149 VPS37DQ86XT2 251 aa18.87■□□□□ 0.61
CTSB-230ENST00000534149 SRCIN1Q9C0H9 1055 aa18.87■□□□□ 0.61
CTSB-230ENST00000534149 RIPOR2Q9Y4F9 1068 aa18.87■□□□□ 0.61
CTSB-230ENST00000534149 SNCAIPQ9Y6H5 919 aa18.87■□□□□ 0.61
CTSB-230ENST00000534149 MROH5Q6ZUA9 1318 aa18.86■□□□□ 0.61
CTSB-230ENST00000534149 FBXO33Q7Z6M2 555 aa18.86■□□□□ 0.61
CTSB-230ENST00000534149 SH3TC2Q8TF17 1288 aa18.86■□□□□ 0.61
CTSB-230ENST00000534149 WRNIP1Q96S55 665 aa18.86■□□□□ 0.61
CTSB-230ENST00000534149 BTBD19C9JJ37 291 aa18.85■□□□□ 0.61
CTSB-230ENST00000534149 TLR2O60603 784 aa18.85■□□□□ 0.61
CTSB-230ENST00000534149 FRAT2O75474 233 aaPredicted RBP18.85■□□□□ 0.61
CTSB-230ENST00000534149 CETPP11597 493 aa18.85■□□□□ 0.61
CTSB-230ENST00000534149 HDLBPQ00341 1268 aaKnown RBP18.85■□□□□ 0.61
CTSB-230ENST00000534149 ZKSCAN4Q969J2 545 aaPredicted RBP18.85■□□□□ 0.61
CTSB-230ENST00000534149 TEKT1Q969V4 418 aa18.85■□□□□ 0.61
CTSB-230ENST00000534149 MRS2Q9HD23 443 aa18.85■□□□□ 0.61
CTSB-230ENST00000534149 IRF6O14896 467 aa18.84■□□□□ 0.61
CTSB-230ENST00000534149 WDHD1O75717 1129 aaPredicted RBP18.84■□□□□ 0.61
CTSB-230ENST00000534149 ECM2O94769 699 aaPredicted RBP18.84■□□□□ 0.61
CTSB-230ENST00000534149 NBPF7P0C2Y1 421 aaPredicted RBP18.84■□□□□ 0.61
CTSB-230ENST00000534149 LACTBP83111 547 aaPredicted RBP18.84■□□□□ 0.61
CTSB-230ENST00000534149 LRRC24Q50LG9 513 aa18.84■□□□□ 0.61
CTSB-230ENST00000534149 METTL24Q5JXM2 366 aa18.84■□□□□ 0.61
CTSB-230ENST00000534149 ERO1BQ86YB8 467 aa18.84■□□□□ 0.61
CTSB-230ENST00000534149 TBC1D22AQ8WUA7 517 aa18.84■□□□□ 0.61
CTSB-230ENST00000534149 BICC1Q9H694 974 aaKnown RBP18.84■□□□□ 0.61
CTSB-230ENST00000534149 TMOD2Q9NZR1 351 aa18.84■□□□□ 0.61
CTSB-230ENST00000534149 COLQQ9Y215 455 aaPredicted RBP18.84■□□□□ 0.61
CTSB-230ENST00000534149 TRIOBPQ9H2D6 2365 aa18.84■□□□□ 0.61
CTSB-230ENST00000534149 SNAPC2Q13487 334 aa18.83■□□□□ 0.6
CTSB-230ENST00000534149 KIF22Q14807 665 aa18.83■□□□□ 0.6
CTSB-230ENST00000534149 CAVIN4Q5BKX8 364 aa18.83■□□□□ 0.6
CTSB-230ENST00000534149 BCAMP50895 628 aa18.82■□□□□ 0.6
CTSB-230ENST00000534149 ZDHHC15Q96MV8 337 aa18.82■□□□□ 0.6
CTSB-230ENST00000534149 ZCCHC17Q9NP64 241 aaKnown RBP18.82■□□□□ 0.6
CTSB-230ENST00000534149 PPIL2Q13356 520 aa18.81■□□□□ 0.6
CTSB-230ENST00000534149 RABL6Q3YEC7 729 aaPredicted RBP18.81■□□□□ 0.6
CTSB-230ENST00000534149 APOBEC3HQ6NTF7 200 aaKnown RBP18.81■□□□□ 0.6
CTSB-230ENST00000534149 FAM83AQ86UY5 434 aa18.81■□□□□ 0.6
CTSB-230ENST00000534149 VGLL2Q8N8G2 317 aa18.81■□□□□ 0.6
CTSB-230ENST00000534149 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
CTSB-230ENST00000534149 UTYO14607 1347 aa18.8■□□□□ 0.6
CTSB-230ENST00000534149 H0YGN5 161 aa18.8■□□□□ 0.6
CTSB-230ENST00000534149 MIGA2Q7L4E1 593 aa18.8■□□□□ 0.6
CTSB-230ENST00000534149 ANKRD44Q8N8A2 993 aa18.8■□□□□ 0.6
CTSB-230ENST00000534149 KLHDC4Q8TBB5 520 aa18.8■□□□□ 0.6
CTSB-230ENST00000534149 HOOK2Q96ED9 719 aa18.8■□□□□ 0.6
CTSB-230ENST00000534149 RPAP1Q9BWH6 1393 aaPredicted RBP18.8■□□□□ 0.6
CTSB-230ENST00000534149 MAST3O60307 1309 aa18.79■□□□□ 0.6
CTSB-230ENST00000534149 PDE8BO95263 885 aa18.79■□□□□ 0.6
CTSB-230ENST00000534149 INPP5BP32019 993 aa18.79■□□□□ 0.6
CTSB-230ENST00000534149 FKBP1CQ5VVH2 108 aa18.79■□□□□ 0.6
CTSB-230ENST00000534149 DCAF15Q66K64 600 aa18.79■□□□□ 0.6
CTSB-230ENST00000534149 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms