RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 XAGE2Q96GT9 111 aa7.34□□□□□ -1.23
CHKA-208ENST00000533910 C2orf49Q9BVC5 232 aaPredicted RBP7.34□□□□□ -1.23
CHKA-208ENST00000533910 LRFN2Q9ULH4 789 aa7.34□□□□□ -1.23
CHKA-208ENST00000533910 HCN4Q9Y3Q4 1203 aa7.34□□□□□ -1.23
CHKA-208ENST00000533910 PKD1L3Q7Z443 1732 aa7.34□□□□□ -1.23
CHKA-208ENST00000533910 PARP4Q9UKK3 1724 aaKnown RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 MEN1O00255 615 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 TNFRSF10BO14763 440 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 ZBTB39O15060 712 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 UPP2O95045 317 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 ZIC2O95409 532 aaPredicted RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 ADH1AP07327 375 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 ZNF853P0CG23 659 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 ERCC3P19447 782 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 RELBQ01201 579 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 CALD1Q05682 793 aaKnown RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 SF3B2Q13435 895 aaKnown RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 ZDHHC1Q8WTX9 485 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 DDX17Q92841 729 aaKnown RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 MRRFQ96E11 262 aaKnown RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 KLF16Q9BXK1 252 aaPredicted RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 QTRT2Q9H974 415 aaKnown RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 CCDC87Q9NVE4 849 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 IQSEC3Q9UPP2 1182 aaPredicted RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 COL16A1Q07092 1604 aaPredicted RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 SIPA1L3O60292 1781 aaPredicted RBP7.33□□□□□ -1.24
CHKA-208ENST00000533910 KDM3BQ7LBC6 1761 aa7.33□□□□□ -1.24
CHKA-208ENST00000533910 H3BM21 787 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 BRD2P25440 801 aaKnown RBP7.32□□□□□ -1.24
CHKA-208ENST00000533910 CENPCQ03188 943 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 MTFR1Q15390 333 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 C16orf46Q6P387 395 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 ATCAYQ86WG3 371 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 COL26A1Q96A83 441 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 IFT57Q9NWB7 429 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 PPP4R2Q9NY27 417 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 DCTN4Q9UJW0 460 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 HRH3Q9Y5N1 445 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 OVOS2A0A0G2JMS6 1433 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 CRB1P82279 1406 aa7.32□□□□□ -1.24
CHKA-208ENST00000533910 PHLPP1O60346 1717 aa7.31□□□□□ -1.24
CHKA-208ENST00000533910 RARSP54136 660 aaKnown RBP7.31□□□□□ -1.24
CHKA-208ENST00000533910 UBE2Q2Q8WVN8 375 aa7.31□□□□□ -1.24
CHKA-208ENST00000533910 TSR2Q969E8 191 aaKnown RBP7.31□□□□□ -1.24
CHKA-208ENST00000533910 ESYT1Q9BSJ8 1104 aa7.31□□□□□ -1.24
CHKA-208ENST00000533910 PLCH1Q4KWH8 1693 aa7.31□□□□□ -1.24
CHKA-208ENST00000533910 MAP3K5Q99683 1374 aa7.31□□□□□ -1.24
CHKA-208ENST00000533910 COL14A1Q05707 1796 aaKnown RBP7.31□□□□□ -1.24
CHKA-208ENST00000533910 SCN11AQ9UI33 1791 aa7.31□□□□□ -1.24
CHKA-208ENST00000533910 WNK3Q9BYP7 1800 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 CDK2AP1O14519 115 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 HTATSF1O43719 755 aaKnown RBP7.3□□□□□ -1.24
CHKA-208ENST00000533910 GMPRP36959 345 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 PTGIRP43119 386 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 EIF1AXP47813 144 aaKnown RBP7.3□□□□□ -1.24
CHKA-208ENST00000533910 VEGFBP49765 207 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 GNAI1P63096 354 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 AAMPQ13685 434 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 MTHFSDQ2M296 383 aaKnown RBP7.3□□□□□ -1.24
CHKA-208ENST00000533910 NBPF6Q5VWK0 638 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 TMC7Q7Z402 723 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.3□□□□□ -1.24
CHKA-208ENST00000533910 NBPF4Q96M43 638 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 ASB16Q96NS5 453 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 THUMPD2Q9BTF0 503 aaKnown RBP7.3□□□□□ -1.24
CHKA-208ENST00000533910 FHDC1Q9C0D6 1143 aaPredicted RBP7.3□□□□□ -1.24
CHKA-208ENST00000533910 ZNF232Q9UNY5 417 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 N4BP2Q86UW6 1770 aaPredicted RBP7.3□□□□□ -1.24
CHKA-208ENST00000533910 KIAA0232Q92628 1395 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 COL5A2P05997 1499 aaPredicted RBP7.3□□□□□ -1.24
CHKA-208ENST00000533910 SHANK3Q9BYB0 1731 aa7.3□□□□□ -1.24
CHKA-208ENST00000533910 FAM83GA6ND36 823 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 EML1O00423 815 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 PLIN1O60240 522 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 MAN1A2O60476 641 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 BCAR3O75815 825 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 FAM13AO94988 1023 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 NPR3P17342 541 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 PSMA6P60900 246 aaKnown RBP7.29□□□□□ -1.24
CHKA-208ENST00000533910 EXOSC9Q06265 439 aaKnown RBP7.29□□□□□ -1.24
CHKA-208ENST00000533910 CLN3Q13286 438 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 Q6ZVU0 165 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 FBXO33Q7Z6M2 555 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 ZNF295-AS1Q8N0V1 137 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 ANKRD24Q8TF21 1146 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 KLRG1Q96E93 195 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 LTV1Q96GA3 475 aaPredicted RBP7.29□□□□□ -1.24
CHKA-208ENST00000533910 KLK14Q9P0G3 267 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 CACNA1FO60840 1977 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 CEMIPQ8WUJ3 1361 aa7.29□□□□□ -1.24
CHKA-208ENST00000533910 MEGF6O75095 1541 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 NRAPQ86VF7 1730 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 CHL1O00533 1208 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 FZD6O60353 706 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 BMP2P12643 396 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 NOS2P35228 1153 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 PDE3AQ14432 1141 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 C6orf118Q5T5N4 469 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 C20orf194Q5TEA3 1177 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms