RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 RNF186Q9NXI6 227 aa22.22■■□□□ 1.15
SMG1-203ENST00000532700 SERPINA10Q9UK55 444 aa22.22■■□□□ 1.15
SMG1-203ENST00000532700 PNMA6EA0A0J9YXQ4 647 aa22.21■■□□□ 1.15
SMG1-203ENST00000532700 RLBP1P12271 317 aa22.21■■□□□ 1.15
SMG1-203ENST00000532700 SLC5A1P13866 664 aa22.21■■□□□ 1.15
SMG1-203ENST00000532700 RASA3Q14644 834 aa22.21■■□□□ 1.15
SMG1-203ENST00000532700 LDLRAD1Q5T700 205 aa22.21■■□□□ 1.15
SMG1-203ENST00000532700 ANGEL1Q9UNK9 670 aaKnown RBP22.21■■□□□ 1.15
SMG1-203ENST00000532700 TRPA1O75762 1119 aa22.2■■□□□ 1.14
SMG1-203ENST00000532700 PHKA1P46020 1223 aa22.2■■□□□ 1.14
SMG1-203ENST00000532700 MTX1Q13505 466 aa22.2■■□□□ 1.14
SMG1-203ENST00000532700 TEPSINQ96N21 525 aa22.2■■□□□ 1.14
SMG1-203ENST00000532700 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.2■■□□□ 1.14
SMG1-203ENST00000532700 SRGAP3O43295 1099 aa22.19■■□□□ 1.14
SMG1-203ENST00000532700 FRAT2O75474 233 aaPredicted RBP22.19■■□□□ 1.14
SMG1-203ENST00000532700 ZBED9Q6R2W3 1325 aa22.19■■□□□ 1.14
SMG1-203ENST00000532700 TCP10L2B9ZVM9 353 aa22.18■■□□□ 1.14
SMG1-203ENST00000532700 CA12O43570 354 aa22.18■■□□□ 1.14
SMG1-203ENST00000532700 GNAI3P08754 354 aa22.18■■□□□ 1.14
SMG1-203ENST00000532700 NF2P35240 595 aa22.18■■□□□ 1.14
SMG1-203ENST00000532700 IL15P40933 162 aaPredicted RBP22.18■■□□□ 1.14
SMG1-203ENST00000532700 TMEM39BQ9GZU3 492 aa22.18■■□□□ 1.14
SMG1-203ENST00000532700 CEP126Q9P2H0 1117 aa22.18■■□□□ 1.14
SMG1-203ENST00000532700 FBXO3Q9UK99 471 aa22.18■■□□□ 1.14
SMG1-203ENST00000532700 IPO8O15397 1037 aaKnown RBP22.17■■□□□ 1.14
SMG1-203ENST00000532700 MYO1BO43795 1136 aa22.17■■□□□ 1.14
SMG1-203ENST00000532700 TFCP2Q12800 502 aa22.17■■□□□ 1.14
SMG1-203ENST00000532700 ZKSCAN2Q63HK3 967 aa22.17■■□□□ 1.14
SMG1-203ENST00000532700 APOBEC3HQ6NTF7 200 aaKnown RBP22.17■■□□□ 1.14
SMG1-203ENST00000532700 C1orf115Q9H7X2 142 aa22.17■■□□□ 1.14
SMG1-203ENST00000532700 PPP2R3BQ9Y5P8 575 aa22.17■■□□□ 1.14
SMG1-203ENST00000532700 USP2O75604 605 aaPredicted RBP22.16■■□□□ 1.14
SMG1-203ENST00000532700 PRDX5P30044 214 aa22.16■■□□□ 1.14
SMG1-203ENST00000532700 GJA5P36382 358 aa22.16■■□□□ 1.14
SMG1-203ENST00000532700 TIMM10P62072 90 aa22.16■■□□□ 1.14
SMG1-203ENST00000532700 DIXDC1Q155Q3 683 aa22.16■■□□□ 1.14
SMG1-203ENST00000532700 MAP3K11Q16584 847 aa22.16■■□□□ 1.14
SMG1-203ENST00000532700 ARMC9Q7Z3E5 817 aa22.16■■□□□ 1.14
SMG1-203ENST00000532700 TBC1D22AQ8WUA7 517 aa22.16■■□□□ 1.14
SMG1-203ENST00000532700 ABHD8Q96I13 439 aa22.15■■□□□ 1.14
SMG1-203ENST00000532700 SAGE1Q9NXZ1 904 aa22.15■■□□□ 1.14
SMG1-203ENST00000532700 MYH2Q9UKX2 1941 aa22.14■■□□□ 1.14
SMG1-203ENST00000532700 SPRYD7Q5W111 196 aa22.14■■□□□ 1.13
SMG1-203ENST00000532700 TEKT1Q969V4 418 aa22.14■■□□□ 1.13
SMG1-203ENST00000532700 ZDHHC15Q96MV8 337 aa22.14■■□□□ 1.13
SMG1-203ENST00000532700 R3HDMLQ9H3Y0 253 aa22.14■■□□□ 1.13
SMG1-203ENST00000532700 GNAI2P04899 355 aa22.13■■□□□ 1.13
SMG1-203ENST00000532700 HDLBPQ00341 1268 aaKnown RBP22.13■■□□□ 1.13
SMG1-203ENST00000532700 CCDC102BQ68D86 513 aa22.13■■□□□ 1.13
SMG1-203ENST00000532700 DAGLAQ9Y4D2 1042 aa22.13■■□□□ 1.13
SMG1-203ENST00000532700 A0A1B0GUL7 405 aa22.12■■□□□ 1.13
SMG1-203ENST00000532700 RASGRF1Q13972 1273 aa22.12■■□□□ 1.13
SMG1-203ENST00000532700 MCOLN1Q9GZU1 580 aa22.12■■□□□ 1.13
SMG1-203ENST00000532700 TBC1D8O95759 1140 aa22.11■■□□□ 1.13
SMG1-203ENST00000532700 PI16Q6UXB8 463 aa22.11■■□□□ 1.13
SMG1-203ENST00000532700 WDR66Q8TBY9 1149 aa22.11■■□□□ 1.13
SMG1-203ENST00000532700 CNKSR2Q8WXI2 1034 aa22.11■■□□□ 1.13
SMG1-203ENST00000532700 XAGE2Q96GT9 111 aa22.11■■□□□ 1.13
SMG1-203ENST00000532700 WNK4Q96J92 1243 aa22.11■■□□□ 1.13
SMG1-203ENST00000532700 TM4SF4P48230 202 aa22.1■■□□□ 1.13
SMG1-203ENST00000532700 POLA2Q14181 598 aa22.1■■□□□ 1.13
SMG1-203ENST00000532700 SUPT20HL1Q3ZLR7 823 aa22.1■■□□□ 1.13
SMG1-203ENST00000532700 HHIPL2Q6UWX4 724 aa22.1■■□□□ 1.13
SMG1-203ENST00000532700 HDAC5Q9UQL6 1122 aa22.1■■□□□ 1.13
SMG1-203ENST00000532700 MYO5AQ9Y4I1 1855 aaKnown RBP22.09■■□□□ 1.13
SMG1-203ENST00000532700 PPP1R12BO60237 982 aaPredicted RBP22.09■■□□□ 1.13
SMG1-203ENST00000532700 TNFAIP1Q13829 316 aa22.09■■□□□ 1.13
SMG1-203ENST00000532700 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.09■■□□□ 1.13
SMG1-203ENST00000532700 PANK1Q8TE04 598 aa22.09■■□□□ 1.13
SMG1-203ENST00000532700 ZNF384Q8TF68 577 aa22.09■■□□□ 1.13
SMG1-203ENST00000532700 SLC10A4Q96EP9 437 aa22.09■■□□□ 1.13
SMG1-203ENST00000532700 MRIQ9BWK5 157 aa22.09■■□□□ 1.13
SMG1-203ENST00000532700 SUGT1Q9Y2Z0 365 aa22.09■■□□□ 1.13
SMG1-203ENST00000532700 SALL1Q9NSC2 1324 aa22.08■■□□□ 1.13
SMG1-203ENST00000532700 NFIAQ12857 509 aa22.08■■□□□ 1.13
SMG1-203ENST00000532700 DGKZQ13574 1117 aa22.08■■□□□ 1.13
SMG1-203ENST00000532700 ITPRIPQ8IWB1 547 aa22.08■■□□□ 1.13
SMG1-203ENST00000532700 ELP3Q9H9T3 547 aa22.08■■□□□ 1.13
SMG1-203ENST00000532700 MAST3O60307 1309 aa22.07■■□□□ 1.12
SMG1-203ENST00000532700 IGF2BP3O00425 579 aaKnown RBP eCLIP22.07■■□□□ 1.12
SMG1-203ENST00000532700 ZBTB7BO15156 539 aaPredicted RBP22.07■■□□□ 1.12
SMG1-203ENST00000532700 CDC42EP5Q6NZY7 148 aa22.07■■□□□ 1.12
SMG1-203ENST00000532700 DENND2AQ9ULE3 1009 aa22.07■■□□□ 1.12
SMG1-203ENST00000532700 DOCK2Q92608 1830 aa22.07■■□□□ 1.12
SMG1-203ENST00000532700 IREB2P48200 963 aaKnown RBP22.06■■□□□ 1.12
SMG1-203ENST00000532700 ZFPM1Q8IX07 1006 aa22.06■■□□□ 1.12
SMG1-203ENST00000532700 SSH3Q8TE77 659 aa22.06■■□□□ 1.12
SMG1-203ENST00000532700 RFX7Q2KHR2 1363 aa22.05■■□□□ 1.12
SMG1-203ENST00000532700 LDHBP07195 334 aaKnown RBP22.05■■□□□ 1.12
SMG1-203ENST00000532700 VGLL4Q14135 290 aa22.05■■□□□ 1.12
SMG1-203ENST00000532700 FTSJ3Q8IY81 847 aaKnown RBP22.05■■□□□ 1.12
SMG1-203ENST00000532700 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.05■■□□□ 1.12
SMG1-203ENST00000532700 NEUROD6Q96NK8 337 aa22.05■■□□□ 1.12
SMG1-203ENST00000532700 GNL3LQ9NVN8 582 aaKnown RBP22.05■■□□□ 1.12
SMG1-203ENST00000532700 FAM198AQ9UFP1 575 aa22.05■■□□□ 1.12
SMG1-203ENST00000532700 SEMA3EO15041 775 aa22.04■■□□□ 1.12
SMG1-203ENST00000532700 SLURP2P0DP57 97 aa22.04■■□□□ 1.12
SMG1-203ENST00000532700 TNNI2P48788 182 aa22.04■■□□□ 1.12
SMG1-203ENST00000532700 ATP8B2P98198 1209 aa22.04■■□□□ 1.12
SMG1-203ENST00000532700 TCP10Q12799 353 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms