RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ZNF174Q15697 407 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 CCDC178Q5BJE1 867 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 UIMC1Q96RL1 719 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 CNNM2Q9H8M5 875 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 NEMFO60524 1076 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 LDHCP07864 332 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 ADD1P35611 737 aaKnown RBP13.95□□□□□ -0.18
BDNF-218ENST00000533246 CBX8Q9HC52 389 aa13.95□□□□□ -0.18
BDNF-218ENST00000533246 SLFNL1Q499Z3 407 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 FKBP15Q5T1M5 1219 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 TMTC2Q8N394 836 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 HELLSQ9NRZ9 838 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 KCNJ14Q9UNX9 436 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 MTMR6Q9Y217 621 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 IGSF1Q8N6C5 1336 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 UBAP1LF5GYI3 381 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 RIMBP2O15034 1052 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 ATP5JP18859 108 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 KARSQ15046 597 aaKnown RBP13.94□□□□□ -0.18
BDNF-218ENST00000533246 TTC6Q86TZ1 520 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 GPIHBP1Q8IV16 184 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 TMOD2Q9NZR1 351 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
BDNF-218ENST00000533246 E7EWF7 191 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 ZNF589Q86UQ0 364 aaPredicted RBP13.94□□□□□ -0.18
BDNF-218ENST00000533246 BCL2L12Q9HB09 334 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 CEP83Q9Y592 693 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 ARHGEF10O15013 1369 aa13.94□□□□□ -0.18
BDNF-218ENST00000533246 VWA3AA6NCI4 1184 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 MYO1BO43795 1136 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 PI16Q6UXB8 463 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 ZNF397Q8NF99 534 aaPredicted RBP13.93□□□□□ -0.18
BDNF-218ENST00000533246 LUC7LQ9NQ29 371 aaKnown RBP13.93□□□□□ -0.18
BDNF-218ENST00000533246 KCNG1Q9UIX4 513 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 ANGEL1Q9UNK9 670 aaKnown RBP13.93□□□□□ -0.18
BDNF-218ENST00000533246 KCNQ4P56696 695 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 FAM160A1Q05DH4 1040 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 E2F4Q16254 413 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 HS1BP3Q53T59 392 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 RPAINQ86UA6 219 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 ARHGEF25Q86VW2 580 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.93□□□□□ -0.18
BDNF-218ENST00000533246 ASAP1Q9ULH1 1129 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 TPTE2Q6XPS3 522 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 TICAM2Q86XR7 235 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 LZTFL1Q9NQ48 299 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 SLAIN2Q9P270 581 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 ZNF532Q9HCE3 1301 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 NR1I2O75469 434 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 YEATS4O95619 227 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 ERCC3P19447 782 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 TRIM21P19474 475 aaKnown RBP13.93□□□□□ -0.18
BDNF-218ENST00000533246 STAT6P42226 847 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 SYT10Q6XYQ8 523 aa13.93□□□□□ -0.18
BDNF-218ENST00000533246 KDM5AP29375 1690 aaKnown RBP13.92□□□□□ -0.18
BDNF-218ENST00000533246 MAP2K2P36507 400 aa13.92□□□□□ -0.18
BDNF-218ENST00000533246 BIRC2Q13490 618 aa13.92□□□□□ -0.18
BDNF-218ENST00000533246 DIS3L2Q8IYB7 885 aaKnown RBP13.92□□□□□ -0.18
BDNF-218ENST00000533246 USP28Q96RU2 1077 aa13.92□□□□□ -0.18
BDNF-218ENST00000533246 MYO5CQ9NQX4 1742 aa13.92□□□□□ -0.18
BDNF-218ENST00000533246 GNPATO15228 680 aa13.92□□□□□ -0.18
BDNF-218ENST00000533246 ADORA1P30542 326 aa13.92□□□□□ -0.18
BDNF-218ENST00000533246 LSG1Q9H089 658 aaKnown RBP13.92□□□□□ -0.18
BDNF-218ENST00000533246 AOX1Q06278 1338 aa13.92□□□□□ -0.18
BDNF-218ENST00000533246 SETD1BQ9UPS6 1966 aaKnown RBP13.92□□□□□ -0.18
BDNF-218ENST00000533246 LARGE1O95461 756 aa13.92□□□□□ -0.18
BDNF-218ENST00000533246 EIF6P56537 245 aaKnown RBP13.92□□□□□ -0.18
BDNF-218ENST00000533246 TMEM266Q2M3C6 531 aa13.92□□□□□ -0.18
BDNF-218ENST00000533246 ANO1Q5XXA6 986 aa13.92□□□□□ -0.18
BDNF-218ENST00000533246 CPSF2Q9P2I0 782 aaKnown RBP13.92□□□□□ -0.18
BDNF-218ENST00000533246 SAP30BPQ9UHR5 308 aaKnown RBP13.92□□□□□ -0.18
BDNF-218ENST00000533246 LRMPQ12912 555 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 TCIRG1Q13488 830 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 CCDC40Q4G0X9 1142 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 MMRN2Q9H8L6 949 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 NAPAP54920 295 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 CALML4Q96GE6 196 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 RAB34Q9BZG1 259 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 FTOQ9C0B1 505 aaKnown RBP eCLIP13.91□□□□□ -0.18
BDNF-218ENST00000533246 HSPD1P10809 573 aaKnown RBP13.91□□□□□ -0.18
BDNF-218ENST00000533246 CCDC148Q8NFR7 591 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 CRACR2AQ9BSW2 395 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 ZSWIM6Q9HCJ5 1215 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 STAP2Q9UGK3 403 aa13.91□□□□□ -0.18
BDNF-218ENST00000533246 POLR2DO15514 142 aaKnown RBP13.9□□□□□ -0.18
BDNF-218ENST00000533246 FGAP02671 866 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 CCDC172P0C7W6 258 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 FAM43BQ6ZT52 329 aaPredicted RBP13.9□□□□□ -0.18
BDNF-218ENST00000533246 JADE2Q9NQC1 790 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 AATKQ6ZMQ8 1374 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 AKR1B10O60218 316 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
BDNF-218ENST00000533246 CYP21A2P08686 494 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 LMAN1P49257 510 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 CHMP4BP1P59074 171 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 ASIC1P78348 528 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 ARID5AQ03989 594 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 MCM6Q14566 821 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms