RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 TMEM39AQ9NV64 488 aa4.81□□□□□ -1.64
ATM-220ENST00000533526 PPM1HQ9ULR3 514 aa4.81□□□□□ -1.64
ATM-220ENST00000533526 AK5Q9Y6K8 562 aa4.81□□□□□ -1.64
ATM-220ENST00000533526 ALX3O95076 343 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 GLB1P16278 677 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 DAB2P98082 770 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 POU4F3Q15319 338 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 HGSNATQ68CP4 663 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 ANKRD34AQ69YU3 496 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 KIAA1211Q6ZU35 1233 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 FBXO33Q7Z6M2 555 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 DZIP1LQ8IYY4 767 aaKnown RBP4.8□□□□□ -1.64
ATM-220ENST00000533526 SETDB2Q96T68 719 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 CORO1BQ9BR76 489 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 CYP4F12Q9HCS2 524 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 SAMM50Q9Y512 469 aa4.8□□□□□ -1.64
ATM-220ENST00000533526 LOC100289279A0A1B0GTE1 492 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 WISP1O95388 367 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 MFAP1P55081 439 aaKnown RBP4.79□□□□□ -1.64
ATM-220ENST00000533526 TRIM26Q12899 539 aaPredicted RBP4.79□□□□□ -1.64
ATM-220ENST00000533526 PSMD2Q13200 908 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 DOC2BQ14184 412 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 UVSSAQ2YD98 709 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 NUTM2GQ5VZR2 741 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 FDX2Q6P4F2 183 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 Q6ZS46 218 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 TMC4Q7Z404 712 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 C3orf58Q8NDZ4 430 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 UBASH3BQ8TF42 649 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 TP53INP1Q96A56 240 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 SSBP4Q9BWG4 385 aaPredicted RBP4.79□□□□□ -1.64
ATM-220ENST00000533526 USP26Q9BXU7 913 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 EMILIN2Q9BXX0 1053 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 TPSG1Q9NRR2 321 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 PARP2Q9UGN5 583 aa4.79□□□□□ -1.64
ATM-220ENST00000533526 GPN3Q9UHW5 284 aaPredicted RBP4.79□□□□□ -1.64
ATM-220ENST00000533526 SART1O43290 800 aaKnown RBP4.78□□□□□ -1.64
ATM-220ENST00000533526 H2AFB1P0C5Y9 115 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 H2AFB2P0C5Z0 115 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 USP17L7P0C7H9 530 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 MAOBP27338 520 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 FAAP100Q0VG06 881 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 SLC51AQ86UW1 340 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 AGGF1Q8N302 714 aaeCLIP4.78□□□□□ -1.64
ATM-220ENST00000533526 C12orf50Q8NA57 414 aaPredicted RBP4.78□□□□□ -1.64
ATM-220ENST00000533526 SMG8Q8ND04 991 aaKnown RBP4.78□□□□□ -1.64
ATM-220ENST00000533526 MEGF10Q96KG7 1140 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 NECAB3Q96P71 396 aaPredicted RBP4.78□□□□□ -1.64
ATM-220ENST00000533526 BCL2L13Q9BXK5 485 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 TMPRSS13Q9BYE2 586 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 NRSN2Q9GZP1 204 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 SUGCTQ9HAC7 445 aa4.78□□□□□ -1.64
ATM-220ENST00000533526 SYNGAP1Q96PV0 1343 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 DHX15O43143 795 aaKnown RBP4.77□□□□□ -1.65
ATM-220ENST00000533526 SORBS3O60504 671 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 SLFN14P0C7P3 912 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 NME2P22392 152 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 ARNTP27540 789 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 ZNF157P51786 506 aaPredicted RBP4.77□□□□□ -1.65
ATM-220ENST00000533526 NKAPLQ5M9Q1 402 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 SV2BQ7L1I2 683 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 FAM46AQ96IP4 442 aaKnown RBP4.77□□□□□ -1.65
ATM-220ENST00000533526 UBL7Q96S82 380 aaPredicted RBP4.77□□□□□ -1.65
ATM-220ENST00000533526 TRIM56Q9BRZ2 755 aaKnown RBP4.77□□□□□ -1.65
ATM-220ENST00000533526 MRS2Q9HD23 443 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 RAD18Q9NS91 495 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 KRT82Q9NSB4 513 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 HIF3AQ9Y2N7 669 aa4.77□□□□□ -1.65
ATM-220ENST00000533526 GSTP1P09211 210 aaKnown RBP4.76□□□□□ -1.65
ATM-220ENST00000533526 FURINP09958 794 aa4.76□□□□□ -1.65
ATM-220ENST00000533526 LRRC14Q15048 493 aa4.76□□□□□ -1.65
ATM-220ENST00000533526 RSPO4Q2I0M5 234 aaPredicted RBP4.76□□□□□ -1.65
ATM-220ENST00000533526 SCARA3Q6AZY7 606 aa4.76□□□□□ -1.65
ATM-220ENST00000533526 TPTE2Q6XPS3 522 aa4.76□□□□□ -1.65
ATM-220ENST00000533526 CYP8B1Q9UNU6 501 aa4.76□□□□□ -1.65
ATM-220ENST00000533526 DLGAP3O95886 979 aa4.75□□□□□ -1.65
ATM-220ENST00000533526 RLBP1P12271 317 aa4.75□□□□□ -1.65
ATM-220ENST00000533526 SOX4Q06945 474 aaPredicted RBP4.75□□□□□ -1.65
ATM-220ENST00000533526 PDE3AQ14432 1141 aa4.75□□□□□ -1.65
ATM-220ENST00000533526 TAF1CQ15572 869 aaPredicted RBP4.75□□□□□ -1.65
ATM-220ENST00000533526 PRR23CQ6ZRP0 262 aa4.75□□□□□ -1.65
ATM-220ENST00000533526 SULF2Q8IWU5 870 aa4.75□□□□□ -1.65
ATM-220ENST00000533526 UTP4Q969X6 686 aaKnown RBP4.75□□□□□ -1.65
ATM-220ENST00000533526 MYRFLQ96LU7 910 aa4.75□□□□□ -1.65
ATM-220ENST00000533526 TTF2Q9UNY4 1162 aaKnown RBP4.75□□□□□ -1.65
ATM-220ENST00000533526 RAXQ9Y2V3 346 aa4.75□□□□□ -1.65
ATM-220ENST00000533526 K7ELQ4 463 aaPredicted RBP4.74□□□□□ -1.65
ATM-220ENST00000533526 ENC1O14682 589 aa4.74□□□□□ -1.65
ATM-220ENST00000533526 GAS2O43903 313 aaKnown RBP4.74□□□□□ -1.65
ATM-220ENST00000533526 TIAF1O95411 115 aa4.74□□□□□ -1.65
ATM-220ENST00000533526 ST13P50502 369 aaKnown RBP4.74□□□□□ -1.65
ATM-220ENST00000533526 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.74□□□□□ -1.65
ATM-220ENST00000533526 CLEC10AQ8IUN9 316 aa4.74□□□□□ -1.65
ATM-220ENST00000533526 GIPC2Q8TF65 315 aa4.74□□□□□ -1.65
ATM-220ENST00000533526 KCNB2Q92953 911 aa4.74□□□□□ -1.65
ATM-220ENST00000533526 YIPF2Q9BWQ6 316 aa4.74□□□□□ -1.65
ATM-220ENST00000533526 SEMA6BQ9H3T3 888 aa4.74□□□□□ -1.65
ATM-220ENST00000533526 CBX8Q9HC52 389 aa4.74□□□□□ -1.65
ATM-220ENST00000533526 STOML1Q9UBI4 398 aa4.74□□□□□ -1.65
ATM-220ENST00000533526 USP31Q70CQ4 1352 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms