RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ZNF609O15014 1411 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 XBP1P17861 261 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 MYL5Q02045 173 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 KARSQ15046 597 aaKnown RBP13.05□□□□□ -0.32
NXF1-211ENST00000531709 KRT40Q6A162 431 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 STX17P56962 302 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 NLRP12P59046 1061 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 APPBP2Q92624 585 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 STARD3NLO95772 234 aa13.04□□□□□ -0.32
NXF1-211ENST00000531709 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
NXF1-211ENST00000531709 TSR1Q2NL82 804 aaKnown RBP13.04□□□□□ -0.32
NXF1-211ENST00000531709 TSGA10IPQ3SY00 556 aa13.04□□□□□ -0.32
NXF1-211ENST00000531709 CMTR1Q8N1G2 835 aaKnown RBP13.04□□□□□ -0.32
NXF1-211ENST00000531709 PCMTD1Q96MG8 357 aaPredicted RBP13.04□□□□□ -0.32
NXF1-211ENST00000531709 PUS7LQ9H0K6 701 aaKnown RBP13.04□□□□□ -0.32
NXF1-211ENST00000531709 RTEL1Q9NZ71 1219 aa13.04□□□□□ -0.32
NXF1-211ENST00000531709 ANGEL1Q9UNK9 670 aaKnown RBP13.04□□□□□ -0.32
NXF1-211ENST00000531709 GPS2Q13227 327 aa13.04□□□□□ -0.32
NXF1-211ENST00000531709 FILIP1LQ4L180 1135 aa13.04□□□□□ -0.32
NXF1-211ENST00000531709 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
NXF1-211ENST00000531709 SMARCE1Q969G3 411 aa13.04□□□□□ -0.32
NXF1-211ENST00000531709 CTDNEP1O95476 244 aa13.04□□□□□ -0.32
NXF1-211ENST00000531709 CARD6Q9BX69 1037 aa13.04□□□□□ -0.32
NXF1-211ENST00000531709 DACH1Q9UI36 760 aa13.04□□□□□ -0.32
NXF1-211ENST00000531709 TULP1O00294 542 aaPredicted RBP13.03□□□□□ -0.32
NXF1-211ENST00000531709 CYP27B1O15528 508 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 USPL1Q5W0Q7 1092 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 MFSD6Q6ZSS7 791 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
NXF1-211ENST00000531709 ANKRD20A12PQ8NF67 263 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 CCDC12Q8WUD4 166 aaPredicted RBP13.03□□□□□ -0.32
NXF1-211ENST00000531709 IL17RAQ96F46 866 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 YEATS4O95619 227 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 ZSCAN20P17040 1043 aaPredicted RBP13.03□□□□□ -0.32
NXF1-211ENST00000531709 MAP3K12Q12852 859 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 DHX40Q8IX18 779 aaKnown RBP13.03□□□□□ -0.32
NXF1-211ENST00000531709 SMARCC2Q8TAQ2 1214 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 RAI14Q9P0K7 980 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 KCNH3Q9ULD8 1083 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 ZNF827Q17R98 1081 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 C19orf44Q9H6X5 657 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 LZTFL1Q9NQ48 299 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 KCNJ14Q9UNX9 436 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 CDC25BP30305 580 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 MIGA1Q8NAN2 632 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 WASF1Q92558 559 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
NXF1-211ENST00000531709 SH3TC1Q8TE82 1336 aa13.02□□□□□ -0.32
NXF1-211ENST00000531709 IMPACTQ9P2X3 320 aa13.02□□□□□ -0.32
NXF1-211ENST00000531709 AGLP35573 1532 aa13.02□□□□□ -0.33
NXF1-211ENST00000531709 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.33
NXF1-211ENST00000531709 KIF20AO95235 890 aa13.02□□□□□ -0.33
NXF1-211ENST00000531709 CTDSPL2Q05D32 466 aa13.02□□□□□ -0.33
NXF1-211ENST00000531709 PPP1R13BQ96KQ4 1090 aa13.02□□□□□ -0.33
NXF1-211ENST00000531709 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.33
NXF1-211ENST00000531709 ITGA6P23229 1130 aa13.02□□□□□ -0.33
NXF1-211ENST00000531709 ADKP55263 362 aaKnown RBP13.02□□□□□ -0.33
NXF1-211ENST00000531709 KIF4BQ2VIQ3 1234 aa13.02□□□□□ -0.33
NXF1-211ENST00000531709 FBXO38Q6PIJ6 1188 aa13.02□□□□□ -0.33
NXF1-211ENST00000531709 FMR1NBQ8N0W7 255 aaPredicted RBP13.02□□□□□ -0.33
NXF1-211ENST00000531709 MAGEB6Q8N7X4 407 aa13.02□□□□□ -0.33
NXF1-211ENST00000531709 DHX58Q96C10 678 aa13.02□□□□□ -0.33
NXF1-211ENST00000531709 ALDH8A1Q9H2A2 487 aaPredicted RBP13.02□□□□□ -0.33
NXF1-211ENST00000531709 BRMS1Q9HCU9 246 aa13.02□□□□□ -0.33
NXF1-211ENST00000531709 SARM1Q6SZW1 724 aa13.01□□□□□ -0.33
NXF1-211ENST00000531709 TTF1Q15361 905 aaPredicted RBP13.01□□□□□ -0.33
NXF1-211ENST00000531709 SLC4A8Q2Y0W8 1093 aa13.01□□□□□ -0.33
NXF1-211ENST00000531709 GOLGA6L1Q8N7Z2 621 aa13.01□□□□□ -0.33
NXF1-211ENST00000531709 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
NXF1-211ENST00000531709 RFX5P48382 616 aaPredicted RBP13.01□□□□□ -0.33
NXF1-211ENST00000531709 WTAPQ15007 396 aa13.01□□□□□ -0.33
NXF1-211ENST00000531709 BAG1Q99933 345 aaPredicted RBP13.01□□□□□ -0.33
NXF1-211ENST00000531709 INCENPQ9NQS7 918 aa13.01□□□□□ -0.33
NXF1-211ENST00000531709 ANKARQ7Z5J8 1434 aa13.01□□□□□ -0.33
NXF1-211ENST00000531709 CMA1P23946 247 aa13□□□□□ -0.33
NXF1-211ENST00000531709 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
NXF1-211ENST00000531709 NFE2L3Q9Y4A8 694 aa13□□□□□ -0.33
NXF1-211ENST00000531709 DIP2AQ14689 1571 aa13□□□□□ -0.33
NXF1-211ENST00000531709 DIP2BQ9P265 1576 aa13□□□□□ -0.33
NXF1-211ENST00000531709 ZNF532Q9HCE3 1301 aa13□□□□□ -0.33
NXF1-211ENST00000531709 A0A1W2PQ27 194 aa13□□□□□ -0.33
NXF1-211ENST00000531709 A0A1W2PQ64 194 aa13□□□□□ -0.33
NXF1-211ENST00000531709 A0A1W2PQD8 194 aa13□□□□□ -0.33
NXF1-211ENST00000531709 EVCP57679 992 aa13□□□□□ -0.33
NXF1-211ENST00000531709 RTN1Q16799 776 aa13□□□□□ -0.33
NXF1-211ENST00000531709 KMT5BQ4FZB7 885 aa13□□□□□ -0.33
NXF1-211ENST00000531709 SYNE4Q8N205 404 aa13□□□□□ -0.33
NXF1-211ENST00000531709 ANKRD7Q92527 254 aa13□□□□□ -0.33
NXF1-211ENST00000531709 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
NXF1-211ENST00000531709 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13□□□□□ -0.332e-9■■■□□ 18.9
NXF1-211ENST00000531709 PEAK1Q9H792 1746 aa13□□□□□ -0.33
NXF1-211ENST00000531709 MBD4O95243 580 aa13□□□□□ -0.33
NXF1-211ENST00000531709 EXOSC10Q01780 885 aaKnown RBP13□□□□□ -0.33
NXF1-211ENST00000531709 DIS3L2Q8IYB7 885 aaKnown RBP13□□□□□ -0.33
NXF1-211ENST00000531709 DESI2Q9BSY9 194 aa13□□□□□ -0.33
NXF1-211ENST00000531709 ARMT1Q9H993 441 aa13□□□□□ -0.33
NXF1-211ENST00000531709 CABP5Q9NP86 173 aa13□□□□□ -0.33
NXF1-211ENST00000531709 PCDHA5Q9Y5H7 936 aa13□□□□□ -0.33
NXF1-211ENST00000531709 SLC4A4Q9Y6R1 1079 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms