RNA–Protein interactions for RNA: ENST00000530330.1

SNX19-208, Transcript of sorting nexin 19, human

TSL 1 (best)

Gene SNX19, Length 880 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX19-208	ENST00000530330		A0A1W2PPZ6	126 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	F11	P03951	625 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	FAM157B	P0CG42	384 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	TARS	P26639	723 aa	Known RBP	7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	CNGA1	P29973	690 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	GRIA4	P48058	902 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	SSRP1	Q08945	709 aa	Known RBP	7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	SQSTM1	Q13501	440 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	LCE2D	Q5TA82	110 aa	Predicted RBP	7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	POTEG	Q6S5H5	508 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	GK5	Q6ZS86	529 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	KRT26	Q7Z3Y9	468 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	LSR	Q86X29	649 aa	Predicted RBP	7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	DHX37	Q8IY37	1157 aa	Known RBP	7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	ZSWIM2	Q8NEG5	633 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	JARID2	Q92833	1246 aa	Predicted RBP	7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	GSX2	Q9BZM3	304 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	ZNF576	Q9H609	170 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	KANSL2	Q9H9L4	492 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	GPAM	Q9HCL2	828 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	TLR7	Q9NYK1	1049 aa	Known RBP	7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	TCEAL9	Q9UHQ7	104 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	LEMD3	Q9Y2U8	911 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330	CC2D2A	Q9P2K1	1620 aa		7.76	□□□□□ -1.17
SNX19-208	ENST00000530330		J3QL48	77 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	MAP3K6	O95382	1288 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	HOXD8	P13378	290 aa	Predicted RBP	7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	NEUROD1	Q13562	356 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	LAMC2	Q13753	1193 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	SEPT6	Q14141	434 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	TMEM102	Q8N9M5	508 aa	Predicted RBP	7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	ASAP3	Q8TDY4	903 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	STAG1	Q8WVM7	1258 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	EMILIN2	Q9BXX0	1053 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	RBSN	Q9H1K0	784 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	RUBCNL	Q9H714	662 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	GEMIN8	Q9NWZ8	242 aa	Known RBP	7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	PKD2L1	Q9P0L9	805 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	SLC12A7	Q9Y666	1083 aa		7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	BAZ1B	Q9UIG0	1483 aa	Known RBP	7.75	□□□□□ -1.17
SNX19-208	ENST00000530330	FAM221A	A4D161	298 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	CILP	O75339	1184 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	GJB6	O95452	261 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	ASMTL	O95671	621 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	MLEC	Q14165	292 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	SCARA3	Q6AZY7	606 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	EEPD1	Q7L9B9	569 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	CEP120	Q8N960	986 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	JMY	Q8N9B5	988 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	FBXO27	Q8NI29	283 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	DDX54	Q8TDD1	881 aa	Known RBP	7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	MORC4	Q8TE76	937 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	CHAC2	Q8WUX2	184 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	CNTNAP3B	Q96NU0	1288 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	CNTNAP3	Q9BZ76	1288 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	BRMS1	Q9HCU9	246 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	DYRK1B	Q9Y463	629 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	PTCH2	Q9Y6C5	1203 aa		7.74	□□□□□ -1.17
SNX19-208	ENST00000530330	HMGXB3	Q12766	1538 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	LOC102724159	A0A0B4J2E5	919 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	TTLL8	A6PVC2	850 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	PDE2A	O00408	941 aa	Predicted RBP	7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	ATXN7	O15265	892 aa	Predicted RBP	7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	CAPN5	O15484	640 aa	Predicted RBP	7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	RHOQ	P17081	205 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	NFKB1	P19838	968 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	NME2	P22392	152 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	EXOSC10	Q01780	885 aa	Known RBP	7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	PWP2	Q15269	919 aa	Known RBP	7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	TMEM67	Q5HYA8	995 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	CT47A1	Q5JQC4	288 aa	Predicted RBP	7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	LLGL2	Q6P1M3	1020 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	FMNL3	Q8IVF7	1028 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	SLC26A8	Q96RN1	970 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	TM9SF2	Q99805	663 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	EHMT1	Q9H9B1	1298 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	PFDN2	Q9UHV9	154 aa		7.73	□□□□□ -1.17
SNX19-208	ENST00000530330	FAM177B	A6PVY3	158 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	PAGE1	O75459	146 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	NRL	P54845	237 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	SCARF1	Q14162	830 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	PCSK7	Q16549	785 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	LONRF2	Q1L5Z9	754 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	SPRED3	Q2MJR0	410 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	TKFC	Q3LXA3	575 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	RELT	Q969Z4	430 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	MFSD3	Q96ES6	412 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	MCM8	Q9UJA3	840 aa		7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	7.72	□□□□□ -1.17
SNX19-208	ENST00000530330	CCDC163	A0A0D9SF12	145 aa		7.71	□□□□□ -1.18
SNX19-208	ENST00000530330	IQCA1L	A6NCM1	817 aa		7.71	□□□□□ -1.18
SNX19-208	ENST00000530330	ALG1L2	C9J202	215 aa		7.71	□□□□□ -1.18
SNX19-208	ENST00000530330	EFS	O43281	561 aa		7.71	□□□□□ -1.18
SNX19-208	ENST00000530330	PRC1	O43663	620 aa		7.71	□□□□□ -1.18
SNX19-208	ENST00000530330	SOX5	P35711	763 aa		7.71	□□□□□ -1.18

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