RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 DPF3Q92784 378 aa11.72□□□□□ -0.53
NEDD8-206ENST00000531430 SSC5DA1L4H1 1573 aa11.71□□□□□ -0.53
NEDD8-206ENST00000531430 CRKP46108 304 aa11.71□□□□□ -0.53
NEDD8-206ENST00000531430 CACNB3P54284 484 aa11.71□□□□□ -0.53
NEDD8-206ENST00000531430 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.53
NEDD8-206ENST00000531430 EPHA10Q5JZY3 1008 aa11.71□□□□□ -0.53
NEDD8-206ENST00000531430 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.53
NEDD8-206ENST00000531430 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.71□□□□□ -0.53
NEDD8-206ENST00000531430 WWC1Q8IX03 1113 aa11.71□□□□□ -0.53
NEDD8-206ENST00000531430 FAM43AQ8N2R8 423 aa11.71□□□□□ -0.53
NEDD8-206ENST00000531430 ZNF333Q96JL9 665 aa11.71□□□□□ -0.53
NEDD8-206ENST00000531430 MS4A4AQ96JQ5 239 aa11.71□□□□□ -0.53
NEDD8-206ENST00000531430 H0YGN5 161 aa11.7□□□□□ -0.54
NEDD8-206ENST00000531430 FXR1P51114 621 aaKnown RBP eCLIP11.7□□□□□ -0.54
NEDD8-206ENST00000531430 VGLL4Q14135 290 aa11.7□□□□□ -0.54
NEDD8-206ENST00000531430 BIN2Q9UBW5 565 aaPredicted RBP11.7□□□□□ -0.54
NEDD8-206ENST00000531430 SERPINA10Q9UK55 444 aa11.7□□□□□ -0.54
NEDD8-206ENST00000531430 FAM205AQ6ZU69 1335 aa11.69□□□□□ -0.54
NEDD8-206ENST00000531430 IRS2Q9Y4H2 1338 aa11.69□□□□□ -0.54
NEDD8-206ENST00000531430 VAMP4O75379 141 aa11.69□□□□□ -0.54
NEDD8-206ENST00000531430 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
NEDD8-206ENST00000531430 TDRD7Q8NHU6 1098 aaKnown RBP11.69□□□□□ -0.54
NEDD8-206ENST00000531430 ZKSCAN4Q969J2 545 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-206ENST00000531430 FAM84BQ96KN1 310 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-206ENST00000531430 TEPSINQ96N21 525 aa11.69□□□□□ -0.54
NEDD8-206ENST00000531430 PUS3Q9BZE2 481 aaKnown RBP11.69□□□□□ -0.54
NEDD8-206ENST00000531430 ARHGAP39Q9C0H5 1083 aa11.69□□□□□ -0.54
NEDD8-206ENST00000531430 MKI67P46013 3256 aaKnown RBP11.69□□□□□ -0.54
NEDD8-206ENST00000531430 CENPFP49454 3210 aa11.69□□□□□ -0.54
NEDD8-206ENST00000531430 GRM8O00222 908 aa11.68□□□□□ -0.54
NEDD8-206ENST00000531430 FMNL1O95466 1100 aaPredicted RBP11.68□□□□□ -0.54
NEDD8-206ENST00000531430 CETPP11597 493 aa11.68□□□□□ -0.54
NEDD8-206ENST00000531430 UBE4AQ14139 1066 aa11.68□□□□□ -0.54
NEDD8-206ENST00000531430 GRIK5Q16478 980 aa11.68□□□□□ -0.54
NEDD8-206ENST00000531430 CCDC184Q52MB2 194 aa11.68□□□□□ -0.54
NEDD8-206ENST00000531430 BEND3Q5T5X7 828 aa11.68□□□□□ -0.54
NEDD8-206ENST00000531430 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
NEDD8-206ENST00000531430 MIGA2Q7L4E1 593 aa11.68□□□□□ -0.54
NEDD8-206ENST00000531430 WRNIP1Q96S55 665 aa11.68□□□□□ -0.54
NEDD8-206ENST00000531430 TMOD2Q9NZR1 351 aa11.68□□□□□ -0.54
NEDD8-206ENST00000531430 BTBD19C9JJ37 291 aa11.67□□□□□ -0.54
NEDD8-206ENST00000531430 TLR2O60603 784 aa11.67□□□□□ -0.54
NEDD8-206ENST00000531430 SNAPC2Q13487 334 aa11.67□□□□□ -0.54
NEDD8-206ENST00000531430 CAVIN4Q5BKX8 364 aa11.67□□□□□ -0.54
NEDD8-206ENST00000531430 ERO1BQ86YB8 467 aa11.67□□□□□ -0.54
NEDD8-206ENST00000531430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.543e-11■■□□□ 12.5
NEDD8-206ENST00000531430 CPA4Q9UI42 421 aa11.67□□□□□ -0.54
NEDD8-206ENST00000531430 CEP290O15078 2479 aa11.67□□□□□ -0.54
NEDD8-206ENST00000531430 ZNF646O15015 1829 aaPredicted RBP11.67□□□□□ -0.54
NEDD8-206ENST00000531430 SPDYE5A6NIY4 337 aa11.66□□□□□ -0.54
NEDD8-206ENST00000531430 IRF6O14896 467 aa11.66□□□□□ -0.54
NEDD8-206ENST00000531430 PSMC4P43686 418 aa11.66□□□□□ -0.54
NEDD8-206ENST00000531430 LACTBP83111 547 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-206ENST00000531430 MTFR1Q15390 333 aa11.66□□□□□ -0.54
NEDD8-206ENST00000531430 CCDC27Q2M243 656 aa11.66□□□□□ -0.54
NEDD8-206ENST00000531430 METTL24Q5JXM2 366 aa11.66□□□□□ -0.54
NEDD8-206ENST00000531430 RAET1EQ8TD07 263 aa11.66□□□□□ -0.54
NEDD8-206ENST00000531430 TEKT1Q969V4 418 aa11.66□□□□□ -0.54
NEDD8-206ENST00000531430 FANCIQ9NVI1 1328 aa11.65□□□□□ -0.54
NEDD8-206ENST00000531430 HOXD10P28358 340 aa11.65□□□□□ -0.54
NEDD8-206ENST00000531430 ZEB1P37275 1124 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-206ENST00000531430 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-206ENST00000531430 HOOK2Q96ED9 719 aa11.65□□□□□ -0.54
NEDD8-206ENST00000531430 SUCLG2Q96I99 432 aa11.65□□□□□ -0.54
NEDD8-206ENST00000531430 SRCIN1Q9C0H9 1055 aa11.65□□□□□ -0.54
NEDD8-206ENST00000531430 HTTP42858 3142 aa11.65□□□□□ -0.54
NEDD8-206ENST00000531430 MROH5Q6ZUA9 1318 aa11.64□□□□□ -0.55
NEDD8-206ENST00000531430 BCAMP50895 628 aa11.64□□□□□ -0.55
NEDD8-206ENST00000531430 TCP10Q12799 353 aa11.64□□□□□ -0.55
NEDD8-206ENST00000531430 LRRC24Q50LG9 513 aa11.64□□□□□ -0.55
NEDD8-206ENST00000531430 DCAF15Q66K64 600 aa11.64□□□□□ -0.55
NEDD8-206ENST00000531430 FBXO33Q7Z6M2 555 aa11.64□□□□□ -0.55
NEDD8-206ENST00000531430 TBC1D22AQ8WUA7 517 aa11.64□□□□□ -0.55
NEDD8-206ENST00000531430 ZNF341Q9BYN7 854 aa11.64□□□□□ -0.55
NEDD8-206ENST00000531430 SNCAIPQ9Y6H5 919 aa11.64□□□□□ -0.55
NEDD8-206ENST00000531430 ECM29Q5VYK3 1845 aa11.64□□□□□ -0.55
NEDD8-206ENST00000531430 IL16Q14005 1332 aa11.63□□□□□ -0.55
NEDD8-206ENST00000531430 TRIOBPQ9H2D6 2365 aa11.63□□□□□ -0.55
NEDD8-206ENST00000531430 PDHXO00330 501 aa11.63□□□□□ -0.55
NEDD8-206ENST00000531430 GNRH1P01148 92 aa11.63□□□□□ -0.55
NEDD8-206ENST00000531430 INPP5BP32019 993 aa11.63□□□□□ -0.55
NEDD8-206ENST00000531430 PRMT2P55345 433 aa11.63□□□□□ -0.55
NEDD8-206ENST00000531430 PPIL2Q13356 520 aa11.63□□□□□ -0.55
NEDD8-206ENST00000531430 TRIM47Q96LD4 638 aa11.63□□□□□ -0.55
NEDD8-206ENST00000531430 RNF208Q9H0X6 261 aa11.63□□□□□ -0.55
NEDD8-206ENST00000531430 RIPOR2Q9Y4F9 1068 aa11.63□□□□□ -0.55
NEDD8-206ENST00000531430 ALDH1L1O75891 902 aa11.62□□□□□ -0.55
NEDD8-206ENST00000531430 NBPF7P0C2Y1 421 aaPredicted RBP11.62□□□□□ -0.55
NEDD8-206ENST00000531430 CCL5P13501 91 aa11.62□□□□□ -0.55
NEDD8-206ENST00000531430 OSBPP22059 807 aa11.62□□□□□ -0.55
NEDD8-206ENST00000531430 GRK4P32298 578 aa11.62□□□□□ -0.55
NEDD8-206ENST00000531430 HDLBPQ00341 1268 aaKnown RBP11.62□□□□□ -0.55
NEDD8-206ENST00000531430 C17orf99Q6UX52 265 aa11.62□□□□□ -0.55
NEDD8-206ENST00000531430 WDR63Q8IWG1 891 aa11.62□□□□□ -0.55
NEDD8-206ENST00000531430 HTATIP2Q9BUP3 242 aa11.62□□□□□ -0.55
NEDD8-206ENST00000531430 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
NEDD8-206ENST00000531430 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
NEDD8-206ENST00000531430 SRRDQ9UH36 339 aa11.62□□□□□ -0.55
NEDD8-206ENST00000531430 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
NEDD8-206ENST00000531430 CTGFP29279 349 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms