RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 FARP2O94887 1054 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-213ENST00000533149 CAPN2P17655 700 aa14.37□□□□□ -0.11
TRAPPC4-213ENST00000533149 UBXN2AP68543 259 aa14.37□□□□□ -0.11
TRAPPC4-213ENST00000533149 CNKSR2Q8WXI2 1034 aa14.37□□□□□ -0.11
TRAPPC4-213ENST00000533149 PHAXQ9H814 394 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-213ENST00000533149 STXBP5LQ9Y2K9 1186 aa14.37□□□□□ -0.11
TRAPPC4-213ENST00000533149 RIPOR2Q9Y4F9 1068 aa14.37□□□□□ -0.11
TRAPPC4-213ENST00000533149 SLFN5Q08AF3 891 aa14.36□□□□□ -0.11
TRAPPC4-213ENST00000533149 DEFB123Q8N688 67 aa14.36□□□□□ -0.11
TRAPPC4-213ENST00000533149 MPHOSPH8Q99549 860 aa14.36□□□□□ -0.11
TRAPPC4-213ENST00000533149 BIN2Q9UBW5 565 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC4-213ENST00000533149 OTOFQ9HC10 1997 aa14.35□□□□□ -0.11
TRAPPC4-213ENST00000533149 SPDYE5A6NIY4 337 aa14.35□□□□□ -0.11
TRAPPC4-213ENST00000533149 PSMC4P43686 418 aa14.35□□□□□ -0.11
TRAPPC4-213ENST00000533149 SNAPC2Q13487 334 aa14.35□□□□□ -0.11
TRAPPC4-213ENST00000533149 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
TRAPPC4-213ENST00000533149 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.35□□□□□ -0.11
TRAPPC4-213ENST00000533149 U2AF1L4Q8WU68 220 aaKnown RBP14.35□□□□□ -0.11
TRAPPC4-213ENST00000533149 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-213ENST00000533149 STAP2Q9UGK3 403 aa14.35□□□□□ -0.11
TRAPPC4-213ENST00000533149 BTBD19C9JJ37 291 aa14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 E9PSI1 815 aa14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 FMNL1O95466 1100 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 IL1R1P14778 569 aa14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 TNNI2P48788 182 aa14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 C17orf99Q6UX52 265 aa14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 C15orf52Q6ZUT6 534 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 ZNF804AQ7Z570 1209 aa14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 ERO1BQ86YB8 467 aa14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 TRMT2AQ8IZ69 625 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 COL25A1Q9BXS0 654 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 ZNF70Q9UC06 446 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-213ENST00000533149 RANBP2P49792 3224 aaKnown RBP14.33□□□□□ -0.11
TRAPPC4-213ENST00000533149 MYPNQ86TC9 1320 aa14.33□□□□□ -0.11
TRAPPC4-213ENST00000533149 SPEF2Q9C093 1822 aa14.33□□□□□ -0.12
TRAPPC4-213ENST00000533149 SGPL1O95470 568 aa14.33□□□□□ -0.12
TRAPPC4-213ENST00000533149 OSBPP22059 807 aa14.33□□□□□ -0.12
TRAPPC4-213ENST00000533149 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-213ENST00000533149 BMP8BP34820 402 aa14.33□□□□□ -0.12
TRAPPC4-213ENST00000533149 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-213ENST00000533149 CHRNDQ07001 517 aa14.33□□□□□ -0.12
TRAPPC4-213ENST00000533149 TEPSINQ96N21 525 aa14.33□□□□□ -0.12
TRAPPC4-213ENST00000533149 CHMP4AQ9BY43 222 aa14.33□□□□□ -0.12
TRAPPC4-213ENST00000533149 AOX1Q06278 1338 aa14.32□□□□□ -0.12
TRAPPC4-213ENST00000533149 COL6A3P12111 3177 aa14.32□□□□□ -0.12
TRAPPC4-213ENST00000533149 CUL9Q8IWT3 2517 aa14.32□□□□□ -0.12
TRAPPC4-213ENST00000533149 ZSWIM8A7E2V4 1837 aa14.32□□□□□ -0.12
TRAPPC4-213ENST00000533149 ITGA6P23229 1130 aa14.32□□□□□ -0.12
TRAPPC4-213ENST00000533149 NEXNQ0ZGT2 675 aa14.32□□□□□ -0.12
TRAPPC4-213ENST00000533149 SLAIN1Q8ND83 568 aa14.32□□□□□ -0.12
TRAPPC4-213ENST00000533149 SERPINA10Q9UK55 444 aa14.32□□□□□ -0.12
TRAPPC4-213ENST00000533149 MAP3K2Q9Y2U5 619 aa14.32□□□□□ -0.12
TRAPPC4-213ENST00000533149 ECM2O94769 699 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-213ENST00000533149 CTGFP29279 349 aa14.31□□□□□ -0.12
TRAPPC4-213ENST00000533149 TDRD3Q9H7E2 651 aaKnown RBP14.31□□□□□ -0.12
TRAPPC4-213ENST00000533149 CPA4Q9UI42 421 aa14.31□□□□□ -0.12
TRAPPC4-213ENST00000533149 MYH3P11055 1940 aa14.31□□□□□ -0.12
TRAPPC4-213ENST00000533149 IL16Q14005 1332 aa14.31□□□□□ -0.12
TRAPPC4-213ENST00000533149 TCP10L2B9ZVM9 353 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 IRF6O14896 467 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 IGKV5-2P06315 115 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 PPIL2Q13356 520 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 LRIT3Q3SXY7 679 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 KSR2Q6VAB6 950 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 HOOK2Q96ED9 719 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 GDF15Q99988 308 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 TMEM39BQ9GZU3 492 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 MBIPQ9NS73 344 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 MTMR10Q9NXD2 777 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 SNCAIPQ9Y6H5 919 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 IRS2Q9Y4H2 1338 aa14.3□□□□□ -0.12
TRAPPC4-213ENST00000533149 TFRCP02786 760 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-213ENST00000533149 FCGRTP55899 365 aa14.29□□□□□ -0.12
TRAPPC4-213ENST00000533149 UBE3BQ7Z3V4 1068 aa14.29□□□□□ -0.12
TRAPPC4-213ENST00000533149 ANKRD23Q86SG2 305 aa14.29□□□□□ -0.12
TRAPPC4-213ENST00000533149 CDAN1Q8IWY9 1227 aa14.29□□□□□ -0.12
TRAPPC4-213ENST00000533149 DZIP1LQ8IYY4 767 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-213ENST00000533149 PLA2G12BQ9BX93 195 aa14.29□□□□□ -0.12
TRAPPC4-213ENST00000533149 UNC93B1Q9H1C4 597 aa14.29□□□□□ -0.12
TRAPPC4-213ENST00000533149 MYH16Q9H6N6 1097 aa14.29□□□□□ -0.12
TRAPPC4-213ENST00000533149 A0A0C4DFX4 3053 aa14.29□□□□□ -0.12
TRAPPC4-213ENST00000533149 H7C1W4 665 aa14.28□□□□□ -0.12
TRAPPC4-213ENST00000533149 PRKCZQ05513 592 aa14.28□□□□□ -0.12
TRAPPC4-213ENST00000533149 CCDC30Q5VVM6 783 aa14.28□□□□□ -0.12
TRAPPC4-213ENST00000533149 Q7L0L9 218 aa14.28□□□□□ -0.12
TRAPPC4-213ENST00000533149 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRAPPC4-213ENST00000533149 WRNIP1Q96S55 665 aa14.28□□□□□ -0.12
TRAPPC4-213ENST00000533149 TTF2Q9UNY4 1162 aaKnown RBP14.28□□□□□ -0.12
TRAPPC4-213ENST00000533149 JAG2Q9Y219 1238 aa14.28□□□□□ -0.12
TRAPPC4-213ENST00000533149 ANKRD18BA2A2Z9 1011 aa14.27□□□□□ -0.12
TRAPPC4-213ENST00000533149 PI4KAP2A4QPH2 592 aa14.27□□□□□ -0.12
TRAPPC4-213ENST00000533149 NEURL1BA8MQ27 555 aa14.27□□□□□ -0.12
TRAPPC4-213ENST00000533149 PDHXO00330 501 aa14.27□□□□□ -0.12
TRAPPC4-213ENST00000533149 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.12
TRAPPC4-213ENST00000533149 TAF5LO75529 589 aa14.27□□□□□ -0.12
TRAPPC4-213ENST00000533149 CSF1RP07333 972 aa14.27□□□□□ -0.12
TRAPPC4-213ENST00000533149 PPATQ06203 517 aa14.27□□□□□ -0.12
TRAPPC4-213ENST00000533149 MFSD14BQ5SR56 506 aa14.27□□□□□ -0.12
TRAPPC4-213ENST00000533149 PI4KAP1Q8N8J0 262 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms