RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 BEND7Q8N7W2 519 aaPredicted RBP9.62□□□□□ -0.87
VPS26B-205ENST00000530402 KLHL23Q8NBE8 558 aa9.62□□□□□ -0.87
VPS26B-205ENST00000530402 TRIM11Q96F44 468 aa9.62□□□□□ -0.87
VPS26B-205ENST00000530402 SOX17Q9H6I2 414 aaPredicted RBP9.62□□□□□ -0.87
VPS26B-205ENST00000530402 CYP11A1P05108 521 aa9.61□□□□□ -0.87
VPS26B-205ENST00000530402 TRIM28Q13263 835 aaKnown RBP9.61□□□□□ -0.87
VPS26B-205ENST00000530402 AP3B2Q13367 1082 aa9.61□□□□□ -0.87
VPS26B-205ENST00000530402 SUZ12Q15022 739 aaKnown RBP9.61□□□□□ -0.87
VPS26B-205ENST00000530402 PCNX4Q63HM2 1172 aa9.61□□□□□ -0.87
VPS26B-205ENST00000530402 METTL16Q86W50 562 aaKnown RBP9.61□□□□□ -0.87
VPS26B-205ENST00000530402 SULF2Q8IWU5 870 aa9.61□□□□□ -0.87
VPS26B-205ENST00000530402 DCAF11Q8TEB1 546 aa9.61□□□□□ -0.87
VPS26B-205ENST00000530402 KLHDC7BQ96G42 594 aa9.61□□□□□ -0.87
VPS26B-205ENST00000530402 KBTBD4Q9NVX7 518 aa9.61□□□□□ -0.87
VPS26B-205ENST00000530402 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
VPS26B-205ENST00000530402 CNTNAP5Q8WYK1 1306 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 A0A0A0MRY4 1105 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 MINDY4BA8MYZ0 360 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 NME2P22392 152 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 LIG3P49916 1009 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 NLRP12P59046 1061 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 ZNF394Q53GI3 561 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 CORO1BQ9BR76 489 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 RSRP1Q9BUV0 290 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 USP26Q9BXU7 913 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 EMILIN2Q9BXX0 1053 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 COPRSQ9NQ92 184 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 NOP53Q9NZM5 478 aaKnown RBP9.6□□□□□ -0.87
VPS26B-205ENST00000530402 PCDHGB7Q9Y5F8 929 aa9.6□□□□□ -0.87
VPS26B-205ENST00000530402 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
VPS26B-205ENST00000530402 DEAF1O75398 565 aaPredicted RBP9.59□□□□□ -0.87
VPS26B-205ENST00000530402 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
VPS26B-205ENST00000530402 ARNTP27540 789 aa9.59□□□□□ -0.87
VPS26B-205ENST00000530402 CD68P34810 354 aaPredicted RBP9.59□□□□□ -0.87
VPS26B-205ENST00000530402 PRRT3Q5FWE3 981 aa9.59□□□□□ -0.87
VPS26B-205ENST00000530402 ERMP1Q7Z2K6 904 aa9.59□□□□□ -0.87
VPS26B-205ENST00000530402 GALNT11Q8NCW6 608 aa9.59□□□□□ -0.87
VPS26B-205ENST00000530402 CCSER2Q9H7U1 834 aa9.59□□□□□ -0.87
VPS26B-205ENST00000530402 LRRC14Q15048 493 aa9.58□□□□□ -0.88
VPS26B-205ENST00000530402 POU4F3Q15319 338 aa9.58□□□□□ -0.88
VPS26B-205ENST00000530402 FBXO11Q86XK2 927 aa9.58□□□□□ -0.88
VPS26B-205ENST00000530402 FMR1NBQ8N0W7 255 aaPredicted RBP9.58□□□□□ -0.88
VPS26B-205ENST00000530402 TMEM74Q96NL1 305 aa9.58□□□□□ -0.88
VPS26B-205ENST00000530402 ZC3H12CQ9C0D7 883 aaKnown RBP9.58□□□□□ -0.88
VPS26B-205ENST00000530402 TLR6Q9Y2C9 796 aa9.58□□□□□ -0.88
VPS26B-205ENST00000530402 DDX3YO15523 660 aaKnown RBP9.57□□□□□ -0.88
VPS26B-205ENST00000530402 ZNF654Q8IZM8 581 aa9.57□□□□□ -0.88
VPS26B-205ENST00000530402 KCNB2Q92953 911 aa9.57□□□□□ -0.88
VPS26B-205ENST00000530402 SCARF2Q96GP6 870 aaPredicted RBP9.57□□□□□ -0.88
VPS26B-205ENST00000530402 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.57□□□□□ -0.88
VPS26B-205ENST00000530402 FAM181BA6NEQ2 426 aa9.56□□□□□ -0.88
VPS26B-205ENST00000530402 GSTP1P09211 210 aaKnown RBP9.56□□□□□ -0.88
VPS26B-205ENST00000530402 BMP6P22004 513 aa9.56□□□□□ -0.88
VPS26B-205ENST00000530402 MAOBP27338 520 aa9.56□□□□□ -0.88
VPS26B-205ENST00000530402 MAP1SQ66K74 1059 aaPredicted RBP9.56□□□□□ -0.88
VPS26B-205ENST00000530402 DIEXFQ68CQ4 756 aaKnown RBP9.56□□□□□ -0.88
VPS26B-205ENST00000530402 LLGL2Q6P1M3 1020 aa9.56□□□□□ -0.88
VPS26B-205ENST00000530402 ILDR2Q71H61 639 aa9.56□□□□□ -0.88
VPS26B-205ENST00000530402 STK35Q8TDR2 534 aa9.56□□□□□ -0.88
VPS26B-205ENST00000530402 TGIF2Q9GZN2 237 aa9.56□□□□□ -0.88
VPS26B-205ENST00000530402 DDX41Q9UJV9 622 aaKnown RBP9.56□□□□□ -0.88
VPS26B-205ENST00000530402 CYP8B1Q9UNU6 501 aa9.56□□□□□ -0.88
VPS26B-205ENST00000530402 RPS26P62854 115 aaKnown RBP9.55□□□□□ -0.88
VPS26B-205ENST00000530402 PDE3AQ14432 1141 aa9.55□□□□□ -0.88
VPS26B-205ENST00000530402 DUOXA2Q1HG44 320 aa9.55□□□□□ -0.88
VPS26B-205ENST00000530402 FOXD4L6Q3SYB3 417 aaPredicted RBP9.55□□□□□ -0.88
VPS26B-205ENST00000530402 FOXD4L3Q6VB84 417 aaPredicted RBP9.55□□□□□ -0.88
VPS26B-205ENST00000530402 AGMOQ6ZNB7 445 aa9.55□□□□□ -0.88
VPS26B-205ENST00000530402 PHC3Q8NDX5 983 aa9.55□□□□□ -0.88
VPS26B-205ENST00000530402 GRIN3AQ8TCU5 1115 aa9.55□□□□□ -0.88
VPS26B-205ENST00000530402 ELNP15502 786 aa9.54□□□□□ -0.88
VPS26B-205ENST00000530402 RACK1P63244 317 aaKnown RBP9.54□□□□□ -0.88
VPS26B-205ENST00000530402 HNRNPUQ00839 825 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS26B-205ENST00000530402 FAM160A1Q05DH4 1040 aa9.54□□□□□ -0.88
VPS26B-205ENST00000530402 RAD51AP2Q09MP3 1159 aa9.54□□□□□ -0.88
VPS26B-205ENST00000530402 ACSBG1Q96GR2 724 aa9.54□□□□□ -0.88
VPS26B-205ENST00000530402 MIR1-1HGQ9H1L0 117 aa9.54□□□□□ -0.88
VPS26B-205ENST00000530402 KCNK4Q9NYG8 393 aa9.54□□□□□ -0.88
VPS26B-205ENST00000530402 DLL1O00548 723 aa9.53□□□□□ -0.88
VPS26B-205ENST00000530402 ADAM11O75078 769 aa9.53□□□□□ -0.88
VPS26B-205ENST00000530402 PF4P02776 101 aa9.53□□□□□ -0.88
VPS26B-205ENST00000530402 EIF4A3P38919 411 aaKnown RBP9.53□□□□□ -0.88
VPS26B-205ENST00000530402 SNAP47Q5SQN1 464 aa9.53□□□□□ -0.88
VPS26B-205ENST00000530402 HP1BP3Q5SSJ5 553 aaPredicted RBP9.53□□□□□ -0.88
VPS26B-205ENST00000530402 JARID2Q92833 1246 aaPredicted RBP9.53□□□□□ -0.88
VPS26B-205ENST00000530402 ACBD3Q9H3P7 528 aa9.53□□□□□ -0.88
VPS26B-205ENST00000530402 ECEL1O95672 775 aa9.52□□□□□ -0.89
VPS26B-205ENST00000530402 TFE3P19532 575 aaPredicted RBP9.52□□□□□ -0.89
VPS26B-205ENST00000530402 CAMK2GQ13555 558 aaPredicted RBP9.52□□□□□ -0.89
VPS26B-205ENST00000530402 RASIP1Q5U651 963 aa9.52□□□□□ -0.89
VPS26B-205ENST00000530402 UBASH3BQ8TF42 649 aa9.52□□□□□ -0.89
VPS26B-205ENST00000530402 SPON2Q9BUD6 331 aa9.52□□□□□ -0.89
VPS26B-205ENST00000530402 INPP5FQ9Y2H2 1132 aa9.52□□□□□ -0.89
VPS26B-205ENST00000530402 PCDHB5Q9Y5E4 795 aa9.52□□□□□ -0.89
VPS26B-205ENST00000530402 LOC100289279A0A1B0GTE1 492 aa9.51□□□□□ -0.89
VPS26B-205ENST00000530402 ZC3H6P61129 1189 aaKnown RBP9.51□□□□□ -0.89
VPS26B-205ENST00000530402 LMNB2Q03252 620 aa9.51□□□□□ -0.89
VPS26B-205ENST00000530402 GRIK4Q16099 956 aa9.51□□□□□ -0.89
VPS26B-205ENST00000530402 IGF2-ASQ6U949 168 aa9.51□□□□□ -0.89
VPS26B-205ENST00000530402 ACAD11Q709F0 780 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms