RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 SYCE3A1L190 88 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 MAP9Q49MG5 647 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 TNNI3KQ59H18 835 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 AZI2Q9H6S1 392 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 DCTPP1Q9H773 170 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 FPGT-TNNI3KV9GXZ4 949 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 RFX1P22670 979 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 LMAN1P49257 510 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 SMTNP53814 917 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 PSMD1Q99460 953 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 CGNQ9P2M7 1197 aaKnown RBP12.15□□□□□ -0.46
COLCA1-203ENST00000532918 TFIP11Q9UBB9 837 aaKnown RBP12.15□□□□□ -0.46
COLCA1-203ENST00000532918 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.15□□□□□ -0.46
COLCA1-203ENST00000532918 UGGT1Q9NYU2 1555 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 PHKG2P15735 406 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 CDAN1Q8IWY9 1227 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 MMRN2Q9H8L6 949 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 BICDL2A1A5D9 508 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 TMCO5BA8MYB1 307 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 GCOM1H8Y6P7 765 aaPredicted RBP12.15□□□□□ -0.46
COLCA1-203ENST00000532918 MYZAPP0CAP1 466 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 EHBP1Q8NDI1 1231 aa12.15□□□□□ -0.46
COLCA1-203ENST00000532918 DTHD1Q6ZMT9 781 aa12.15□□□□□ -0.47
COLCA1-203ENST00000532918 IFT74Q96LB3 600 aa12.15□□□□□ -0.47
COLCA1-203ENST00000532918 GPCPD1Q9NPB8 672 aa12.15□□□□□ -0.47
COLCA1-203ENST00000532918 KCNG1Q9UIX4 513 aa12.15□□□□□ -0.47
COLCA1-203ENST00000532918 GOLGA6L9A6NEM1 432 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 NOP2P46087 812 aaKnown RBP12.14□□□□□ -0.47
COLCA1-203ENST00000532918 APPBP2Q92624 585 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 ZBTB21Q9ULJ3 1066 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
COLCA1-203ENST00000532918 SBNO2Q9Y2G9 1366 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 RPL13P26373 211 aaKnown RBP12.14□□□□□ -0.47
COLCA1-203ENST00000532918 SLC1A4P43007 532 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 SLC8A3P57103 927 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 PRKG1Q13976 671 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 PPP2R5BQ15173 497 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 HACE1Q8IYU2 909 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 LGR6Q9HBX8 967 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 N4BP3O15049 544 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 DNM2P50570 870 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 KIF4BQ2VIQ3 1234 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 HAUS3Q68CZ6 603 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 LRRC2Q9BYS8 371 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 KDM5DQ9BY66 1539 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 SHTN1A0MZ66 631 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 CASQ1P31415 396 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 UBE2HP62256 183 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 CHURC1Q8WUH1 139 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
COLCA1-203ENST00000532918 LARP6Q9BRS8 491 aaKnown RBP12.14□□□□□ -0.47
COLCA1-203ENST00000532918 FAM107BQ9H098 131 aa12.14□□□□□ -0.47
COLCA1-203ENST00000532918 STAMBPO95630 424 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 PPP1R2P41236 205 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 SP4Q02446 784 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 BRAPQ7Z569 592 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 UNC5CLQ8IV45 518 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 PTPDC1A2A3K4 754 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 ZSCAN22P10073 491 aaPredicted RBP12.13□□□□□ -0.47
COLCA1-203ENST00000532918 TSPYL6Q8N831 410 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 CPLX3Q8WVH0 158 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.13□□□□□ -0.47
COLCA1-203ENST00000532918 EXOC7Q9UPT5 735 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 SAMD9Q5K651 1589 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 CHL1O00533 1208 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 BMS1Q14692 1282 aaKnown RBP12.13□□□□□ -0.47
COLCA1-203ENST00000532918 SPATA5Q8NB90 893 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 BBXQ8WY36 941 aaPredicted RBP12.13□□□□□ -0.47
COLCA1-203ENST00000532918 MRPS27Q92552 414 aaKnown RBP12.13□□□□□ -0.47
COLCA1-203ENST00000532918 IBTKQ9P2D0 1353 aaPredicted RBP12.13□□□□□ -0.47
COLCA1-203ENST00000532918 CLIP2Q9UDT6 1046 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 MRVI1Q9Y6F6 885 aa12.13□□□□□ -0.47
COLCA1-203ENST00000532918 LOC102724428A0A0B4J2F2 783 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 TRIM37O94972 964 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 SIK1P57059 783 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 CCDC65Q8IXS2 484 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 CCDC102AQ96A19 550 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 ZMYND15Q9H091 742 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 USP40Q9NVE5 1235 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 TTF2Q9UNY4 1162 aaKnown RBP12.12□□□□□ -0.47
COLCA1-203ENST00000532918 AFMP43652 599 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 CRACR2AQ9BSW2 395 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 ESPNB1AK53 854 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 BIN1O00499 593 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 TNNT1P13805 278 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 CTSWP56202 376 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 CREB3L3Q68CJ9 461 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 UBXN4Q92575 508 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 ARMT1Q9H993 441 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 AKR1B10O60218 316 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 GTF2IP78347 998 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 PRDM10Q9NQV6 1147 aa12.12□□□□□ -0.47
COLCA1-203ENST00000532918 AATFQ9NY61 560 aaKnown RBP eCLIP12.12□□□□□ -0.47
COLCA1-203ENST00000532918 GOLGA6L10A0A0M3HER8 536 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 STRN3Q13033 797 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms