RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 FRAT2O75474 233 aaPredicted RBP12.15□□□□□ -0.46
NUP98-220ENST00000533346 SURF6O75683 361 aaKnown RBP12.15□□□□□ -0.46
NUP98-220ENST00000533346 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
NUP98-220ENST00000533346 PHKA1P46020 1223 aa12.15□□□□□ -0.46
NUP98-220ENST00000533346 CRKP46108 304 aa12.15□□□□□ -0.46
NUP98-220ENST00000533346 MAP3K11Q16584 847 aa12.15□□□□□ -0.46
NUP98-220ENST00000533346 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
NUP98-220ENST00000533346 HSP90AB4PQ58FF6 505 aa12.15□□□□□ -0.46
NUP98-220ENST00000533346 FKBP1CQ5VVH2 108 aa12.15□□□□□ -0.46
NUP98-220ENST00000533346 C2orf69Q8N8R5 385 aa12.15□□□□□ -0.46
NUP98-220ENST00000533346 C1orf115Q9H7X2 142 aa12.15□□□□□ -0.46
NUP98-220ENST00000533346 MKRN1Q9UHC7 482 aaKnown RBP12.15□□□□□ -0.46
NUP98-220ENST00000533346 ABT1Q9ULW3 272 aaKnown RBP12.15□□□□□ -0.46
NUP98-220ENST00000533346 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
NUP98-220ENST00000533346 MYH2Q9UKX2 1941 aa12.14□□□□□ -0.47
NUP98-220ENST00000533346 FOXN1O15353 648 aa12.14□□□□□ -0.47
NUP98-220ENST00000533346 ADORA1P30542 326 aa12.14□□□□□ -0.47
NUP98-220ENST00000533346 GRIK5Q16478 980 aa12.14□□□□□ -0.47
NUP98-220ENST00000533346 TNNI3KQ59H18 835 aa12.14□□□□□ -0.47
NUP98-220ENST00000533346 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
NUP98-220ENST00000533346 TEKT1Q969V4 418 aa12.14□□□□□ -0.47
NUP98-220ENST00000533346 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
NUP98-220ENST00000533346 IQSEC3Q9UPP2 1182 aaPredicted RBP12.14□□□□□ -0.47
NUP98-220ENST00000533346 JAG2Q9Y219 1238 aa12.14□□□□□ -0.47
NUP98-220ENST00000533346 FPGT-TNNI3KV9GXZ4 949 aa12.14□□□□□ -0.47
NUP98-220ENST00000533346 F8W031 263 aaPredicted RBP12.13□□□□□ -0.47
NUP98-220ENST00000533346 HMMRO75330 724 aa12.13□□□□□ -0.47
NUP98-220ENST00000533346 UQCRFS1P1P0C7P4 283 aa12.13□□□□□ -0.47
NUP98-220ENST00000533346 CHAF1AQ13111 956 aaPredicted RBP12.13□□□□□ -0.47
NUP98-220ENST00000533346 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
NUP98-220ENST00000533346 RASGRF1Q13972 1273 aa12.13□□□□□ -0.47
NUP98-220ENST00000533346 APOBEC3HQ6NTF7 200 aaKnown RBP12.13□□□□□ -0.47
NUP98-220ENST00000533346 DLK2Q6UY11 383 aa12.13□□□□□ -0.47
NUP98-220ENST00000533346 SIRT2Q8IXJ6 389 aa12.13□□□□□ -0.47
NUP98-220ENST00000533346 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
NUP98-220ENST00000533346 CAPNS2Q96L46 248 aa12.13□□□□□ -0.47
NUP98-220ENST00000533346 DEFB129Q9H1M3 183 aa12.13□□□□□ -0.47
NUP98-220ENST00000533346 PCDHAC2Q9Y5I4 1007 aa12.13□□□□□ -0.47
NUP98-220ENST00000533346 FAM155AB1AL88 458 aaPredicted RBP12.12□□□□□ -0.47
NUP98-220ENST00000533346 SLC34A2O95436 690 aa12.12□□□□□ -0.47
NUP98-220ENST00000533346 NF2P35240 595 aa12.12□□□□□ -0.47
NUP98-220ENST00000533346 HUNKP57058 714 aa12.12□□□□□ -0.47
NUP98-220ENST00000533346 C20orf194Q5TEA3 1177 aa12.12□□□□□ -0.47
NUP98-220ENST00000533346 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
NUP98-220ENST00000533346 FAM83AQ86UY5 434 aa12.12□□□□□ -0.47
NUP98-220ENST00000533346 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
NUP98-220ENST00000533346 ZNF70Q9UC06 446 aaPredicted RBP12.12□□□□□ -0.47
NUP98-220ENST00000533346 GAKO14976 1311 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 AOX1Q06278 1338 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 RPAP1Q9BWH6 1393 aaPredicted RBP12.11□□□□□ -0.47
NUP98-220ENST00000533346 RAB11FIP3O75154 756 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 MAP4K4O95819 1239 aaPredicted RBP12.11□□□□□ -0.47
NUP98-220ENST00000533346 LDHBP07195 334 aaKnown RBP12.11□□□□□ -0.47
NUP98-220ENST00000533346 PRDX5P30044 214 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 MAP2K1Q02750 393 aaPredicted RBP12.11□□□□□ -0.47
NUP98-220ENST00000533346 NOGQ13253 232 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 SUPT20HL1Q3ZLR7 823 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 LDLRAD1Q5T700 205 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
NUP98-220ENST00000533346 CYP4F22Q6NT55 531 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 TMED8Q6PL24 325 aaPredicted RBP12.11□□□□□ -0.47
NUP98-220ENST00000533346 REM2Q8IYK8 340 aaPredicted RBP12.11□□□□□ -0.47
NUP98-220ENST00000533346 NEUROD6Q96NK8 337 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 TDRD3Q9H7E2 651 aaKnown RBP12.11□□□□□ -0.47
NUP98-220ENST00000533346 ZNF408Q9H9D4 720 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 HMG20BQ9P0W2 317 aa12.11□□□□□ -0.47
NUP98-220ENST00000533346 TNNI2P48788 182 aa12.1□□□□□ -0.47
NUP98-220ENST00000533346 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP98-220ENST00000533346 CCDC158Q5M9N0 1113 aa12.1□□□□□ -0.47
NUP98-220ENST00000533346 SLF2Q8IX21 1173 aa12.1□□□□□ -0.47
NUP98-220ENST00000533346 SPATA5Q8NB90 893 aa12.1□□□□□ -0.47
NUP98-220ENST00000533346 EAF2Q96CJ1 260 aaPredicted RBP12.1□□□□□ -0.47
NUP98-220ENST00000533346 KIF1BPQ96EK5 621 aa12.1□□□□□ -0.47
NUP98-220ENST00000533346 TEPSINQ96N21 525 aa12.1□□□□□ -0.47
NUP98-220ENST00000533346 SSC5DA1L4H1 1573 aa12.09□□□□□ -0.47
NUP98-220ENST00000533346 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
NUP98-220ENST00000533346 SLC10A3P09131 477 aa12.09□□□□□ -0.47
NUP98-220ENST00000533346 MCAMP43121 646 aa12.09□□□□□ -0.47
NUP98-220ENST00000533346 RRP1P56182 461 aaKnown RBP12.09□□□□□ -0.47
NUP98-220ENST00000533346 OS9Q13438 667 aaPredicted RBP12.09□□□□□ -0.47
NUP98-220ENST00000533346 AAMPQ13685 434 aa12.09□□□□□ -0.47
NUP98-220ENST00000533346 RASA3Q14644 834 aa12.09□□□□□ -0.47
NUP98-220ENST00000533346 RHPN1Q8TCX5 695 aa12.09□□□□□ -0.47
NUP98-220ENST00000533346 DBNDD2Q9BQY9 259 aa12.09□□□□□ -0.47
NUP98-220ENST00000533346 DBNLQ9UJU6 430 aaKnown RBP12.09□□□□□ -0.47
NUP98-220ENST00000533346 DAGLAQ9Y4D2 1042 aa12.09□□□□□ -0.47
NUP98-220ENST00000533346 DOCK2Q92608 1830 aa12.09□□□□□ -0.47
NUP98-220ENST00000533346 MYO5AQ9Y4I1 1855 aaKnown RBP12.08□□□□□ -0.48
NUP98-220ENST00000533346 MAST2Q6P0Q8 1798 aa12.08□□□□□ -0.48
NUP98-220ENST00000533346 CLRN2A0PK11 232 aa12.08□□□□□ -0.48
NUP98-220ENST00000533346 PPP1R12BO60237 982 aaPredicted RBP12.08□□□□□ -0.48
NUP98-220ENST00000533346 GORABQ5T7V8 394 aa12.08□□□□□ -0.48
NUP98-220ENST00000533346 PRAMEF18Q5VWM3 479 aa12.08□□□□□ -0.48
NUP98-220ENST00000533346 ERICH6Q7L0X2 663 aa12.08□□□□□ -0.48
NUP98-220ENST00000533346 ARMC9Q7Z3E5 817 aa12.08□□□□□ -0.48
NUP98-220ENST00000533346 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.08□□□□□ -0.48
NUP98-220ENST00000533346 IDI2Q9BXS1 227 aa12.08□□□□□ -0.48
NUP98-220ENST00000533346 EXOC6BQ9Y2D4 811 aa12.08□□□□□ -0.48
NUP98-220ENST00000533346 GPR75-ASB3A0A0A6YYF3 556 aa12.07□□□□□ -0.48
NUP98-220ENST00000533346 CA12O43570 354 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms