RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 PHKA1P46020 1223 aa23.33■■□□□ 1.33
PCNX3-203ENST00000530174 HDLBPQ00341 1268 aaKnown RBP23.33■■□□□ 1.33
PCNX3-203ENST00000530174 IFFO2Q5TF58 517 aa23.33■■□□□ 1.33
PCNX3-203ENST00000530174 RASAL3Q86YV0 1011 aa23.33■■□□□ 1.33
PCNX3-203ENST00000530174 WDR66Q8TBY9 1149 aa23.33■■□□□ 1.33
PCNX3-203ENST00000530174 TDRD3Q9H7E2 651 aaKnown RBP23.33■■□□□ 1.33
PCNX3-203ENST00000530174 C1orf115Q9H7X2 142 aa23.33■■□□□ 1.33
PCNX3-203ENST00000530174 PRDM10Q9NQV6 1147 aa23.33■■□□□ 1.33
PCNX3-203ENST00000530174 GNL3LQ9NVN8 582 aaKnown RBP23.33■■□□□ 1.33
PCNX3-203ENST00000530174 ZNF70Q9UC06 446 aaPredicted RBP23.33■■□□□ 1.33
PCNX3-203ENST00000530174 SUGT1Q9Y2Z0 365 aa23.33■■□□□ 1.33
PCNX3-203ENST00000530174 ZBTB7BO15156 539 aaPredicted RBP23.32■■□□□ 1.32
PCNX3-203ENST00000530174 TIMM10P62072 90 aa23.32■■□□□ 1.32
PCNX3-203ENST00000530174 PRKG1Q13976 671 aa23.32■■□□□ 1.32
PCNX3-203ENST00000530174 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.32■■□□□ 1.32
PCNX3-203ENST00000530174 SSC5DA1L4H1 1573 aa23.31■■□□□ 1.32
PCNX3-203ENST00000530174 A0A1B0GUL7 405 aa23.31■■□□□ 1.32
PCNX3-203ENST00000530174 KIF23Q02241 960 aaPredicted RBP23.31■■□□□ 1.32
PCNX3-203ENST00000530174 CCDC102BQ68D86 513 aa23.31■■□□□ 1.32
PCNX3-203ENST00000530174 ARMC9Q7Z3E5 817 aa23.31■■□□□ 1.32
PCNX3-203ENST00000530174 PANK1Q8TE04 598 aa23.31■■□□□ 1.32
PCNX3-203ENST00000530174 TEKT1Q969V4 418 aa23.31■■□□□ 1.32
PCNX3-203ENST00000530174 AKAP2Q9Y2D5 859 aa23.31■■□□□ 1.32
PCNX3-203ENST00000530174 MAST3O60307 1309 aa23.31■■□□□ 1.32
PCNX3-203ENST00000530174 POLA2Q14181 598 aa23.3■■□□□ 1.32
PCNX3-203ENST00000530174 RASA3Q14644 834 aa23.3■■□□□ 1.32
PCNX3-203ENST00000530174 TNS4Q8IZW8 715 aa23.3■■□□□ 1.32
PCNX3-203ENST00000530174 SEMA3EO15041 775 aa23.29■■□□□ 1.32
PCNX3-203ENST00000530174 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
PCNX3-203ENST00000530174 G3BP1Q13283 466 aaKnown RBP eCLIP23.29■■□□□ 1.32
PCNX3-203ENST00000530174 TNFAIP1Q13829 316 aa23.29■■□□□ 1.32
PCNX3-203ENST00000530174 XAGE2Q96GT9 111 aa23.29■■□□□ 1.32
PCNX3-203ENST00000530174 ZDHHC15Q96MV8 337 aa23.29■■□□□ 1.32
PCNX3-203ENST00000530174 MRIQ9BWK5 157 aa23.29■■□□□ 1.32
PCNX3-203ENST00000530174 TSKSQ9UJT2 592 aa23.29■■□□□ 1.32
PCNX3-203ENST00000530174 DENND2AQ9ULE3 1009 aa23.29■■□□□ 1.32
PCNX3-203ENST00000530174 FZD1Q9UP38 647 aa23.29■■□□□ 1.32
PCNX3-203ENST00000530174 CA12O43570 354 aa23.28■■□□□ 1.32
PCNX3-203ENST00000530174 NBPF12Q5TAG4 269 aaPredicted RBP23.28■■□□□ 1.32
PCNX3-203ENST00000530174 SSH3Q8TE77 659 aa23.28■■□□□ 1.32
PCNX3-203ENST00000530174 ANGEL1Q9UNK9 670 aaKnown RBP23.28■■□□□ 1.32
PCNX3-203ENST00000530174 TCP10L2B9ZVM9 353 aa23.27■■□□□ 1.32
PCNX3-203ENST00000530174 ZBTB22O15209 634 aa23.27■■□□□ 1.32
PCNX3-203ENST00000530174 PRDX5P30044 214 aa23.27■■□□□ 1.32
PCNX3-203ENST00000530174 SUPT20HL1Q3ZLR7 823 aa23.27■■□□□ 1.32
PCNX3-203ENST00000530174 NEUROD6Q96NK8 337 aa23.27■■□□□ 1.32
PCNX3-203ENST00000530174 RCAN3Q9UKA8 241 aa23.27■■□□□ 1.32
PCNX3-203ENST00000530174 SALL1Q9NSC2 1324 aa23.27■■□□□ 1.32
PCNX3-203ENST00000530174 RASGRF1Q13972 1273 aa23.26■■□□□ 1.31
PCNX3-203ENST00000530174 MVPQ14764 893 aaKnown RBP23.26■■□□□ 1.31
PCNX3-203ENST00000530174 LDLRAD1Q5T700 205 aa23.26■■□□□ 1.31
PCNX3-203ENST00000530174 APOBEC3HQ6NTF7 200 aaKnown RBP23.26■■□□□ 1.31
PCNX3-203ENST00000530174 HHIPL2Q6UWX4 724 aa23.26■■□□□ 1.31
PCNX3-203ENST00000530174 PPP1R12BO60237 982 aaPredicted RBP23.25■■□□□ 1.31
PCNX3-203ENST00000530174 MS4A1P11836 297 aa23.25■■□□□ 1.31
PCNX3-203ENST00000530174 CACNB3P54284 484 aa23.25■■□□□ 1.31
PCNX3-203ENST00000530174 LDHBP07195 334 aaKnown RBP23.24■■□□□ 1.31
PCNX3-203ENST00000530174 OS9Q13438 667 aaPredicted RBP23.24■■□□□ 1.31
PCNX3-203ENST00000530174 DIXDC1Q155Q3 683 aa23.24■■□□□ 1.31
PCNX3-203ENST00000530174 MAP3K11Q16584 847 aa23.24■■□□□ 1.31
PCNX3-203ENST00000530174 CDAN1Q8IWY9 1227 aa23.24■■□□□ 1.31
PCNX3-203ENST00000530174 TEPSINQ96N21 525 aa23.24■■□□□ 1.31
PCNX3-203ENST00000530174 CSRNP1Q96S65 589 aa23.24■■□□□ 1.31
PCNX3-203ENST00000530174 SURF6O75683 361 aaKnown RBP23.23■■□□□ 1.31
PCNX3-203ENST00000530174 TNNI2P48788 182 aa23.23■■□□□ 1.31
PCNX3-203ENST00000530174 CEP85Q6P2H3 762 aa23.23■■□□□ 1.31
PCNX3-203ENST00000530174 TMEM39BQ9GZU3 492 aa23.23■■□□□ 1.31
PCNX3-203ENST00000530174 TMOD2Q9NZR1 351 aa23.23■■□□□ 1.31
PCNX3-203ENST00000530174 DAGLAQ9Y4D2 1042 aa23.23■■□□□ 1.31
PCNX3-203ENST00000530174 PDS5AQ29RF7 1337 aaKnown RBP23.23■■□□□ 1.31
PCNX3-203ENST00000530174 ZGPATQ8N5A5 531 aaKnown RBP23.22■■□□□ 1.31
PCNX3-203ENST00000530174 USP2O75604 605 aaPredicted RBP23.21■■□□□ 1.31
PCNX3-203ENST00000530174 MKRN3Q13064 507 aaKnown RBP23.21■■□□□ 1.31
PCNX3-203ENST00000530174 GORABQ5T7V8 394 aa23.21■■□□□ 1.31
PCNX3-203ENST00000530174 REM2Q8IYK8 340 aaPredicted RBP23.21■■□□□ 1.31
PCNX3-203ENST00000530174 NOP58Q9Y2X3 529 aaKnown RBP23.21■■□□□ 1.31
PCNX3-203ENST00000530174 AKAP11Q9UKA4 1901 aa23.2■■□□□ 1.3
PCNX3-203ENST00000530174 IREB2P48200 963 aaKnown RBP23.2■■□□□ 1.3
PCNX3-203ENST00000530174 TNNI3KQ59H18 835 aa23.2■■□□□ 1.3
PCNX3-203ENST00000530174 FKBP1CQ5VVH2 108 aa23.2■■□□□ 1.3
PCNX3-203ENST00000530174 CLMNQ96JQ2 1002 aa23.2■■□□□ 1.3
PCNX3-203ENST00000530174 GPR108Q9NPR9 543 aa23.2■■□□□ 1.3
PCNX3-203ENST00000530174 RNF186Q9NXI6 227 aa23.2■■□□□ 1.3
PCNX3-203ENST00000530174 SAGE1Q9NXZ1 904 aa23.2■■□□□ 1.3
PCNX3-203ENST00000530174 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.2■■□□□ 1.3
PCNX3-203ENST00000530174 COG6Q9Y2V7 657 aa23.2■■□□□ 1.3
PCNX3-203ENST00000530174 FPGT-TNNI3KV9GXZ4 949 aa23.2■■□□□ 1.3
PCNX3-203ENST00000530174 ARID4AP29374 1257 aaPredicted RBP23.19■■□□□ 1.3
PCNX3-203ENST00000530174 HMG20BQ9P0W2 317 aa23.19■■□□□ 1.3
PCNX3-203ENST00000530174 ABCF2Q9UG63 623 aa23.19■■□□□ 1.3
PCNX3-203ENST00000530174 TRPA1O75762 1119 aa23.18■■□□□ 1.3
PCNX3-203ENST00000530174 SPRYD7Q5W111 196 aa23.18■■□□□ 1.3
PCNX3-203ENST00000530174 CDC42EP5Q6NZY7 148 aa23.18■■□□□ 1.3
PCNX3-203ENST00000530174 PI16Q6UXB8 463 aa23.18■■□□□ 1.3
PCNX3-203ENST00000530174 FAM83AQ86UY5 434 aa23.18■■□□□ 1.3
PCNX3-203ENST00000530174 SPATA5Q8NB90 893 aa23.18■■□□□ 1.3
PCNX3-203ENST00000530174 SLC10A4Q96EP9 437 aa23.18■■□□□ 1.3
PCNX3-203ENST00000530174 DDX19BQ9UMR2 479 aa23.18■■□□□ 1.3
PCNX3-203ENST00000530174 OTOFQ9HC10 1997 aa23.18■■□□□ 1.3
PCNX3-203ENST00000530174 UNCXA6NJT0 531 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms