RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 CCDC82Q8N4S0 544 aa17.37■□□□□ 0.37
SSH3-210ENST00000532881 MRPS27Q92552 414 aaKnown RBP17.37■□□□□ 0.37
SSH3-210ENST00000532881 WDHD1O75717 1129 aaPredicted RBP17.36■□□□□ 0.37
SSH3-210ENST00000532881 CTDSPL2Q05D32 466 aa17.36■□□□□ 0.37
SSH3-210ENST00000532881 CTNNA3Q9UI47 895 aa17.36■□□□□ 0.37
SSH3-210ENST00000532881 TACC3Q9Y6A5 838 aa17.36■□□□□ 0.37
SSH3-210ENST00000532881 MAP3K15Q6ZN16 1313 aa17.36■□□□□ 0.37
SSH3-210ENST00000532881 MYSM1Q5VVJ2 828 aa17.36■□□□□ 0.37
SSH3-210ENST00000532881 CCDC102BQ68D86 513 aa17.36■□□□□ 0.37
SSH3-210ENST00000532881 CMTR1Q8N1G2 835 aaKnown RBP17.36■□□□□ 0.37
SSH3-210ENST00000532881 ZKSCAN3Q9BRR0 538 aa17.36■□□□□ 0.37
SSH3-210ENST00000532881 TOGARAM1Q9Y4F4 1720 aa17.36■□□□□ 0.37
SSH3-210ENST00000532881 DCCP43146 1447 aa17.36■□□□□ 0.37
SSH3-210ENST00000532881 MYH15Q9Y2K3 1946 aa17.36■□□□□ 0.37
SSH3-210ENST00000532881 ADD2P35612 726 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 CTSWP56202 376 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 LRRC8AQ8IWT6 810 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 RTEL1Q9NZ71 1219 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 TNS2Q63HR2 1409 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 NEDD4P46934 1319 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 WTIPA6NIX2 430 aaPredicted RBP17.35■□□□□ 0.37
SSH3-210ENST00000532881 SMIM22K7EJ46 135 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 SPTLC2O15270 562 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 TNNT1P13805 278 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 TPD52L1Q16890 204 aaPredicted RBP17.35■□□□□ 0.37
SSH3-210ENST00000532881 ADALQ6DHV7 355 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSH3-210ENST00000532881 IQSEC3Q9UPP2 1182 aaPredicted RBP17.35■□□□□ 0.37
SSH3-210ENST00000532881 MROH7-TTC4A0A0A0MT08 1334 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 SOS2Q07890 1332 aaPredicted RBP17.35■□□□□ 0.37
SSH3-210ENST00000532881 UBN2Q6ZU65 1347 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 PRKAB2O43741 272 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 EVCP57679 992 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 SPECC1Q5M775 1068 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 CLIC6Q96NY7 704 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 SEC31BQ9NQW1 1179 aa17.35■□□□□ 0.37
SSH3-210ENST00000532881 SHANK3Q9BYB0 1731 aa17.34■□□□□ 0.37
SSH3-210ENST00000532881 PARP4Q9UKK3 1724 aaKnown RBP17.34■□□□□ 0.37
SSH3-210ENST00000532881 ANKRD18BA2A2Z9 1011 aa17.34■□□□□ 0.37
SSH3-210ENST00000532881 SPDYE4A6NLX3 237 aa17.34■□□□□ 0.37
SSH3-210ENST00000532881 STARD3NLO95772 234 aa17.34■□□□□ 0.37
SSH3-210ENST00000532881 TPM3P06753 285 aa17.34■□□□□ 0.37
SSH3-210ENST00000532881 KIF23Q02241 960 aaPredicted RBP17.34■□□□□ 0.37
SSH3-210ENST00000532881 VGLL2Q8N8G2 317 aa17.34■□□□□ 0.37
SSH3-210ENST00000532881 ZFYP08048 801 aaPredicted RBP17.34■□□□□ 0.37
SSH3-210ENST00000532881 GTF2F1P35269 517 aaKnown RBP eCLIP17.34■□□□□ 0.37
SSH3-210ENST00000532881 ABCC6O95255 1503 aa17.33■□□□□ 0.37
SSH3-210ENST00000532881 ZNF202O95125 648 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 CBX1P83916 185 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 ALG1Q9BT22 464 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 PDE8BO95263 885 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 CYP19A1P11511 503 aaPredicted RBP17.33■□□□□ 0.36
SSH3-210ENST00000532881 PDE6AP16499 860 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 METAP2P50579 478 aaKnown RBP eCLIP17.33■□□□□ 0.36
SSH3-210ENST00000532881 TRIM28Q13263 835 aaKnown RBP17.33■□□□□ 0.36
SSH3-210ENST00000532881 HSP90AA4PQ58FG1 418 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 RRP12Q5JTH9 1297 aaKnown RBP17.33■□□□□ 0.36
SSH3-210ENST00000532881 PPP4R3BQ5MIZ7 849 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 SYNE3Q6ZMZ3 975 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 NBPF11Q86T75 865 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 ARMT1Q9H993 441 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 ANO10Q9NW15 660 aa17.33■□□□□ 0.36
SSH3-210ENST00000532881 CCDC69A6NI79 296 aa17.32■□□□□ 0.36
SSH3-210ENST00000532881 SKILP12757 684 aa17.32■□□□□ 0.36
SSH3-210ENST00000532881 PFKFB1P16118 471 aa17.32■□□□□ 0.36
SSH3-210ENST00000532881 CHAF1AQ13111 956 aaPredicted RBP17.32■□□□□ 0.36
SSH3-210ENST00000532881 KIAA1468Q9P260 1216 aa17.32■□□□□ 0.36
SSH3-210ENST00000532881 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.32■□□□□ 0.36
SSH3-210ENST00000532881 V9GYY5 206 aaPredicted RBP17.32■□□□□ 0.36
SSH3-210ENST00000532881 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
SSH3-210ENST00000532881 CTAGE5O15320 804 aa17.32■□□□□ 0.36
SSH3-210ENST00000532881 RANBP6O60518 1105 aaKnown RBP17.32■□□□□ 0.36
SSH3-210ENST00000532881 TRDNQ13061 729 aa17.32■□□□□ 0.36
SSH3-210ENST00000532881 AXDND1Q5T1B0 1012 aaPredicted RBP17.32■□□□□ 0.36
SSH3-210ENST00000532881 ANO1Q5XXA6 986 aa17.32■□□□□ 0.36
SSH3-210ENST00000532881 NFXL1Q6ZNB6 911 aa17.32■□□□□ 0.36
SSH3-210ENST00000532881 MAGEB6Q8N7X4 407 aa17.32■□□□□ 0.36
SSH3-210ENST00000532881 EPB41L4AQ9HCS5 686 aaPredicted RBP17.32■□□□□ 0.36
SSH3-210ENST00000532881 GUCY1A2P33402 732 aa17.31■□□□□ 0.36
SSH3-210ENST00000532881 KRT40Q6A162 431 aa17.31■□□□□ 0.36
SSH3-210ENST00000532881 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.31■□□□□ 0.36
SSH3-210ENST00000532881 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
SSH3-210ENST00000532881 CEP57L1Q8IYX8 460 aa17.31■□□□□ 0.36
SSH3-210ENST00000532881 PLA2G12BQ9BX93 195 aa17.31■□□□□ 0.36
SSH3-210ENST00000532881 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSH3-210ENST00000532881 TOMM22Q9NS69 142 aa17.31■□□□□ 0.36
SSH3-210ENST00000532881 ANGEL1Q9UNK9 670 aaKnown RBP17.31■□□□□ 0.36
SSH3-210ENST00000532881 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
SSH3-210ENST00000532881 APOA5Q6Q788 366 aa17.31■□□□□ 0.36
SSH3-210ENST00000532881 DZIP3Q86Y13 1208 aaKnown RBP17.31■□□□□ 0.36
SSH3-210ENST00000532881 MIGA1Q8NAN2 632 aa17.31■□□□□ 0.36
SSH3-210ENST00000532881 SMC2O95347 1197 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 ATP1A3P13637 1013 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 LMOD1P29536 600 aaPredicted RBP17.3■□□□□ 0.36
SSH3-210ENST00000532881 AIDAQ96BJ3 306 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 XPO4Q9C0E2 1151 aaKnown RBP17.3■□□□□ 0.36
SSH3-210ENST00000532881 IFNKQ9P0W0 207 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 ZSWIM5Q9P217 1185 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 PAPPAQ13219 1627 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 SH2B2O14492 632 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 422.3 ms