RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 OPTNQ96CV9 577 aa18.84■□□□□ 0.61
CAPN1-219ENST00000530495 MS4A4AQ96JQ5 239 aa18.84■□□□□ 0.61
CAPN1-219ENST00000530495 ELP3Q9H9T3 547 aa18.84■□□□□ 0.61
CAPN1-219ENST00000530495 PTPN22Q9Y2R2 807 aa18.84■□□□□ 0.61
CAPN1-219ENST00000530495 HDLBPQ00341 1268 aaKnown RBP18.83■□□□□ 0.6
CAPN1-219ENST00000530495 RABL6Q3YEC7 729 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-219ENST00000530495 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-219ENST00000530495 TCP10L2B9ZVM9 353 aa18.82■□□□□ 0.6
CAPN1-219ENST00000530495 TNNI2P48788 182 aa18.82■□□□□ 0.6
CAPN1-219ENST00000530495 SP3Q02447 781 aa18.82■□□□□ 0.6
CAPN1-219ENST00000530495 CDAN1Q8IWY9 1227 aa18.82■□□□□ 0.6
CAPN1-219ENST00000530495 CD99L2Q8TCZ2 262 aa18.82■□□□□ 0.6
CAPN1-219ENST00000530495 MAP3K9P80192 1104 aa18.81■□□□□ 0.6
CAPN1-219ENST00000530495 GRIK5Q16478 980 aa18.81■□□□□ 0.6
CAPN1-219ENST00000530495 CAVIN4Q5BKX8 364 aa18.81■□□□□ 0.6
CAPN1-219ENST00000530495 VPS37DQ86XT2 251 aa18.81■□□□□ 0.6
CAPN1-219ENST00000530495 MRIQ9BWK5 157 aa18.81■□□□□ 0.6
CAPN1-219ENST00000530495 TMEM39BQ9GZU3 492 aa18.81■□□□□ 0.6
CAPN1-219ENST00000530495 BICC1Q9H694 974 aaKnown RBP18.81■□□□□ 0.6
CAPN1-219ENST00000530495 EFCC1Q9HA90 598 aa18.81■□□□□ 0.6
CAPN1-219ENST00000530495 PDE8BO95263 885 aa18.8■□□□□ 0.6
CAPN1-219ENST00000530495 LRRC24Q50LG9 513 aa18.8■□□□□ 0.6
CAPN1-219ENST00000530495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.8■□□□□ 0.6
CAPN1-219ENST00000530495 TBC1D22AQ8WUA7 517 aa18.8■□□□□ 0.6
CAPN1-219ENST00000530495 IQSEC3Q9UPP2 1182 aaPredicted RBP18.8■□□□□ 0.6
CAPN1-219ENST00000530495 RBBP6Q7Z6E9 1792 aaKnown RBP18.79■□□□□ 0.6
CAPN1-219ENST00000530495 POTEFA5A3E0 1075 aa18.79■□□□□ 0.6
CAPN1-219ENST00000530495 GTF2A2P52657 109 aa18.79■□□□□ 0.6
CAPN1-219ENST00000530495 VGLL4Q14135 290 aa18.79■□□□□ 0.6
CAPN1-219ENST00000530495 FAM9BQ8IZU0 186 aa18.79■□□□□ 0.6
CAPN1-219ENST00000530495 ANKRD44Q8N8A2 993 aa18.79■□□□□ 0.6
CAPN1-219ENST00000530495 VGLL2Q8N8G2 317 aa18.79■□□□□ 0.6
CAPN1-219ENST00000530495 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
CAPN1-219ENST00000530495 BRI3BPQ8WY22 251 aa18.79■□□□□ 0.6
CAPN1-219ENST00000530495 ARMC5Q96C12 935 aa18.79■□□□□ 0.6
CAPN1-219ENST00000530495 HTTP42858 3142 aa18.78■□□□□ 0.6
CAPN1-219ENST00000530495 ZNF521Q96K83 1311 aa18.78■□□□□ 0.6
CAPN1-219ENST00000530495 FRAT2O75474 233 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-219ENST00000530495 CAP1Q01518 475 aa18.78■□□□□ 0.6
CAPN1-219ENST00000530495 CHAF1AQ13111 956 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-219ENST00000530495 METTL24Q5JXM2 366 aa18.78■□□□□ 0.6
CAPN1-219ENST00000530495 TEKT1Q969V4 418 aa18.78■□□□□ 0.6
CAPN1-219ENST00000530495 CSADQ9Y600 493 aa18.78■□□□□ 0.6
CAPN1-219ENST00000530495 CCL15-CCL14A0A0B4J2E2 113 aa18.77■□□□□ 0.6
CAPN1-219ENST00000530495 CCL15Q16663 113 aa18.77■□□□□ 0.6
CAPN1-219ENST00000530495 MRPL50Q8N5N7 158 aaKnown RBP18.77■□□□□ 0.6
CAPN1-219ENST00000530495 ZDHHC15Q96MV8 337 aa18.77■□□□□ 0.6
CAPN1-219ENST00000530495 ZFYVE28Q9HCC9 887 aa18.77■□□□□ 0.6
CAPN1-219ENST00000530495 BCAMP50895 628 aa18.76■□□□□ 0.59
CAPN1-219ENST00000530495 ARHGEF6Q15052 776 aa18.76■□□□□ 0.59
CAPN1-219ENST00000530495 TAF1CQ15572 869 aaPredicted RBP18.76■□□□□ 0.59
CAPN1-219ENST00000530495 FKBP1CQ5VVH2 108 aa18.76■□□□□ 0.59
CAPN1-219ENST00000530495 FAM83AQ86UY5 434 aa18.76■□□□□ 0.59
CAPN1-219ENST00000530495 OTUD5Q96G74 571 aa18.76■□□□□ 0.59
CAPN1-219ENST00000530495 SUGT1Q9Y2Z0 365 aa18.76■□□□□ 0.59
CAPN1-219ENST00000530495 PTPRCP08575 1304 aa18.75■□□□□ 0.59
CAPN1-219ENST00000530495 SPDYE5A6NIY4 337 aa18.75■□□□□ 0.59
CAPN1-219ENST00000530495 CACNB3P54284 484 aa18.75■□□□□ 0.59
CAPN1-219ENST00000530495 APOBEC3HQ6NTF7 200 aaKnown RBP18.75■□□□□ 0.59
CAPN1-219ENST00000530495 FAM43AQ8N2R8 423 aa18.75■□□□□ 0.59
CAPN1-219ENST00000530495 GCC1Q96CN9 775 aa18.75■□□□□ 0.59
CAPN1-219ENST00000530495 USP44Q9H0E7 712 aa18.75■□□□□ 0.59
CAPN1-219ENST00000530495 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
CAPN1-219ENST00000530495 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-219ENST00000530495 FGFR2P21802 821 aa18.74■□□□□ 0.59
CAPN1-219ENST00000530495 HHIPL2Q6UWX4 724 aa18.74■□□□□ 0.59
CAPN1-219ENST00000530495 ERO1BQ86YB8 467 aa18.74■□□□□ 0.59
CAPN1-219ENST00000530495 KLHDC4Q8TBB5 520 aa18.74■□□□□ 0.59
CAPN1-219ENST00000530495 HOOK2Q96ED9 719 aa18.74■□□□□ 0.59
CAPN1-219ENST00000530495 TMOD2Q9NZR1 351 aa18.74■□□□□ 0.59
CAPN1-219ENST00000530495 SNCAIPQ9Y6H5 919 aa18.74■□□□□ 0.59
CAPN1-219ENST00000530495 MAST3O60307 1309 aa18.74■□□□□ 0.59
CAPN1-219ENST00000530495 CETPP11597 493 aa18.73■□□□□ 0.59
CAPN1-219ENST00000530495 EN2P19622 333 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-219ENST00000530495 PUM3Q15397 648 aaKnown RBP18.73■□□□□ 0.59
CAPN1-219ENST00000530495 ZCCHC17Q9NP64 241 aaKnown RBP18.73■□□□□ 0.59
CAPN1-219ENST00000530495 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
CAPN1-219ENST00000530495 NBPF11Q86T75 865 aa18.72■□□□□ 0.59
CAPN1-219ENST00000530495 ZKSCAN4Q969J2 545 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-219ENST00000530495 ZNF333Q96JL9 665 aa18.72■□□□□ 0.59
CAPN1-219ENST00000530495 WRNIP1Q96S55 665 aa18.72■□□□□ 0.59
CAPN1-219ENST00000530495 CENPFP49454 3210 aa18.71■□□□□ 0.59
CAPN1-219ENST00000530495 TLR2O60603 784 aa18.71■□□□□ 0.59
CAPN1-219ENST00000530495 WDHD1O75717 1129 aaPredicted RBP18.71■□□□□ 0.59
CAPN1-219ENST00000530495 SSH1Q8WYL5 1049 aa18.71■□□□□ 0.59
CAPN1-219ENST00000530495 TMEM106CQ9BVX2 250 aa18.71■□□□□ 0.59
CAPN1-219ENST00000530495 KIAA0100Q14667 2235 aaKnown RBP18.71■□□□□ 0.59
CAPN1-219ENST00000530495 BTBD19C9JJ37 291 aa18.7■□□□□ 0.58
CAPN1-219ENST00000530495 EYA2O00167 538 aa18.7■□□□□ 0.58
CAPN1-219ENST00000530495 IRF6O14896 467 aa18.7■□□□□ 0.58
CAPN1-219ENST00000530495 RFX5P48382 616 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-219ENST00000530495 PPIL2Q13356 520 aa18.7■□□□□ 0.58
CAPN1-219ENST00000530495 SNAPC2Q13487 334 aa18.7■□□□□ 0.58
CAPN1-219ENST00000530495 SLC9C1Q4G0N8 1177 aa18.7■□□□□ 0.58
CAPN1-219ENST00000530495 DCAF15Q66K64 600 aa18.7■□□□□ 0.58
CAPN1-219ENST00000530495 WDR66Q8TBY9 1149 aa18.7■□□□□ 0.58
CAPN1-219ENST00000530495 PTCH2Q9Y6C5 1203 aa18.7■□□□□ 0.58
CAPN1-219ENST00000530495 RPAP1Q9BWH6 1393 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-219ENST00000530495 MYH13Q9UKX3 1938 aa18.69■□□□□ 0.58
CAPN1-219ENST00000530495 PPATQ06203 517 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms