RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 STAP2Q9UGK3 403 aa26.02■■□□□ 1.76
CAPN1-220ENST00000530567 DOCK2Q92608 1830 aa26.02■■□□□ 1.76
CAPN1-220ENST00000530567 POTEIP0CG38 1075 aa26.01■■□□□ 1.75
CAPN1-220ENST00000530567 POTEJP0CG39 1038 aa26.01■■□□□ 1.75
CAPN1-220ENST00000530567 MMP14P50281 582 aa26.01■■□□□ 1.75
CAPN1-220ENST00000530567 PPP4R2Q9NY27 417 aa26.01■■□□□ 1.75
CAPN1-220ENST00000530567 LDHBP07195 334 aaKnown RBP26■■□□□ 1.75
CAPN1-220ENST00000530567 PDE4AP27815 886 aa26■■□□□ 1.75
CAPN1-220ENST00000530567 PDE1AP54750 535 aa26■■□□□ 1.75
CAPN1-220ENST00000530567 KIF4BQ2VIQ3 1234 aa26■■□□□ 1.75
CAPN1-220ENST00000530567 USP50Q70EL3 339 aaPredicted RBP26■■□□□ 1.75
CAPN1-220ENST00000530567 ZNF384Q8TF68 577 aa26■■□□□ 1.75
CAPN1-220ENST00000530567 EDC3Q96F86 508 aaKnown RBP26■■□□□ 1.75
CAPN1-220ENST00000530567 ZBED3Q96IU2 234 aaPredicted RBP26■■□□□ 1.75
CAPN1-220ENST00000530567 HDAC9Q9UKV0 1011 aa26■■□□□ 1.75
CAPN1-220ENST00000530567 PCDHAC2Q9Y5I4 1007 aa26■■□□□ 1.75
CAPN1-220ENST00000530567 MAST2Q6P0Q8 1798 aa26■■□□□ 1.75
CAPN1-220ENST00000530567 SERPINA10Q9UK55 444 aa25.99■■□□□ 1.75
CAPN1-220ENST00000530567 MAST3O60307 1309 aa25.98■■□□□ 1.75
CAPN1-220ENST00000530567 HDLBPQ00341 1268 aaKnown RBP25.98■■□□□ 1.75
CAPN1-220ENST00000530567 RBM26Q5T8P6 1007 aaKnown RBP25.98■■□□□ 1.75
CAPN1-220ENST00000530567 PNMA8AQ86V59 439 aaPredicted RBP25.98■■□□□ 1.75
CAPN1-220ENST00000530567 PLEKHM2Q8IWE5 1019 aa25.98■■□□□ 1.75
CAPN1-220ENST00000530567 DNAJC2Q99543 621 aaKnown RBP25.98■■□□□ 1.75
CAPN1-220ENST00000530567 GOLIM4O00461 696 aa25.97■■□□□ 1.75
CAPN1-220ENST00000530567 CRKP46108 304 aa25.97■■□□□ 1.75
CAPN1-220ENST00000530567 DIXDC1Q155Q3 683 aa25.97■■□□□ 1.75
CAPN1-220ENST00000530567 CFAP100Q494V2 611 aa25.97■■□□□ 1.75
CAPN1-220ENST00000530567 EAPPQ56P03 285 aaPredicted RBP25.97■■□□□ 1.75
CAPN1-220ENST00000530567 SPTY2D1Q68D10 685 aaPredicted RBP25.97■■□□□ 1.75
CAPN1-220ENST00000530567 ERICH6Q7L0X2 663 aa25.97■■□□□ 1.75
CAPN1-220ENST00000530567 MTMR14Q8NCE2 650 aa25.97■■□□□ 1.75
CAPN1-220ENST00000530567 AOX1Q06278 1338 aa25.97■■□□□ 1.75
CAPN1-220ENST00000530567 GLRX3O76003 335 aaKnown RBP25.97■■□□□ 1.75
CAPN1-220ENST00000530567 MECOMQ03112 1051 aa25.97■■□□□ 1.75
CAPN1-220ENST00000530567 MRIQ9BWK5 157 aa25.97■■□□□ 1.75
CAPN1-220ENST00000530567 ASTN2O75129 1339 aaPredicted RBP25.96■■□□□ 1.75
CAPN1-220ENST00000530567 MYH2Q9UKX2 1941 aa25.96■■□□□ 1.75
CAPN1-220ENST00000530567 WNT10BO00744 389 aa25.96■■□□□ 1.75
CAPN1-220ENST00000530567 NSUN4Q96CB9 384 aaKnown RBP25.96■■□□□ 1.75
CAPN1-220ENST00000530567 PAG1Q9NWQ8 432 aa25.96■■□□□ 1.75
CAPN1-220ENST00000530567 LRP2BPQ9P2M1 347 aa25.96■■□□□ 1.75
CAPN1-220ENST00000530567 SPDYE2BA6NHP3 402 aa25.95■■□□□ 1.74
CAPN1-220ENST00000530567 ERC2O15083 957 aa25.95■■□□□ 1.74
CAPN1-220ENST00000530567 SPDYE6P0CI01 402 aa25.95■■□□□ 1.74
CAPN1-220ENST00000530567 NBPF9Q3BBW0 867 aa25.95■■□□□ 1.74
CAPN1-220ENST00000530567 LDHDQ86WU2 507 aa25.95■■□□□ 1.74
CAPN1-220ENST00000530567 DZIP1Q86YF9 867 aaKnown RBP25.95■■□□□ 1.74
CAPN1-220ENST00000530567 TEKT1Q969V4 418 aa25.95■■□□□ 1.74
CAPN1-220ENST00000530567 OSBPL3Q9H4L5 887 aa25.95■■□□□ 1.74
CAPN1-220ENST00000530567 RAI14Q9P0K7 980 aa25.95■■□□□ 1.74
CAPN1-220ENST00000530567 ECM29Q5VYK3 1845 aa25.94■■□□□ 1.74
CAPN1-220ENST00000530567 DLGAP5Q15398 846 aa25.94■■□□□ 1.74
CAPN1-220ENST00000530567 HHIPL2Q6UWX4 724 aa25.94■■□□□ 1.74
CAPN1-220ENST00000530567 PRMT6Q96LA8 375 aaPredicted RBP25.94■■□□□ 1.74
CAPN1-220ENST00000530567 ZDHHC15Q96MV8 337 aa25.94■■□□□ 1.74
CAPN1-220ENST00000530567 PGAP2Q9UHJ9 254 aa25.94■■□□□ 1.74
CAPN1-220ENST00000530567 DAGLAQ9Y4D2 1042 aa25.94■■□□□ 1.74
CAPN1-220ENST00000530567 GAKO14976 1311 aa25.93■■□□□ 1.74
CAPN1-220ENST00000530567 TTF1Q15361 905 aaPredicted RBP25.93■■□□□ 1.74
CAPN1-220ENST00000530567 IDH1O75874 414 aaKnown RBP25.92■■□□□ 1.74
CAPN1-220ENST00000530567 APOBEC3HQ6NTF7 200 aaKnown RBP25.92■■□□□ 1.74
CAPN1-220ENST00000530567 ZC3H15Q8WU90 426 aaKnown RBP25.92■■□□□ 1.74
CAPN1-220ENST00000530567 FAM163AQ96GL9 167 aaPredicted RBP25.92■■□□□ 1.74
CAPN1-220ENST00000530567 IGSF3O75054 1194 aa25.91■■□□□ 1.74
CAPN1-220ENST00000530567 RBM5P52756 815 aaKnown RBP eCLIP25.91■■□□□ 1.74
CAPN1-220ENST00000530567 TOMM70O94826 608 aa25.9■■□□□ 1.74
CAPN1-220ENST00000530567 MAP4K4O95819 1239 aaPredicted RBP25.9■■□□□ 1.74
CAPN1-220ENST00000530567 SKAP1Q86WV1 359 aa25.9■■□□□ 1.74
CAPN1-220ENST00000530567 GGA3Q9NZ52 723 aa25.9■■□□□ 1.74
CAPN1-220ENST00000530567 MROH7-TTC4A0A0A0MT08 1334 aa25.9■■□□□ 1.74
CAPN1-220ENST00000530567 RBM46Q8TBY0 533 aaKnown RBP25.89■■□□□ 1.74
CAPN1-220ENST00000530567 MYH7P12883 1935 aa25.89■■□□□ 1.74
CAPN1-220ENST00000530567 MAP3K12Q12852 859 aa25.88■■□□□ 1.73
CAPN1-220ENST00000530567 ANGEL2Q5VTE6 544 aaKnown RBP25.88■■□□□ 1.73
CAPN1-220ENST00000530567 NAA16Q6N069 864 aaPredicted RBP25.88■■□□□ 1.73
CAPN1-220ENST00000530567 CHADLQ6NUI6 762 aa25.88■■□□□ 1.73
CAPN1-220ENST00000530567 ADGRA1Q86SQ6 560 aa25.88■■□□□ 1.73
CAPN1-220ENST00000530567 CLEC11AQ9Y240 323 aa25.88■■□□□ 1.73
CAPN1-220ENST00000530567 POLR2AP24928 1970 aaKnown RBP25.88■■□□□ 1.73
CAPN1-220ENST00000530567 GSTO1P78417 241 aa25.88■■□□□ 1.73
CAPN1-220ENST00000530567 MAP1SQ66K74 1059 aaPredicted RBP25.88■■□□□ 1.73
CAPN1-220ENST00000530567 SLF2Q8IX21 1173 aa25.88■■□□□ 1.73
CAPN1-220ENST00000530567 MAGEB6Q8N7X4 407 aa25.88■■□□□ 1.73
CAPN1-220ENST00000530567 KBTBD3Q8NAB2 608 aa25.88■■□□□ 1.73
CAPN1-220ENST00000530567 PDE6AP16499 860 aa25.87■■□□□ 1.73
CAPN1-220ENST00000530567 SPDYE2Q495Y8 402 aa25.87■■□□□ 1.73
CAPN1-220ENST00000530567 TDRD3Q9H7E2 651 aaKnown RBP25.87■■□□□ 1.73
CAPN1-220ENST00000530567 PITPNM2Q9BZ72 1349 aa25.86■■□□□ 1.73
CAPN1-220ENST00000530567 GPR75-ASB3A0A0A6YYF3 556 aa25.86■■□□□ 1.73
CAPN1-220ENST00000530567 TCRBV5S4A2TA0A5A2 114 aa25.86■■□□□ 1.73
CAPN1-220ENST00000530567 CLRN2A0PK11 232 aa25.86■■□□□ 1.73
CAPN1-220ENST00000530567 CHGBP05060 677 aa25.86■■□□□ 1.73
CAPN1-220ENST00000530567 LDHCP07864 332 aa25.85■■□□□ 1.73
CAPN1-220ENST00000530567 ADD2P35612 726 aa25.85■■□□□ 1.73
CAPN1-220ENST00000530567 BTDP43251 543 aa25.85■■□□□ 1.73
CAPN1-220ENST00000530567 SLFNL1Q499Z3 407 aa25.85■■□□□ 1.73
CAPN1-220ENST00000530567 SLC9C2Q5TAH2 1124 aa25.85■■□□□ 1.73
CAPN1-220ENST00000530567 SMC1BQ8NDV3 1235 aa25.85■■□□□ 1.73
CAPN1-220ENST00000530567 ZNF70Q9UC06 446 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms