RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.69■□□□□ 0.58
CCS-206ENST00000530961 MRIQ9BWK5 157 aa18.69■□□□□ 0.58
CCS-206ENST00000530961 BCL11AQ9H165 835 aa18.69■□□□□ 0.58
CCS-206ENST00000530961 MYOZ2Q9NPC6 264 aa18.69■□□□□ 0.58
CCS-206ENST00000530961 WDR33Q9C0J8 1336 aaKnown RBP18.69■□□□□ 0.58
CCS-206ENST00000530961 RASSF10A6NK89 507 aa18.68■□□□□ 0.58
CCS-206ENST00000530961 F8W031 263 aaPredicted RBP18.68■□□□□ 0.58
CCS-206ENST00000530961 IGSF3O75054 1194 aa18.68■□□□□ 0.58
CCS-206ENST00000530961 HDLBPQ00341 1268 aaKnown RBP18.68■□□□□ 0.58
CCS-206ENST00000530961 TTF2Q9UNY4 1162 aaKnown RBP18.68■□□□□ 0.58
CCS-206ENST00000530961 MAST3O60307 1309 aa18.68■□□□□ 0.58
CCS-206ENST00000530961 SPEF2Q9C093 1822 aa18.67■□□□□ 0.58
CCS-206ENST00000530961 TIAM2Q8IVF5 1701 aa18.67■□□□□ 0.58
CCS-206ENST00000530961 LDHBP07195 334 aaKnown RBP18.67■□□□□ 0.58
CCS-206ENST00000530961 SCARF1Q14162 830 aa18.67■□□□□ 0.58
CCS-206ENST00000530961 KIF4BQ2VIQ3 1234 aa18.67■□□□□ 0.58
CCS-206ENST00000530961 TBC1D10BQ4KMP7 808 aaPredicted RBP18.67■□□□□ 0.58
CCS-206ENST00000530961 RBM26Q5T8P6 1007 aaKnown RBP18.67■□□□□ 0.58
CCS-206ENST00000530961 MTMR14Q8NCE2 650 aa18.67■□□□□ 0.58
CCS-206ENST00000530961 TRPM4Q8TD43 1214 aa18.67■□□□□ 0.58
CCS-206ENST00000530961 GPATCH3Q96I76 525 aa18.67■□□□□ 0.58
CCS-206ENST00000530961 SERPINA10Q9UK55 444 aa18.67■□□□□ 0.58
CCS-206ENST00000530961 POTEIP0CG38 1075 aa18.66■□□□□ 0.58
CCS-206ENST00000530961 POTEJP0CG39 1038 aa18.66■□□□□ 0.58
CCS-206ENST00000530961 ATP5JP18859 108 aa18.66■□□□□ 0.58
CCS-206ENST00000530961 HIRAP54198 1017 aaPredicted RBP18.66■□□□□ 0.58
CCS-206ENST00000530961 DLGAP5Q15398 846 aa18.66■□□□□ 0.58
CCS-206ENST00000530961 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
CCS-206ENST00000530961 ABCF2Q9UG63 623 aa18.66■□□□□ 0.58
CCS-206ENST00000530961 PGAP2Q9UHJ9 254 aa18.66■□□□□ 0.58
CCS-206ENST00000530961 CLEC11AQ9Y240 323 aa18.66■□□□□ 0.58
CCS-206ENST00000530961 DICER1Q9UPY3 1922 aaKnown RBP18.65■□□□□ 0.58
CCS-206ENST00000530961 NUCB1Q02818 461 aa18.65■□□□□ 0.58
CCS-206ENST00000530961 GRIK5Q16478 980 aa18.65■□□□□ 0.58
CCS-206ENST00000530961 ERICH6BQ5W0A0 696 aa18.65■□□□□ 0.58
CCS-206ENST00000530961 PI16Q6UXB8 463 aa18.65■□□□□ 0.58
CCS-206ENST00000530961 ERICH6Q7L0X2 663 aa18.65■□□□□ 0.58
CCS-206ENST00000530961 SNRKQ9NRH2 765 aa18.65■□□□□ 0.58
CCS-206ENST00000530961 COL1A1P02452 1464 aaPredicted RBP18.65■□□□□ 0.58
CCS-206ENST00000530961 EGFRP00533 1210 aa18.64■□□□□ 0.57
CCS-206ENST00000530961 PRDX5P30044 214 aa18.64■□□□□ 0.57
CCS-206ENST00000530961 ZAP70P43403 619 aa18.64■□□□□ 0.57
CCS-206ENST00000530961 CFAP100Q494V2 611 aa18.64■□□□□ 0.57
CCS-206ENST00000530961 B4GALNT3Q6L9W6 998 aa18.64■□□□□ 0.57
CCS-206ENST00000530961 HHIPL2Q6UWX4 724 aa18.64■□□□□ 0.57
CCS-206ENST00000530961 CHD1LQ86WJ1 897 aa18.64■□□□□ 0.57
CCS-206ENST00000530961 SLF2Q8IX21 1173 aa18.64■□□□□ 0.57
CCS-206ENST00000530961 TEKT1Q969V4 418 aa18.64■□□□□ 0.57
CCS-206ENST00000530961 ZBED3Q96IU2 234 aaPredicted RBP18.64■□□□□ 0.57
CCS-206ENST00000530961 WNT10BO00744 389 aa18.63■□□□□ 0.57
CCS-206ENST00000530961 CYP2E1P05181 493 aaPredicted RBP18.63■□□□□ 0.57
CCS-206ENST00000530961 CRKP46108 304 aa18.63■□□□□ 0.57
CCS-206ENST00000530961 RBM5P52756 815 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCS-206ENST00000530961 TTF1Q15361 905 aaPredicted RBP18.63■□□□□ 0.57
CCS-206ENST00000530961 TBC1D9Q6ZT07 1266 aa18.63■□□□□ 0.57
CCS-206ENST00000530961 LRP2BPQ9P2M1 347 aa18.63■□□□□ 0.57
CCS-206ENST00000530961 TTC41PQ6P2S7 1318 aa18.63■□□□□ 0.57
CCS-206ENST00000530961 SPDYE2BA6NHP3 402 aa18.62■□□□□ 0.57
CCS-206ENST00000530961 ERC2O15083 957 aa18.62■□□□□ 0.57
CCS-206ENST00000530961 MYO1BO43795 1136 aa18.62■□□□□ 0.57
CCS-206ENST00000530961 SPDYE6P0CI01 402 aa18.62■□□□□ 0.57
CCS-206ENST00000530961 DZIP1Q86YF9 867 aaKnown RBP18.62■□□□□ 0.57
CCS-206ENST00000530961 HAUS7Q99871 368 aa18.62■□□□□ 0.57
CCS-206ENST00000530961 LNPKQ9C0E8 428 aa18.62■□□□□ 0.57
CCS-206ENST00000530961 MX1P20591 662 aa18.61■□□□□ 0.57
CCS-206ENST00000530961 GSTO1P78417 241 aa18.61■□□□□ 0.57
CCS-206ENST00000530961 NBPF9Q3BBW0 867 aa18.61■□□□□ 0.57
CCS-206ENST00000530961 TMED8Q6PL24 325 aaPredicted RBP18.61■□□□□ 0.57
CCS-206ENST00000530961 CNTROBQ8N137 903 aa18.61■□□□□ 0.57
CCS-206ENST00000530961 DCPSQ96C86 337 aaKnown RBP18.61■□□□□ 0.57
CCS-206ENST00000530961 FAM163AQ96GL9 167 aaPredicted RBP18.61■□□□□ 0.57
CCS-206ENST00000530961 ZDHHC15Q96MV8 337 aa18.61■□□□□ 0.57
CCS-206ENST00000530961 BOLA2Q9H3K6 86 aa18.61■□□□□ 0.57
CCS-206ENST00000530961 RAI14Q9P0K7 980 aa18.61■□□□□ 0.57
CCS-206ENST00000530961 GLRX3O76003 335 aaKnown RBP18.6■□□□□ 0.57
CCS-206ENST00000530961 LDHCP07864 332 aa18.6■□□□□ 0.57
CCS-206ENST00000530961 DGKZQ13574 1117 aa18.6■□□□□ 0.57
CCS-206ENST00000530961 CDC37L1Q7L3B6 337 aa18.6■□□□□ 0.57
CCS-206ENST00000530961 PRMT6Q96LA8 375 aaPredicted RBP18.6■□□□□ 0.57
CCS-206ENST00000530961 STAP2Q9UGK3 403 aa18.6■□□□□ 0.57
CCS-206ENST00000530961 ABT1Q9ULW3 272 aaKnown RBP18.6■□□□□ 0.57
CCS-206ENST00000530961 A0A1B0GUL6 1792 aa18.6■□□□□ 0.57
CCS-206ENST00000530961 PITPNM2Q9BZ72 1349 aa18.59■□□□□ 0.57
CCS-206ENST00000530961 ITGBL1O95965 494 aaPredicted RBP18.59■□□□□ 0.57
CCS-206ENST00000530961 MECOMQ03112 1051 aa18.59■□□□□ 0.57
CCS-206ENST00000530961 MAP3K12Q12852 859 aa18.59■□□□□ 0.57
CCS-206ENST00000530961 MAP1SQ66K74 1059 aaPredicted RBP18.59■□□□□ 0.57
CCS-206ENST00000530961 OTUD7AQ8TE49 926 aaPredicted RBP18.59■□□□□ 0.57
CCS-206ENST00000530961 NSUN4Q96CB9 384 aaKnown RBP18.59■□□□□ 0.57
CCS-206ENST00000530961 DNAJC2Q99543 621 aaKnown RBP18.59■□□□□ 0.57
CCS-206ENST00000530961 PIH1D3Q9NQM4 214 aaKnown RBP18.59■□□□□ 0.57
CCS-206ENST00000530961 GGA3Q9NZ52 723 aa18.59■□□□□ 0.57
CCS-206ENST00000530961 CCDC88AQ3V6T2 1871 aa18.58■□□□□ 0.57
CCS-206ENST00000530961 SALL3Q9BXA9 1300 aa18.58■□□□□ 0.57
CCS-206ENST00000530961 GOLIM4O00461 696 aa18.58■□□□□ 0.56
CCS-206ENST00000530961 ECE1P42892 770 aa18.58■□□□□ 0.56
CCS-206ENST00000530961 DIXDC1Q155Q3 683 aa18.58■□□□□ 0.56
CCS-206ENST00000530961 ANGEL2Q5VTE6 544 aaKnown RBP18.58■□□□□ 0.56
CCS-206ENST00000530961 APOBEC3HQ6NTF7 200 aaKnown RBP18.58■□□□□ 0.56
CCS-206ENST00000530961 CENPQQ7L2Z9 268 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms