RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 HSP90AB4PQ58FF6 505 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 SAMD5Q5TGI4 173 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 LRRC69Q6ZNQ3 347 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 PRR12Q9ULL5 1215 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 A0A0U1RQG5 324 aaPredicted RBP8.39□□□□□ -1.07
ATM-216ENST00000531525 ENPP3O14638 875 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 TNP2Q05952 138 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 JDP2Q8WYK2 163 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 NGLY1Q96IV0 654 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 CCDC136Q96JN2 1154 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 HSH2DQ96JZ2 352 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 SRPK1Q96SB4 655 aaKnown RBP8.39□□□□□ -1.07
ATM-216ENST00000531525 GJA3Q9Y6H8 435 aa8.39□□□□□ -1.07
ATM-216ENST00000531525 DCDC2BA2VCK2 349 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 CREB3O43889 395 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 FAM157BP0CG42 384 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 MAPTP10636 758 aaKnown RBP8.38□□□□□ -1.07
ATM-216ENST00000531525 ATF4P18848 351 aaPredicted RBP8.38□□□□□ -1.07
ATM-216ENST00000531525 FGFR3P22607 806 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 GNA15P30679 374 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 EIF1AXP47813 144 aaKnown RBP8.38□□□□□ -1.07
ATM-216ENST00000531525 HNRNPMP52272 730 aaKnown RBP eCLIP8.38□□□□□ -1.07
ATM-216ENST00000531525 RALBP1Q15311 655 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 ALG1LQ6GMV1 187 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 ZNF280CQ8ND82 737 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 WHAMMQ8TF30 809 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 STAG1Q8WVM7 1258 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 CRELD1Q96HD1 420 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 SLKQ9H2G2 1235 aaPredicted RBP8.38□□□□□ -1.07
ATM-216ENST00000531525 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
ATM-216ENST00000531525 TNRQ92752 1358 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 C2CD2LO14523 706 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 EFSO43281 561 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 FZD6O60353 706 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 TOM1O60784 492 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 CTSHP09668 335 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 PIP4K2BP78356 416 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 CTBSQ01459 385 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 GGT6Q6P531 493 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 HS2ST1Q7LGA3 356 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 TEX2Q8IWB9 1127 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 COL26A1Q96A83 441 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 RNPC3Q96LT9 517 aaKnown RBP8.37□□□□□ -1.07
ATM-216ENST00000531525 QTRT2Q9H974 415 aaKnown RBP8.37□□□□□ -1.07
ATM-216ENST00000531525 SRA1Q9HD15 236 aaKnown RBP8.37□□□□□ -1.07
ATM-216ENST00000531525 MED14O60244 1454 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 ZC3H13Q5T200 1668 aaKnown RBP8.37□□□□□ -1.07
ATM-216ENST00000531525 EHBP1L1Q8N3D4 1523 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 CCNB3Q8WWL7 1395 aa8.37□□□□□ -1.07
ATM-216ENST00000531525 RTEL1-TNFRSF6BF6WH68 1400 aa8.36□□□□□ -1.07
ATM-216ENST00000531525 NLRP1Q9C000 1473 aa8.36□□□□□ -1.07
ATM-216ENST00000531525 MBD5Q9P267 1494 aa8.36□□□□□ -1.07
ATM-216ENST00000531525 KHNYNO15037 678 aaKnown RBP8.36□□□□□ -1.07
ATM-216ENST00000531525 EIF3JO75822 258 aaKnown RBP8.36□□□□□ -1.07
ATM-216ENST00000531525 CHMP4BP1P59074 171 aa8.36□□□□□ -1.07
ATM-216ENST00000531525 ENOX2Q16206 610 aaKnown RBP8.36□□□□□ -1.07
ATM-216ENST00000531525 RTN1Q16799 776 aa8.36□□□□□ -1.07
ATM-216ENST00000531525 ZNF385CQ66K41 422 aaPredicted RBP8.36□□□□□ -1.07
ATM-216ENST00000531525 SAP130Q9H0E3 1048 aa8.36□□□□□ -1.07
ATM-216ENST00000531525 UGGT1Q9NYU2 1555 aa8.36□□□□□ -1.07
ATM-216ENST00000531525 SSBP05455 408 aaKnown RBP eCLIP8.35□□□□□ -1.07
ATM-216ENST00000531525 MZF1P28698 734 aaPredicted RBP8.35□□□□□ -1.07
ATM-216ENST00000531525 PAK2Q13177 524 aa8.35□□□□□ -1.07
ATM-216ENST00000531525 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
ATM-216ENST00000531525 FAM129BQ96TA1 746 aa8.35□□□□□ -1.07
ATM-216ENST00000531525 STRN4Q9NRL3 753 aa8.35□□□□□ -1.07
ATM-216ENST00000531525 CFDP1Q9UEE9 299 aaPredicted RBP8.35□□□□□ -1.07
ATM-216ENST00000531525 NPHP4O75161 1426 aaPredicted RBP8.35□□□□□ -1.07
ATM-216ENST00000531525 XIRP1Q702N8 1843 aaKnown RBP8.35□□□□□ -1.07
ATM-216ENST00000531525 AMPD3Q01432 767 aa8.34□□□□□ -1.07
ATM-216ENST00000531525 SPTY2D1Q68D10 685 aaPredicted RBP8.34□□□□□ -1.07
ATM-216ENST00000531525 LYPD4Q6UWN0 246 aa8.34□□□□□ -1.07
ATM-216ENST00000531525 PRPF38AQ8NAV1 312 aaKnown RBP8.34□□□□□ -1.07
ATM-216ENST00000531525 ANKIB1Q9P2G1 1089 aa8.34□□□□□ -1.07
ATM-216ENST00000531525 BCS1LQ9Y276 419 aa8.34□□□□□ -1.07
ATM-216ENST00000531525 AK5Q9Y6K8 562 aa8.34□□□□□ -1.07
ATM-216ENST00000531525 CCDC141Q6ZP82 1450 aa8.34□□□□□ -1.07
ATM-216ENST00000531525 IGHA2P01877 340 aa8.34□□□□□ -1.08
ATM-216ENST00000531525 PDGFRBP09619 1106 aa8.34□□□□□ -1.08
ATM-216ENST00000531525 CD33P20138 364 aa8.34□□□□□ -1.08
ATM-216ENST00000531525 TBX4P57082 545 aa8.34□□□□□ -1.08
ATM-216ENST00000531525 BIRC2Q13490 618 aa8.34□□□□□ -1.08
ATM-216ENST00000531525 FAM50AQ14320 339 aaKnown RBP8.34□□□□□ -1.08
ATM-216ENST00000531525 FAM182BQ5T319 152 aa8.34□□□□□ -1.08
ATM-216ENST00000531525 ACDQ96AP0 544 aa8.34□□□□□ -1.08
ATM-216ENST00000531525 EVI5LQ96CN4 794 aa8.34□□□□□ -1.08
ATM-216ENST00000531525 MYO19Q96H55 970 aa8.34□□□□□ -1.08
ATM-216ENST00000531525 STK17AQ9UEE5 414 aa8.34□□□□□ -1.08
ATM-216ENST00000531525 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.08
ATM-216ENST00000531525 DHX29Q7Z478 1369 aaKnown RBP8.33□□□□□ -1.08
ATM-216ENST00000531525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.33□□□□□ -1.08
ATM-216ENST00000531525 LRRC7Q96NW7 1537 aa8.33□□□□□ -1.08
ATM-216ENST00000531525 UBR1Q8IWV7 1749 aa8.33□□□□□ -1.08
ATM-216ENST00000531525 HMGB1P1B2RPK0 211 aaPredicted RBP8.33□□□□□ -1.08
ATM-216ENST00000531525 MAP2K3P46734 347 aa8.33□□□□□ -1.08
ATM-216ENST00000531525 RHBDL3P58872 404 aa8.33□□□□□ -1.08
ATM-216ENST00000531525 SERINC3Q13530 473 aa8.33□□□□□ -1.08
ATM-216ENST00000531525 C16orf46Q6P387 395 aa8.33□□□□□ -1.08
ATM-216ENST00000531525 ALKBH8Q96BT7 664 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms