RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 ME3Q16798 604 aa12.98□□□□□ -0.33
SRPRA-205ENST00000531104 IMMTQ16891 758 aaKnown RBP12.98□□□□□ -0.33
SRPRA-205ENST00000531104 VPS37DQ86XT2 251 aa12.98□□□□□ -0.33
SRPRA-205ENST00000531104 ZNF384Q8TF68 577 aa12.98□□□□□ -0.33
SRPRA-205ENST00000531104 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
SRPRA-205ENST00000531104 LRP2BPQ9P2M1 347 aa12.98□□□□□ -0.33
SRPRA-205ENST00000531104 IQSEC3Q9UPP2 1182 aaPredicted RBP12.98□□□□□ -0.33
SRPRA-205ENST00000531104 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
SRPRA-205ENST00000531104 TIAM2Q8IVF5 1701 aa12.98□□□□□ -0.33
SRPRA-205ENST00000531104 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
SRPRA-205ENST00000531104 WDR19Q8NEZ3 1342 aa12.97□□□□□ -0.33
SRPRA-205ENST00000531104 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
SRPRA-205ENST00000531104 MBD4O95243 580 aa12.97□□□□□ -0.33
SRPRA-205ENST00000531104 BRD1O95696 1058 aa12.97□□□□□ -0.33
SRPRA-205ENST00000531104 PDE6BP35913 854 aa12.97□□□□□ -0.33
SRPRA-205ENST00000531104 AIDAQ96BJ3 306 aa12.97□□□□□ -0.33
SRPRA-205ENST00000531104 RIOK1Q9BRS2 568 aaKnown RBP12.97□□□□□ -0.33
SRPRA-205ENST00000531104 LARP6Q9BRS8 491 aaKnown RBP12.97□□□□□ -0.33
SRPRA-205ENST00000531104 EPB41L4AQ9HCS5 686 aaPredicted RBP12.97□□□□□ -0.33
SRPRA-205ENST00000531104 STK32BQ9NY57 414 aa12.97□□□□□ -0.33
SRPRA-205ENST00000531104 ANKIB1Q9P2G1 1089 aa12.97□□□□□ -0.33
SRPRA-205ENST00000531104 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
SRPRA-205ENST00000531104 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.97□□□□□ -0.33
SRPRA-205ENST00000531104 IL1R1P14778 569 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 CYP7A1P22680 504 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 EVCP57679 992 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 PKP1Q13835 747 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 Q6ZUG5 572 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 MB21D2Q8IYB1 491 aaPredicted RBP12.96□□□□□ -0.33
SRPRA-205ENST00000531104 IFNL3Q8IZI9 196 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 LCORLQ8N3X6 602 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 NSUN4Q96CB9 384 aaKnown RBP12.96□□□□□ -0.33
SRPRA-205ENST00000531104 TCEANC2Q96MN5 208 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 ARMT1Q9H993 441 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 GGA1Q9UJY5 639 aa12.96□□□□□ -0.33
SRPRA-205ENST00000531104 ZNF213O14771 459 aa12.95□□□□□ -0.34
SRPRA-205ENST00000531104 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
SRPRA-205ENST00000531104 ZNF804AQ7Z570 1209 aa12.95□□□□□ -0.34
SRPRA-205ENST00000531104 TBC1D16Q8TBP0 767 aa12.95□□□□□ -0.34
SRPRA-205ENST00000531104 MASTLQ96GX5 879 aa12.95□□□□□ -0.34
SRPRA-205ENST00000531104 RAI14Q9P0K7 980 aa12.95□□□□□ -0.34
SRPRA-205ENST00000531104 ABCF2Q9UG63 623 aa12.95□□□□□ -0.34
SRPRA-205ENST00000531104 POLLQ9UGP5 575 aa12.95□□□□□ -0.34
SRPRA-205ENST00000531104 EP400Q96L91 3159 aa12.95□□□□□ -0.34
SRPRA-205ENST00000531104 MAGEB6P1A0A0J9YX57 407 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 UFL1O94874 794 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 ALDH1B1P30837 517 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 BAG6P46379 1132 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 HAND2P61296 217 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
SRPRA-205ENST00000531104 STYK1Q6J9G0 422 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 NAA16Q6N069 864 aaPredicted RBP12.94□□□□□ -0.34
SRPRA-205ENST00000531104 TBC1D10CQ8IV04 446 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 CCDC83Q8IWF9 413 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 WDR66Q8TBY9 1149 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 GBP4Q96PP9 640 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 CD209Q9NNX6 404 aa12.94□□□□□ -0.34
SRPRA-205ENST00000531104 NSFL1CQ9UNZ2 370 aaKnown RBP12.94□□□□□ -0.34
SRPRA-205ENST00000531104 PRKAB2O43741 272 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 PFKFB2O60825 505 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 BAG4O95429 457 aaKnown RBP12.93□□□□□ -0.34
SRPRA-205ENST00000531104 ANTXR2P58335 489 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 MECOMQ03112 1051 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 MSL1Q68DK7 614 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 NECAB1Q8N987 351 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 NCOA7Q8NI08 942 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 GTF3C6Q969F1 213 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 ANAPC4Q9UJX5 808 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 SLC4A4Q9Y6R1 1079 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 CCDC88AQ3V6T2 1871 aa12.93□□□□□ -0.34
SRPRA-205ENST00000531104 DDX11L8A8MPP1 907 aa12.92□□□□□ -0.34
SRPRA-205ENST00000531104 PRDX5P30044 214 aa12.92□□□□□ -0.34
SRPRA-205ENST00000531104 MCM5P33992 734 aa12.92□□□□□ -0.34
SRPRA-205ENST00000531104 CHAF1AQ13111 956 aaPredicted RBP12.92□□□□□ -0.34
SRPRA-205ENST00000531104 MIGA1Q8NAN2 632 aa12.92□□□□□ -0.34
SRPRA-205ENST00000531104 BRF1Q92994 677 aa12.92□□□□□ -0.34
SRPRA-205ENST00000531104 ZNF274Q96GC6 653 aaPredicted RBP12.92□□□□□ -0.34
SRPRA-205ENST00000531104 GPR101Q96P66 508 aaPredicted RBP12.92□□□□□ -0.34
SRPRA-205ENST00000531104 NACAP1Q9BZK3 213 aa12.92□□□□□ -0.34
SRPRA-205ENST00000531104 NAPBQ9H115 298 aa12.92□□□□□ -0.34
SRPRA-205ENST00000531104 SMC3Q9UQE7 1217 aa12.92□□□□□ -0.34
SRPRA-205ENST00000531104 TACC3Q9Y6A5 838 aa12.92□□□□□ -0.34
SRPRA-205ENST00000531104 FAM205AQ6ZU69 1335 aa12.91□□□□□ -0.34
SRPRA-205ENST00000531104 APPP05067 770 aa12.91□□□□□ -0.34
SRPRA-205ENST00000531104 PDIA4P13667 645 aaKnown RBP12.91□□□□□ -0.34
SRPRA-205ENST00000531104 PTMSP20962 102 aa12.91□□□□□ -0.34
SRPRA-205ENST00000531104 GJB2P29033 226 aa12.91□□□□□ -0.34
SRPRA-205ENST00000531104 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
SRPRA-205ENST00000531104 NKX2-3Q8TAU0 364 aa12.91□□□□□ -0.34
SRPRA-205ENST00000531104 STAG1Q8WVM7 1258 aa12.91□□□□□ -0.34
SRPRA-205ENST00000531104 LRRC2Q9BYS8 371 aa12.91□□□□□ -0.34
SRPRA-205ENST00000531104 WDR33Q9C0J8 1336 aaKnown RBP12.9□□□□□ -0.34
SRPRA-205ENST00000531104 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
SRPRA-205ENST00000531104 PRC1O43663 620 aa12.9□□□□□ -0.34
SRPRA-205ENST00000531104 DYNLL1P63167 89 aaKnown RBP12.9□□□□□ -0.34
SRPRA-205ENST00000531104 AKNAD1Q5T1N1 836 aa12.9□□□□□ -0.34
SRPRA-205ENST00000531104 DEFB132Q7Z7B7 95 aa12.9□□□□□ -0.34
SRPRA-205ENST00000531104 C2CD5Q86YS7 1000 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms