RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 HUNKP57058 714 aa18.98■□□□□ 0.63
CPSF1-210ENST00000532935 HDLBPQ00341 1268 aaKnown RBP18.98■□□□□ 0.63
CPSF1-210ENST00000532935 C20orf194Q5TEA3 1177 aa18.98■□□□□ 0.63
CPSF1-210ENST00000532935 PRAMEF18Q5VWM3 479 aa18.98■□□□□ 0.63
CPSF1-210ENST00000532935 NOP58Q9Y2X3 529 aaKnown RBP18.98■□□□□ 0.63
CPSF1-210ENST00000532935 MYH2Q9UKX2 1941 aa18.98■□□□□ 0.63
CPSF1-210ENST00000532935 MAST3O60307 1309 aa18.98■□□□□ 0.63
CPSF1-210ENST00000532935 GRM1Q13255 1194 aa18.97■□□□□ 0.63
CPSF1-210ENST00000532935 CHMP4BQ9H444 224 aaKnown RBP18.97■□□□□ 0.63
CPSF1-210ENST00000532935 ZBTB40Q9NUA8 1239 aa18.97■□□□□ 0.63
CPSF1-210ENST00000532935 HSPA1AP0DMV8 641 aaKnown RBP18.96■□□□□ 0.63
CPSF1-210ENST00000532935 HSPA1BP0DMV9 641 aaKnown RBP18.96■□□□□ 0.63
CPSF1-210ENST00000532935 TEKT1Q969V4 418 aa18.96■□□□□ 0.63
CPSF1-210ENST00000532935 MRIQ9BWK5 157 aa18.96■□□□□ 0.63
CPSF1-210ENST00000532935 DEFB129Q9H1M3 183 aa18.96■□□□□ 0.63
CPSF1-210ENST00000532935 VEZTQ9HBM0 779 aa18.96■□□□□ 0.63
CPSF1-210ENST00000532935 SALL1Q9NSC2 1324 aa18.96■□□□□ 0.63
CPSF1-210ENST00000532935 NF2P35240 595 aa18.95■□□□□ 0.62
CPSF1-210ENST00000532935 FKBP1BP68106 108 aa18.95■□□□□ 0.62
CPSF1-210ENST00000532935 RASGRF1Q13972 1273 aa18.95■□□□□ 0.62
CPSF1-210ENST00000532935 SPDYE2Q495Y8 402 aa18.95■□□□□ 0.62
CPSF1-210ENST00000532935 GORABQ5T7V8 394 aa18.95■□□□□ 0.62
CPSF1-210ENST00000532935 TDRD3Q9H7E2 651 aaKnown RBP18.95■□□□□ 0.62
CPSF1-210ENST00000532935 GPR108Q9NPR9 543 aa18.95■□□□□ 0.62
CPSF1-210ENST00000532935 ZNF70Q9UC06 446 aaPredicted RBP18.95■□□□□ 0.62
CPSF1-210ENST00000532935 PDS5AQ29RF7 1337 aaKnown RBP18.95■□□□□ 0.62
CPSF1-210ENST00000532935 AKAP11Q9UKA4 1901 aa18.94■□□□□ 0.62
CPSF1-210ENST00000532935 TNNI3KQ59H18 835 aa18.94■□□□□ 0.62
CPSF1-210ENST00000532935 RPAP2Q8IXW5 612 aaPredicted RBP18.94■□□□□ 0.62
CPSF1-210ENST00000532935 ZDHHC15Q96MV8 337 aa18.94■□□□□ 0.62
CPSF1-210ENST00000532935 PPP2R3BQ9Y5P8 575 aa18.94■□□□□ 0.62
CPSF1-210ENST00000532935 FPGT-TNNI3KV9GXZ4 949 aa18.94■□□□□ 0.62
CPSF1-210ENST00000532935 AOC2O75106 756 aa18.93■□□□□ 0.62
CPSF1-210ENST00000532935 LDHBP07195 334 aaKnown RBP18.93■□□□□ 0.62
CPSF1-210ENST00000532935 PRDX5P30044 214 aa18.93■□□□□ 0.62
CPSF1-210ENST00000532935 RGMBQ6NW40 437 aa18.93■□□□□ 0.62
CPSF1-210ENST00000532935 HHIPL2Q6UWX4 724 aa18.93■□□□□ 0.62
CPSF1-210ENST00000532935 EXOC6BQ9Y2D4 811 aa18.93■□□□□ 0.62
CPSF1-210ENST00000532935 MOB2Q70IA6 237 aa18.92■□□□□ 0.62
CPSF1-210ENST00000532935 ZGPATQ8N5A5 531 aaKnown RBP18.92■□□□□ 0.62
CPSF1-210ENST00000532935 MYO5AQ9Y4I1 1855 aaKnown RBP18.91■□□□□ 0.62
CPSF1-210ENST00000532935 SSC5DA1L4H1 1573 aa18.91■□□□□ 0.62
CPSF1-210ENST00000532935 HMMRO75330 724 aa18.91■□□□□ 0.62
CPSF1-210ENST00000532935 ARID4AP29374 1257 aaPredicted RBP18.91■□□□□ 0.62
CPSF1-210ENST00000532935 MAP2K2P36507 400 aa18.91■□□□□ 0.62
CPSF1-210ENST00000532935 ZNF157P51786 506 aaPredicted RBP18.91■□□□□ 0.62
CPSF1-210ENST00000532935 TNFAIP1Q13829 316 aa18.91■□□□□ 0.62
CPSF1-210ENST00000532935 TTLL12Q14166 644 aaPredicted RBP18.91■□□□□ 0.62
CPSF1-210ENST00000532935 RASA3Q14644 834 aa18.91■□□□□ 0.62
CPSF1-210ENST00000532935 APOBEC3HQ6NTF7 200 aaKnown RBP18.91■□□□□ 0.62
CPSF1-210ENST00000532935 SIRT2Q8IXJ6 389 aa18.91■□□□□ 0.62
CPSF1-210ENST00000532935 DBNDD2Q9BQY9 259 aa18.91■□□□□ 0.62
CPSF1-210ENST00000532935 WBP1LQ9NX94 342 aa18.91■□□□□ 0.62
CPSF1-210ENST00000532935 UBE2Q2LH0YL09 131 aa18.9■□□□□ 0.62
CPSF1-210ENST00000532935 UQCRFS1P1P0C7P4 283 aa18.9■□□□□ 0.62
CPSF1-210ENST00000532935 MAP2K1Q02750 393 aaPredicted RBP18.9■□□□□ 0.62
CPSF1-210ENST00000532935 DIXDC1Q155Q3 683 aa18.9■□□□□ 0.62
CPSF1-210ENST00000532935 ERC1Q8IUD2 1116 aa18.9■□□□□ 0.62
CPSF1-210ENST00000532935 SPATA5Q8NB90 893 aa18.9■□□□□ 0.62
CPSF1-210ENST00000532935 CCDC102AQ96A19 550 aa18.9■□□□□ 0.62
CPSF1-210ENST00000532935 HMG20BQ9P0W2 317 aa18.9■□□□□ 0.62
CPSF1-210ENST00000532935 ABCF2Q9UG63 623 aa18.9■□□□□ 0.62
CPSF1-210ENST00000532935 AK9Q5TCS8 1911 aa18.9■□□□□ 0.62
CPSF1-210ENST00000532935 FAM155AB1AL88 458 aaPredicted RBP18.89■□□□□ 0.61
CPSF1-210ENST00000532935 TCP10L2B9ZVM9 353 aa18.89■□□□□ 0.61
CPSF1-210ENST00000532935 NOGQ13253 232 aa18.89■□□□□ 0.61
CPSF1-210ENST00000532935 PRKG1Q13976 671 aa18.89■□□□□ 0.61
CPSF1-210ENST00000532935 SUPT20HL1Q3ZLR7 823 aa18.89■□□□□ 0.61
CPSF1-210ENST00000532935 HSP90AB4PQ58FF6 505 aa18.89■□□□□ 0.61
CPSF1-210ENST00000532935 PI16Q6UXB8 463 aa18.89■□□□□ 0.61
CPSF1-210ENST00000532935 ARMC9Q7Z3E5 817 aa18.89■□□□□ 0.61
CPSF1-210ENST00000532935 AIDAQ96BJ3 306 aa18.89■□□□□ 0.61
CPSF1-210ENST00000532935 DAGLAQ9Y4D2 1042 aa18.89■□□□□ 0.61
CPSF1-210ENST00000532935 OTOFQ9HC10 1997 aa18.88■□□□□ 0.61
CPSF1-210ENST00000532935 MCAMP43121 646 aa18.88■□□□□ 0.61
CPSF1-210ENST00000532935 TNNI2P48788 182 aa18.88■□□□□ 0.61
CPSF1-210ENST00000532935 CACNB3P54284 484 aa18.88■□□□□ 0.61
CPSF1-210ENST00000532935 RRP1P56182 461 aaKnown RBP18.88■□□□□ 0.61
CPSF1-210ENST00000532935 CCDC158Q5M9N0 1113 aa18.88■□□□□ 0.61
CPSF1-210ENST00000532935 TTC39AQ5SRH9 613 aa18.88■□□□□ 0.61
CPSF1-210ENST00000532935 NBPF12Q5TAG4 269 aaPredicted RBP18.88■□□□□ 0.61
CPSF1-210ENST00000532935 SPTY2D1Q68D10 685 aaPredicted RBP18.88■□□□□ 0.61
CPSF1-210ENST00000532935 DZIP1Q86YF9 867 aaKnown RBP18.88■□□□□ 0.61
CPSF1-210ENST00000532935 EAF2Q96CJ1 260 aaPredicted RBP18.88■□□□□ 0.61
CPSF1-210ENST00000532935 CCDC8Q9H0W5 538 aaPredicted RBP18.88■□□□□ 0.61
CPSF1-210ENST00000532935 TMOD2Q9NZR1 351 aa18.88■□□□□ 0.61
CPSF1-210ENST00000532935 FOXN1O15353 648 aa18.87■□□□□ 0.61
CPSF1-210ENST00000532935 SLC10A3P09131 477 aa18.87■□□□□ 0.61
CPSF1-210ENST00000532935 MAST2Q6P0Q8 1798 aa18.87■□□□□ 0.61
CPSF1-210ENST00000532935 RASAL3Q86YV0 1011 aa18.87■□□□□ 0.61
CPSF1-210ENST00000532935 TLR7Q9NYK1 1049 aaKnown RBP18.87■□□□□ 0.61
CPSF1-210ENST00000532935 DBNLQ9UJU6 430 aaKnown RBP18.87■□□□□ 0.61
CPSF1-210ENST00000532935 ANGEL1Q9UNK9 670 aaKnown RBP18.87■□□□□ 0.61
CPSF1-210ENST00000532935 PPP1R12BO60237 982 aaPredicted RBP18.86■□□□□ 0.61
CPSF1-210ENST00000532935 FKBP1CQ5VVH2 108 aa18.86■□□□□ 0.61
CPSF1-210ENST00000532935 ERICH6Q7L0X2 663 aa18.86■□□□□ 0.61
CPSF1-210ENST00000532935 RHPN1Q8TCX5 695 aa18.86■□□□□ 0.61
CPSF1-210ENST00000532935 TEPSINQ96N21 525 aa18.86■□□□□ 0.61
CPSF1-210ENST00000532935 ZIC5Q96T25 663 aa18.86■□□□□ 0.61
CPSF1-210ENST00000532935 TMEM39BQ9GZU3 492 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms