RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
LMO7-223	ENST00000533299	CEP135	Q66GS9	1140 aa		5.68	□□□□□ -1.5
LMO7-223	ENST00000533299	WFDC8	Q8IUA0	241 aa		5.68	□□□□□ -1.5
LMO7-223	ENST00000533299	DCAF11	Q8TEB1	546 aa		5.68	□□□□□ -1.5
LMO7-223	ENST00000533299	DZANK1	Q9NVP4	752 aa		5.68	□□□□□ -1.5
LMO7-223	ENST00000533299	PDE2A	O00408	941 aa	Predicted RBP	5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	ALX3	O95076	343 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	PTPRA	P18433	802 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	GNA15	P30679	374 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	PSMD2	Q13200	908 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	TMEM102	Q8N9M5	508 aa	Predicted RBP	5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	EPS8L3	Q8TE67	593 aa	Known RBP	5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	FBXL18	Q96ME1	805 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	DUSP9	Q99956	384 aa	Known RBP	5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	LPIN3	Q9BQK8	851 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	ZKSCAN3	Q9BRR0	538 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	MUC3B	Q9H195	1237 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	RASSF4	Q9H2L5	321 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	LIN7B	Q9HAP6	207 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	WWC3	Q9ULE0	1092 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299		A0A1W2PP55	124 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	CABP4	P57796	275 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	GRIK5	Q16478	980 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	PARP2	Q9UGN5	583 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	NAGPA	Q9UK23	515 aa		5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	ANGEL1	Q9UNK9	670 aa	Known RBP	5.67	□□□□□ -1.5
LMO7-223	ENST00000533299	DEAF1	O75398	565 aa	Predicted RBP	5.66	□□□□□ -1.5
LMO7-223	ENST00000533299	XRCC5	P13010	732 aa	Known RBP	5.66	□□□□□ -1.5
LMO7-223	ENST00000533299	ZNF16	P17020	682 aa	Predicted RBP	5.66	□□□□□ -1.5
LMO7-223	ENST00000533299	EIF4B	P23588	611 aa	Known RBP	5.66	□□□□□ -1.5
LMO7-223	ENST00000533299	PEAR1	Q5VY43	1037 aa	Predicted RBP	5.66	□□□□□ -1.5
LMO7-223	ENST00000533299	BCO2	Q9BYV7	579 aa		5.66	□□□□□ -1.5
LMO7-223	ENST00000533299	LATS2	Q9NRM7	1088 aa		5.66	□□□□□ -1.5
LMO7-223	ENST00000533299	JAG2	Q9Y219	1238 aa		5.66	□□□□□ -1.5
LMO7-223	ENST00000533299	SORBS3	O60504	671 aa		5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	EIF4EBP3	O60516	100 aa	Predicted RBP	5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	FARP2	O94887	1054 aa	Predicted RBP	5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	BUD31	P41223	144 aa	Predicted RBP	5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	ATP11A	P98196	1134 aa		5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	GDF6	Q6KF10	455 aa	Predicted RBP	5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	FAM117B	Q6P1L5	589 aa		5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	TMC4	Q7Z404	712 aa		5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	ASAP3	Q8TDY4	903 aa		5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	NXPE3	Q969Y0	559 aa		5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	BHLHE41	Q9C0J9	482 aa	Predicted RBP	5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	FAM8A1	Q9UBU6	413 aa		5.65	□□□□□ -1.5
LMO7-223	ENST00000533299	CDC27	P30260	824 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	GSTT1	P30711	240 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	DAB2	P98082	770 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	PRPF40B	Q6NWY9	871 aa	Known RBP	5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	CCNJL	Q8IV13	435 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	BSND	Q8WZ55	320 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	C12orf49	Q9H741	205 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	AK5	Q9Y6K8	562 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	PTPN12	Q05209	780 aa	Known RBP	5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	GRM2	Q14416	872 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	UVSSA	Q2YD98	709 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	DTHD1	Q6ZMT9	781 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	POP1	Q99575	1024 aa	Known RBP	5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	LACRT	Q9GZZ8	138 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	C7orf69	Q9H7B7	122 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	SRA1	Q9HD15	236 aa	Known RBP	5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	RAPGEFL1	Q9UHV5	662 aa		5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	5.64	□□□□□ -1.51
LMO7-223	ENST00000533299	TMEM238L	A0A1B0GVL6	79 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	NFKBIE	O00221	500 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	ACPP	P15309	386 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	NXPE4	Q6UWF7	544 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	PI16	Q6UXB8	463 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	IL22RA1	Q8N6P7	574 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	DDX54	Q8TDD1	881 aa	Known RBP	5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	SETDB2	Q96T68	719 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	TCF12	Q99081	682 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	ADAM19	Q9H013	955 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	VTI1B	Q9UEU0	232 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	TRIM33	Q9UPN9	1127 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299	PPME1	Q9Y570	386 aa		5.63	□□□□□ -1.51
LMO7-223	ENST00000533299		A0A096LPE4	126 aa		5.62	□□□□□ -1.51
LMO7-223	ENST00000533299		A0A1W2PPZ6	126 aa		5.62	□□□□□ -1.51
LMO7-223	ENST00000533299	TRPA1	O75762	1119 aa		5.62	□□□□□ -1.51
LMO7-223	ENST00000533299	PRNP	P04156	253 aa		5.62	□□□□□ -1.51
LMO7-223	ENST00000533299	GLB1	P16278	677 aa		5.62	□□□□□ -1.51
LMO7-223	ENST00000533299	ARL4D	P49703	201 aa		5.62	□□□□□ -1.51
LMO7-223	ENST00000533299	FCGRT	P55899	365 aa		5.62	□□□□□ -1.51
LMO7-223	ENST00000533299	MAP4K3	Q8IVH8	894 aa		5.62	□□□□□ -1.51
LMO7-223	ENST00000533299	ITPKA	P23677	461 aa		5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	RBM25	P49756	843 aa	Known RBP	5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	TAGLN	Q01995	201 aa	Known RBP	5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	TRIM42	Q8IWZ5	723 aa		5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	ARMC10	Q8N2F6	343 aa		5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	WNT8B	Q93098	351 aa		5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	UBL7	Q96S82	380 aa	Predicted RBP	5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	CEP41	Q9BYV8	373 aa		5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	OSBPL7	Q9BZF2	842 aa		5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	CLEC4M	Q9H2X3	399 aa	Predicted RBP	5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	ABCB6	Q9NP58	842 aa		5.61	□□□□□ -1.51
LMO7-223	ENST00000533299	PPM1H	Q9ULR3	514 aa		5.61	□□□□□ -1.51
LMO7-223	ENST00000533299		H3BRJ5	948 aa		5.6	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms