RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 ECM29Q5VYK3 1845 aa17.12■□□□□ 0.33
TRIM3-212ENST00000533064 CDK5RAP2Q96SN8 1893 aa17.12■□□□□ 0.33
TRIM3-212ENST00000533064 YDJCA8MPS7 323 aa17.11■□□□□ 0.33
TRIM3-212ENST00000533064 REC8O95072 547 aa17.11■□□□□ 0.33
TRIM3-212ENST00000533064 SEC24BO95487 1268 aa17.11■□□□□ 0.33
TRIM3-212ENST00000533064 MFAP1P55081 439 aaKnown RBP17.11■□□□□ 0.33
TRIM3-212ENST00000533064 FKBP1AP62942 108 aaKnown RBP17.11■□□□□ 0.33
TRIM3-212ENST00000533064 GSTO1P78417 241 aa17.11■□□□□ 0.33
TRIM3-212ENST00000533064 MCMDC2Q4G0Z9 681 aa17.11■□□□□ 0.33
TRIM3-212ENST00000533064 ZMYM1Q5SVZ6 1142 aa17.11■□□□□ 0.33
TRIM3-212ENST00000533064 NAA16Q6N069 864 aaPredicted RBP17.11■□□□□ 0.33
TRIM3-212ENST00000533064 FAM227BQ96M60 508 aa17.11■□□□□ 0.33
TRIM3-212ENST00000533064 UPF2Q9HAU5 1272 aaKnown RBP17.11■□□□□ 0.33
TRIM3-212ENST00000533064 ZNF532Q9HCE3 1301 aa17.11■□□□□ 0.33
TRIM3-212ENST00000533064 A0A0D9SFI3 127 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 GRIN3BO60391 1043 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 MECOMQ03112 1051 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 KIAA1211Q6ZU35 1233 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 SLF2Q8IX21 1173 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 MAST3O60307 1309 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 SGSM2O43147 1006 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 LDHCP07864 332 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 CYP7A1P22680 504 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 NSUN4Q96CB9 384 aaKnown RBP17.1■□□□□ 0.33
TRIM3-212ENST00000533064 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
TRIM3-212ENST00000533064 BAZ2AQ9UIF9 1905 aaKnown RBP17.09■□□□□ 0.33
TRIM3-212ENST00000533064 RAD17O75943 681 aa17.09■□□□□ 0.33
TRIM3-212ENST00000533064 EIF6P56537 245 aaKnown RBP17.09■□□□□ 0.33
TRIM3-212ENST00000533064 DACT2Q5SW24 774 aa17.09■□□□□ 0.33
TRIM3-212ENST00000533064 TCRBV5S4A2TA0A5A2 114 aa17.08■□□□□ 0.32
TRIM3-212ENST00000533064 CHGBP05060 677 aa17.08■□□□□ 0.32
TRIM3-212ENST00000533064 TNIP1Q15025 636 aa17.08■□□□□ 0.32
TRIM3-212ENST00000533064 FOCADQ5VW36 1801 aa17.08■□□□□ 0.32
TRIM3-212ENST00000533064 CIAPIN1Q6FI81 312 aa17.08■□□□□ 0.32
TRIM3-212ENST00000533064 AIDAQ96BJ3 306 aa17.08■□□□□ 0.32
TRIM3-212ENST00000533064 NOL10Q9BSC4 688 aaKnown RBP17.08■□□□□ 0.32
TRIM3-212ENST00000533064 CCDC171Q6TFL3 1326 aa17.07■□□□□ 0.32
TRIM3-212ENST00000533064 PSMD14O00487 310 aa17.07■□□□□ 0.32
TRIM3-212ENST00000533064 SLFNL1Q499Z3 407 aa17.07■□□□□ 0.32
TRIM3-212ENST00000533064 OSBP2Q969R2 916 aa17.07■□□□□ 0.32
TRIM3-212ENST00000533064 SEC62Q99442 399 aaKnown RBP17.07■□□□□ 0.32
TRIM3-212ENST00000533064 ANO2Q9NQ90 1003 aa17.07■□□□□ 0.32
TRIM3-212ENST00000533064 TTF2Q9UNY4 1162 aaKnown RBP17.07■□□□□ 0.32
TRIM3-212ENST00000533064 ADAMTSL1Q8N6G6 1762 aa17.07■□□□□ 0.32
TRIM3-212ENST00000533064 MYH1P12882 1939 aa17.07■□□□□ 0.32
TRIM3-212ENST00000533064 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
TRIM3-212ENST00000533064 VIL1P09327 827 aaKnown RBP17.07■□□□□ 0.32
TRIM3-212ENST00000533064 RSBN1LQ6PCB5 846 aaPredicted RBP17.07■□□□□ 0.32
TRIM3-212ENST00000533064 CERS5Q8N5B7 392 aa17.07■□□□□ 0.32
TRIM3-212ENST00000533064 MXD3Q9BW11 206 aa17.07■□□□□ 0.32
TRIM3-212ENST00000533064 PUS7LQ9H0K6 701 aaKnown RBP17.07■□□□□ 0.32
TRIM3-212ENST00000533064 PRELPP51888 382 aa17.06■□□□□ 0.32
TRIM3-212ENST00000533064 CXCL9Q07325 125 aa17.06■□□□□ 0.32
TRIM3-212ENST00000533064 GRIK5Q16478 980 aa17.06■□□□□ 0.32
TRIM3-212ENST00000533064 RNF181Q9P0P0 153 aa17.06■□□□□ 0.32
TRIM3-212ENST00000533064 MAGEB6P1A0A0J9YX57 407 aa17.05■□□□□ 0.32
TRIM3-212ENST00000533064 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
TRIM3-212ENST00000533064 M0R2C6 588 aa17.05■□□□□ 0.32
TRIM3-212ENST00000533064 FZD9O00144 591 aa17.05■□□□□ 0.32
TRIM3-212ENST00000533064 GPAA1O43292 621 aa17.05■□□□□ 0.32
TRIM3-212ENST00000533064 ZNF589Q86UQ0 364 aaPredicted RBP17.05■□□□□ 0.32
TRIM3-212ENST00000533064 KIAA0825Q8IV33 1275 aa17.05■□□□□ 0.32
TRIM3-212ENST00000533064 AGBL3Q8NEM8 1001 aa17.05■□□□□ 0.32
TRIM3-212ENST00000533064 IL25Q9H293 177 aa17.05■□□□□ 0.32
TRIM3-212ENST00000533064 NAV1Q8NEY1 1877 aa17.05■□□□□ 0.32
TRIM3-212ENST00000533064 MROH7-TTC4A0A0A0MT08 1334 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 BAG3O95817 575 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 DIXDC1Q155Q3 683 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 CERS3Q8IU89 383 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 MIGA1Q8NAN2 632 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 ZNF384Q8TF68 577 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 TEKT1Q969V4 418 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
TRIM3-212ENST00000533064 HDAC9Q9UKV0 1011 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 LAMA4Q16363 1823 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 EPB41L2O43491 1005 aaKnown RBP17.04■□□□□ 0.32
TRIM3-212ENST00000533064 MBD4O95243 580 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 GNAT2P19087 354 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 OGFOD1Q8N543 542 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 TBC1D32Q96NH3 1257 aa17.04■□□□□ 0.32
TRIM3-212ENST00000533064 SCNN1DP51172 638 aa17.03■□□□□ 0.32
TRIM3-212ENST00000533064 HDLBPQ00341 1268 aaKnown RBP17.03■□□□□ 0.32
TRIM3-212ENST00000533064 C9orf131Q5VYM1 1079 aa17.03■□□□□ 0.32
TRIM3-212ENST00000533064 HHIPL2Q6UWX4 724 aa17.03■□□□□ 0.32
TRIM3-212ENST00000533064 ADGRA1Q86SQ6 560 aa17.03■□□□□ 0.32
TRIM3-212ENST00000533064 FAM163AQ96GL9 167 aaPredicted RBP17.03■□□□□ 0.32
TRIM3-212ENST00000533064 DDRGK1Q96HY6 314 aa17.03■□□□□ 0.32
TRIM3-212ENST00000533064 MRIQ9BWK5 157 aa17.03■□□□□ 0.32
TRIM3-212ENST00000533064 AATFQ9NY61 560 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRIM3-212ENST00000533064 PLCG2P16885 1265 aa17.02■□□□□ 0.32
TRIM3-212ENST00000533064 MCCP23508 829 aa17.02■□□□□ 0.32
TRIM3-212ENST00000533064 RPS12P25398 132 aaKnown RBP17.02■□□□□ 0.32
TRIM3-212ENST00000533064 MMP14P50281 582 aa17.02■□□□□ 0.32
TRIM3-212ENST00000533064 RBM5P52756 815 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRIM3-212ENST00000533064 ARMT1Q9H993 441 aa17.02■□□□□ 0.32
TRIM3-212ENST00000533064 GJA3Q9Y6H8 435 aa17.02■□□□□ 0.32
TRIM3-212ENST00000533064 MYH8P13535 1937 aa17.02■□□□□ 0.31
TRIM3-212ENST00000533064 LAMB1P07942 1786 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms