RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 RABL6Q3YEC7 729 aaPredicted RBP22.4■■□□□ 1.18
PTPN11-204ENST00000531326 SPDYE2Q495Y8 402 aa22.4■■□□□ 1.18
PTPN11-204ENST00000531326 ANKRD44Q8N8A2 993 aa22.4■■□□□ 1.18
PTPN11-204ENST00000531326 API5Q9BZZ5 524 aaKnown RBP22.4■■□□□ 1.18
PTPN11-204ENST00000531326 ZNF70Q9UC06 446 aaPredicted RBP22.4■■□□□ 1.18
PTPN11-204ENST00000531326 SERPINA10Q9UK55 444 aa22.4■■□□□ 1.18
PTPN11-204ENST00000531326 HTTP42858 3142 aa22.4■■□□□ 1.18
PTPN11-204ENST00000531326 UNCXA6NJT0 531 aa22.39■■□□□ 1.17
PTPN11-204ENST00000531326 IGF2BP3O00425 579 aaKnown RBP eCLIP22.39■■□□□ 1.17
PTPN11-204ENST00000531326 ALDH1A1P00352 501 aa22.39■■□□□ 1.17
PTPN11-204ENST00000531326 INHBEP58166 350 aa22.39■■□□□ 1.17
PTPN11-204ENST00000531326 GRIK5Q16478 980 aa22.39■■□□□ 1.17
PTPN11-204ENST00000531326 LRRC24Q50LG9 513 aa22.39■■□□□ 1.17
PTPN11-204ENST00000531326 FBXO46Q6PJ61 603 aaPredicted RBP22.39■■□□□ 1.17
PTPN11-204ENST00000531326 FRAT1Q92837 279 aaPredicted RBP22.39■■□□□ 1.17
PTPN11-204ENST00000531326 TDRD3Q9H7E2 651 aaKnown RBP22.39■■□□□ 1.17
PTPN11-204ENST00000531326 TNNQ9UQP3 1299 aa22.39■■□□□ 1.17
PTPN11-204ENST00000531326 MROH5Q6ZUA9 1318 aa22.38■■□□□ 1.17
PTPN11-204ENST00000531326 IPO8O15397 1037 aaKnown RBP22.38■■□□□ 1.17
PTPN11-204ENST00000531326 TRIM27P14373 513 aa22.38■■□□□ 1.17
PTPN11-204ENST00000531326 FBXO33Q7Z6M2 555 aa22.38■■□□□ 1.17
PTPN11-204ENST00000531326 CDAN1Q8IWY9 1227 aa22.38■■□□□ 1.17
PTPN11-204ENST00000531326 IREB2P48200 963 aaKnown RBP22.37■■□□□ 1.17
PTPN11-204ENST00000531326 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
PTPN11-204ENST00000531326 DZIP1LQ8IYY4 767 aaKnown RBP22.37■■□□□ 1.17
PTPN11-204ENST00000531326 VGLL2Q8N8G2 317 aa22.37■■□□□ 1.17
PTPN11-204ENST00000531326 TEPSINQ96N21 525 aa22.37■■□□□ 1.17
PTPN11-204ENST00000531326 IQSEC3Q9UPP2 1182 aaPredicted RBP22.37■■□□□ 1.17
PTPN11-204ENST00000531326 CRKP46108 304 aa22.36■■□□□ 1.17
PTPN11-204ENST00000531326 TNFAIP1Q13829 316 aa22.36■■□□□ 1.17
PTPN11-204ENST00000531326 ZKSCAN2Q63HK3 967 aa22.36■■□□□ 1.17
PTPN11-204ENST00000531326 ANKRD13AQ8IZ07 590 aa22.36■■□□□ 1.17
PTPN11-204ENST00000531326 KLHDC4Q8TBB5 520 aa22.35■■□□□ 1.17
PTPN11-204ENST00000531326 TCP10L2B9ZVM9 353 aa22.34■■□□□ 1.17
PTPN11-204ENST00000531326 METTL24Q5JXM2 366 aa22.34■■□□□ 1.17
PTPN11-204ENST00000531326 PTPN18Q99952 460 aa22.34■■□□□ 1.17
PTPN11-204ENST00000531326 PDE8BO95263 885 aa22.33■■□□□ 1.17
PTPN11-204ENST00000531326 CHAF1AQ13111 956 aaPredicted RBP22.33■■□□□ 1.17
PTPN11-204ENST00000531326 VPS37DQ86XT2 251 aa22.33■■□□□ 1.17
PTPN11-204ENST00000531326 TMEM39BQ9GZU3 492 aa22.33■■□□□ 1.17
PTPN11-204ENST00000531326 USP44Q9H0E7 712 aa22.33■■□□□ 1.17
PTPN11-204ENST00000531326 ELP3Q9H9T3 547 aa22.33■■□□□ 1.17
PTPN11-204ENST00000531326 CENPFP49454 3210 aa22.32■■□□□ 1.16
PTPN11-204ENST00000531326 TESPA1A2RU30 521 aaPredicted RBP22.32■■□□□ 1.16
PTPN11-204ENST00000531326 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.32■■□□□ 1.16
PTPN11-204ENST00000531326 OPTNQ96CV9 577 aa22.32■■□□□ 1.16
PTPN11-204ENST00000531326 BCAMP50895 628 aa22.31■■□□□ 1.16
PTPN11-204ENST00000531326 CRHR2Q13324 411 aa22.31■■□□□ 1.16
PTPN11-204ENST00000531326 CAVIN4Q5BKX8 364 aa22.31■■□□□ 1.16
PTPN11-204ENST00000531326 INTS3Q68E01 1043 aaKnown RBP22.31■■□□□ 1.16
PTPN11-204ENST00000531326 OTOP1Q7RTM1 612 aa22.31■■□□□ 1.16
PTPN11-204ENST00000531326 CNKSR2Q8WXI2 1034 aa22.31■■□□□ 1.16
PTPN11-204ENST00000531326 CLUAP1Q96AJ1 413 aa22.31■■□□□ 1.16
PTPN11-204ENST00000531326 TRIM17Q9Y577 477 aa22.31■■□□□ 1.16
PTPN11-204ENST00000531326 HDLBPQ00341 1268 aaKnown RBP22.3■■□□□ 1.16
PTPN11-204ENST00000531326 TBC1D22AQ8WUA7 517 aa22.3■■□□□ 1.16
PTPN11-204ENST00000531326 MS4A4AQ96JQ5 239 aa22.3■■□□□ 1.16
PTPN11-204ENST00000531326 FRAT2O75474 233 aaPredicted RBP22.29■■□□□ 1.16
PTPN11-204ENST00000531326 RLBP1P12271 317 aa22.29■■□□□ 1.16
PTPN11-204ENST00000531326 FGFR2P21802 821 aa22.29■■□□□ 1.16
PTPN11-204ENST00000531326 CACNB3P54284 484 aa22.29■■□□□ 1.16
PTPN11-204ENST00000531326 CAP1Q01518 475 aa22.29■■□□□ 1.16
PTPN11-204ENST00000531326 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.29■■□□□ 1.16
PTPN11-204ENST00000531326 RFX5P48382 616 aaPredicted RBP22.28■■□□□ 1.16
PTPN11-204ENST00000531326 TNNI2P48788 182 aa22.28■■□□□ 1.16
PTPN11-204ENST00000531326 VGLL4Q14135 290 aa22.28■■□□□ 1.16
PTPN11-204ENST00000531326 OTUD7BQ6GQQ9 843 aa22.28■■□□□ 1.16
PTPN11-204ENST00000531326 TMEM57Q8N5G2 664 aa22.28■■□□□ 1.16
PTPN11-204ENST00000531326 CD99L2Q8TCZ2 262 aa22.28■■□□□ 1.16
PTPN11-204ENST00000531326 TEKT1Q969V4 418 aa22.28■■□□□ 1.16
PTPN11-204ENST00000531326 MKI67P46013 3256 aaKnown RBP22.27■■□□□ 1.16
PTPN11-204ENST00000531326 MAP3K9P80192 1104 aa22.26■■□□□ 1.15
PTPN11-204ENST00000531326 PUM3Q15397 648 aaKnown RBP22.26■■□□□ 1.15
PTPN11-204ENST00000531326 APOBEC3HQ6NTF7 200 aaKnown RBP22.26■■□□□ 1.15
PTPN11-204ENST00000531326 BRI3BPQ8WY22 251 aa22.26■■□□□ 1.15
PTPN11-204ENST00000531326 ERO1AQ96HE7 468 aa22.26■■□□□ 1.15
PTPN11-204ENST00000531326 ZDHHC15Q96MV8 337 aa22.26■■□□□ 1.15
PTPN11-204ENST00000531326 MRIQ9BWK5 157 aa22.26■■□□□ 1.15
PTPN11-204ENST00000531326 MYH13Q9UKX3 1938 aa22.25■■□□□ 1.15
PTPN11-204ENST00000531326 PRPF38BQ5VTL8 546 aaKnown RBP22.25■■□□□ 1.15
PTPN11-204ENST00000531326 FTSJ3Q8IY81 847 aaKnown RBP22.25■■□□□ 1.15
PTPN11-204ENST00000531326 PANK1Q8TE04 598 aa22.25■■□□□ 1.15
PTPN11-204ENST00000531326 BRCA2P51587 3418 aa22.24■■□□□ 1.15
PTPN11-204ENST00000531326 EYA2O00167 538 aa22.24■■□□□ 1.15
PTPN11-204ENST00000531326 IFIT1P09914 478 aaKnown RBP22.24■■□□□ 1.15
PTPN11-204ENST00000531326 SP3Q02447 781 aa22.24■■□□□ 1.15
PTPN11-204ENST00000531326 PTPN22Q9Y2R2 807 aa22.24■■□□□ 1.15
PTPN11-204ENST00000531326 CCL15-CCL14A0A0B4J2E2 113 aa22.23■■□□□ 1.15
PTPN11-204ENST00000531326 CCL15Q16663 113 aa22.23■■□□□ 1.15
PTPN11-204ENST00000531326 ATG9AQ7Z3C6 839 aa22.23■■□□□ 1.15
PTPN11-204ENST00000531326 FAM83AQ86UY5 434 aa22.23■■□□□ 1.15
PTPN11-204ENST00000531326 OTUD5Q96G74 571 aa22.23■■□□□ 1.15
PTPN11-204ENST00000531326 SUGT1Q9Y2Z0 365 aa22.23■■□□□ 1.15
PTPN11-204ENST00000531326 CSADQ9Y600 493 aa22.23■■□□□ 1.15
PTPN11-204ENST00000531326 SNCAIPQ9Y6H5 919 aa22.23■■□□□ 1.15
PTPN11-204ENST00000531326 MS4A1P11836 297 aa22.22■■□□□ 1.15
PTPN11-204ENST00000531326 GTF2A2P52657 109 aa22.22■■□□□ 1.15
PTPN11-204ENST00000531326 FKBP1CQ5VVH2 108 aa22.22■■□□□ 1.15
PTPN11-204ENST00000531326 HHIPL2Q6UWX4 724 aa22.22■■□□□ 1.15
PTPN11-204ENST00000531326 FAM43AQ8N2R8 423 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms