RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 TDRD3Q9H7E2 651 aaKnown RBP20.03■□□□□ 0.8
RELA-216ENST00000531238 SUGT1Q9Y2Z0 365 aa20.03■□□□□ 0.8
RELA-216ENST00000531238 HDLBPQ00341 1268 aaKnown RBP20.02■□□□□ 0.8
RELA-216ENST00000531238 CYP4F22Q6NT55 531 aa20.02■□□□□ 0.8
RELA-216ENST00000531238 APOBEC3HQ6NTF7 200 aaKnown RBP20.02■□□□□ 0.8
RELA-216ENST00000531238 PI16Q6UXB8 463 aa20.02■□□□□ 0.8
RELA-216ENST00000531238 CCDC8Q9H0W5 538 aaPredicted RBP20.02■□□□□ 0.8
RELA-216ENST00000531238 TLR7Q9NYK1 1049 aaKnown RBP20.02■□□□□ 0.8
RELA-216ENST00000531238 HMG20BQ9P0W2 317 aa20.02■□□□□ 0.8
RELA-216ENST00000531238 ZNF70Q9UC06 446 aaPredicted RBP20.02■□□□□ 0.8
RELA-216ENST00000531238 SALL1Q9NSC2 1324 aa20.02■□□□□ 0.79
RELA-216ENST00000531238 ARID4AP29374 1257 aaPredicted RBP20.01■□□□□ 0.79
RELA-216ENST00000531238 MOB2Q70IA6 237 aa20.01■□□□□ 0.79
RELA-216ENST00000531238 DEFB129Q9H1M3 183 aa20.01■□□□□ 0.79
RELA-216ENST00000531238 CHMP4BQ9H444 224 aaKnown RBP20.01■□□□□ 0.79
RELA-216ENST00000531238 GBA2Q9HCG7 927 aaPredicted RBP20.01■□□□□ 0.79
RELA-216ENST00000531238 ARAP2Q8WZ64 1704 aa20.01■□□□□ 0.79
RELA-216ENST00000531238 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
RELA-216ENST00000531238 GORABQ5T7V8 394 aa20■□□□□ 0.79
RELA-216ENST00000531238 APOBEC3FQ8IUX4 373 aaKnown RBP20■□□□□ 0.79
RELA-216ENST00000531238 ZDHHC15Q96MV8 337 aa20■□□□□ 0.79
RELA-216ENST00000531238 DBNLQ9UJU6 430 aaKnown RBP20■□□□□ 0.79
RELA-216ENST00000531238 WDR33Q9C0J8 1336 aaKnown RBP20■□□□□ 0.79
RELA-216ENST00000531238 MCAMP43121 646 aa19.99■□□□□ 0.79
RELA-216ENST00000531238 DIXDC1Q155Q3 683 aa19.99■□□□□ 0.79
RELA-216ENST00000531238 HHIPL2Q6UWX4 724 aa19.99■□□□□ 0.79
RELA-216ENST00000531238 TBC1D9Q6ZT07 1266 aa19.99■□□□□ 0.79
RELA-216ENST00000531238 C2orf69Q8N8R5 385 aa19.99■□□□□ 0.79
RELA-216ENST00000531238 RHPN1Q8TCX5 695 aa19.99■□□□□ 0.79
RELA-216ENST00000531238 TEKT1Q969V4 418 aa19.99■□□□□ 0.79
RELA-216ENST00000531238 VEZTQ9HBM0 779 aa19.99■□□□□ 0.79
RELA-216ENST00000531238 IL1RAPL2Q9NP60 686 aa19.99■□□□□ 0.79
RELA-216ENST00000531238 LDHBP07195 334 aaKnown RBP19.98■□□□□ 0.79
RELA-216ENST00000531238 HUNKP57058 714 aa19.98■□□□□ 0.79
RELA-216ENST00000531238 SPATA5Q8NB90 893 aa19.98■□□□□ 0.79
RELA-216ENST00000531238 ZNF384Q8TF68 577 aa19.98■□□□□ 0.79
RELA-216ENST00000531238 CAPNS2Q96L46 248 aa19.98■□□□□ 0.79
RELA-216ENST00000531238 CRBNQ96SW2 442 aa19.98■□□□□ 0.79
RELA-216ENST00000531238 FZD1Q9UP38 647 aa19.98■□□□□ 0.79
RELA-216ENST00000531238 PCDHB15Q9Y5E8 787 aa19.98■□□□□ 0.79
RELA-216ENST00000531238 PDS5AQ29RF7 1337 aaKnown RBP19.98■□□□□ 0.79
RELA-216ENST00000531238 APBB1O00213 710 aa19.97■□□□□ 0.79
RELA-216ENST00000531238 MYO1BO43795 1136 aa19.97■□□□□ 0.79
RELA-216ENST00000531238 CACNB3P54284 484 aa19.97■□□□□ 0.79
RELA-216ENST00000531238 RASA3Q14644 834 aa19.97■□□□□ 0.79
RELA-216ENST00000531238 CDAN1Q8IWY9 1227 aa19.97■□□□□ 0.79
RELA-216ENST00000531238 HHIPL1Q96JK4 782 aa19.97■□□□□ 0.79
RELA-216ENST00000531238 SNRKQ9NRH2 765 aa19.97■□□□□ 0.79
RELA-216ENST00000531238 ABCF2Q9UG63 623 aa19.97■□□□□ 0.79
RELA-216ENST00000531238 TCP10L2B9ZVM9 353 aa19.96■□□□□ 0.79
RELA-216ENST00000531238 AOC2O75106 756 aa19.96■□□□□ 0.79
RELA-216ENST00000531238 HMMRO75330 724 aa19.96■□□□□ 0.79
RELA-216ENST00000531238 NBPF12Q5TAG4 269 aaPredicted RBP19.96■□□□□ 0.79
RELA-216ENST00000531238 ERC1Q8IUD2 1116 aa19.96■□□□□ 0.79
RELA-216ENST00000531238 ZIC5Q96T25 663 aa19.96■□□□□ 0.79
RELA-216ENST00000531238 DAGLAQ9Y4D2 1042 aa19.96■□□□□ 0.79
RELA-216ENST00000531238 UBE2Q2LH0YL09 131 aa19.95■□□□□ 0.78
RELA-216ENST00000531238 UQCRFS1P1P0C7P4 283 aa19.95■□□□□ 0.78
RELA-216ENST00000531238 GRM1Q13255 1194 aa19.95■□□□□ 0.78
RELA-216ENST00000531238 HSP90AB4PQ58FF6 505 aa19.95■□□□□ 0.78
RELA-216ENST00000531238 CCDC158Q5M9N0 1113 aa19.95■□□□□ 0.78
RELA-216ENST00000531238 TTC39AQ5SRH9 613 aa19.95■□□□□ 0.78
RELA-216ENST00000531238 PAXIP1Q6ZW49 1069 aaPredicted RBP19.95■□□□□ 0.78
RELA-216ENST00000531238 ZNF512BQ96KM6 892 aaPredicted RBP19.95■□□□□ 0.78
RELA-216ENST00000531238 TEPSINQ96N21 525 aa19.95■□□□□ 0.78
RELA-216ENST00000531238 FAM155AB1AL88 458 aaPredicted RBP19.94■□□□□ 0.78
RELA-216ENST00000531238 CYP2E1P05181 493 aaPredicted RBP19.94■□□□□ 0.78
RELA-216ENST00000531238 PRKG1Q13976 671 aa19.94■□□□□ 0.78
RELA-216ENST00000531238 CDC42EP5Q6NZY7 148 aa19.94■□□□□ 0.78
RELA-216ENST00000531238 AACSQ86V21 672 aa19.94■□□□□ 0.78
RELA-216ENST00000531238 KIF1BPQ96EK5 621 aa19.94■□□□□ 0.78
RELA-216ENST00000531238 MAST3O60307 1309 aa19.94■□□□□ 0.78
RELA-216ENST00000531238 RAB11FIP3O75154 756 aa19.93■□□□□ 0.78
RELA-216ENST00000531238 ZAP70P43403 619 aa19.93■□□□□ 0.78
RELA-216ENST00000531238 MECOMQ03112 1051 aa19.93■□□□□ 0.78
RELA-216ENST00000531238 RGMBQ6NW40 437 aa19.93■□□□□ 0.78
RELA-216ENST00000531238 ZGPATQ8N5A5 531 aaKnown RBP19.93■□□□□ 0.78
RELA-216ENST00000531238 TMEM39BQ9GZU3 492 aa19.93■□□□□ 0.78
RELA-216ENST00000531238 PPP2R3BQ9Y5P8 575 aa19.93■□□□□ 0.78
RELA-216ENST00000531238 MYH13Q9UKX3 1938 aa19.93■□□□□ 0.78
RELA-216ENST00000531238 SSC5DA1L4H1 1573 aa19.92■□□□□ 0.78
RELA-216ENST00000531238 ECE1P42892 770 aa19.92■□□□□ 0.78
RELA-216ENST00000531238 FKBP1BP68106 108 aa19.92■□□□□ 0.78
RELA-216ENST00000531238 ERICH6Q7L0X2 663 aa19.92■□□□□ 0.78
RELA-216ENST00000531238 NSUN4Q96CB9 384 aaKnown RBP19.92■□□□□ 0.78
RELA-216ENST00000531238 FAM163AQ96GL9 167 aaPredicted RBP19.92■□□□□ 0.78
RELA-216ENST00000531238 DCTPP1Q9H773 170 aa19.92■□□□□ 0.78
RELA-216ENST00000531238 NDUFB9Q9Y6M9 179 aa19.92■□□□□ 0.78
RELA-216ENST00000531238 ECM29Q5VYK3 1845 aa19.91■□□□□ 0.78
RELA-216ENST00000531238 SMARCA5O60264 1052 aaPredicted RBP19.91■□□□□ 0.78
RELA-216ENST00000531238 USP2O75604 605 aaPredicted RBP19.91■□□□□ 0.78
RELA-216ENST00000531238 HSPA1AP0DMV8 641 aaKnown RBP19.91■□□□□ 0.78
RELA-216ENST00000531238 HSPA1BP0DMV9 641 aaKnown RBP19.91■□□□□ 0.78
RELA-216ENST00000531238 ZNF157P51786 506 aaPredicted RBP19.91■□□□□ 0.78
RELA-216ENST00000531238 SPTY2D1Q68D10 685 aaPredicted RBP19.91■□□□□ 0.78
RELA-216ENST00000531238 BCL11AQ9H165 835 aa19.91■□□□□ 0.78
RELA-216ENST00000531238 USP40Q9NVE5 1235 aa19.91■□□□□ 0.78
RELA-216ENST00000531238 GAKO14976 1311 aa19.91■□□□□ 0.78
RELA-216ENST00000531238 NFIAQ12857 509 aa19.9■□□□□ 0.78
RELA-216ENST00000531238 LDLRAD1Q5T700 205 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms