RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 SPDYE5A6NIY4 337 aa13.27□□□□□ -0.29
COPB1-207ENST00000529866 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
COPB1-207ENST00000529866 CASP7P55210 303 aa13.27□□□□□ -0.29
COPB1-207ENST00000529866 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.29
COPB1-207ENST00000529866 SNAPC2Q13487 334 aa13.27□□□□□ -0.29
COPB1-207ENST00000529866 DZIP1LQ8IYY4 767 aaKnown RBP13.27□□□□□ -0.29
COPB1-207ENST00000529866 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.29
COPB1-207ENST00000529866 TEPSINQ96N21 525 aa13.27□□□□□ -0.29
COPB1-207ENST00000529866 HTATIP2Q9BUP3 242 aa13.27□□□□□ -0.29
COPB1-207ENST00000529866 TDRD3Q9H7E2 651 aaKnown RBP13.27□□□□□ -0.29
COPB1-207ENST00000529866 RBM27Q9P2N5 1060 aaKnown RBP13.27□□□□□ -0.29
COPB1-207ENST00000529866 FAM205AQ6ZU69 1335 aa13.27□□□□□ -0.29
COPB1-207ENST00000529866 LAMB1P07942 1786 aa13.27□□□□□ -0.29
COPB1-207ENST00000529866 TCP10L2B9ZVM9 353 aa13.26□□□□□ -0.29
COPB1-207ENST00000529866 HOXD10P28358 340 aa13.26□□□□□ -0.29
COPB1-207ENST00000529866 FLIIQ13045 1269 aa13.26□□□□□ -0.29
COPB1-207ENST00000529866 ERO1BQ86YB8 467 aa13.26□□□□□ -0.29
COPB1-207ENST00000529866 HOOK2Q96ED9 719 aa13.26□□□□□ -0.29
COPB1-207ENST00000529866 ARHGAP39Q9C0H5 1083 aa13.26□□□□□ -0.29
COPB1-207ENST00000529866 TMEM39BQ9GZU3 492 aa13.26□□□□□ -0.29
COPB1-207ENST00000529866 MYH3P11055 1940 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 SPEF2Q9C093 1822 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 BTBD19C9JJ37 291 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 CCDC57Q2TAC2 916 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 TWISTNBQ3B726 338 aaPredicted RBP13.25□□□□□ -0.29
COPB1-207ENST00000529866 G2E3Q7L622 706 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 CDAN1Q8IWY9 1227 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 RAET1EQ8TD07 263 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 WRNIP1Q96S55 665 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 CNNM1Q9NRU3 951 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 TMOD2Q9NZR1 351 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 NR2E3Q9Y5X4 410 aa13.25□□□□□ -0.29
COPB1-207ENST00000529866 DLL1O00548 723 aa13.24□□□□□ -0.29
COPB1-207ENST00000529866 PLIN1O60240 522 aa13.24□□□□□ -0.29
COPB1-207ENST00000529866 HIBADHP31937 336 aaKnown RBP13.24□□□□□ -0.29
COPB1-207ENST00000529866 CRKP46108 304 aa13.24□□□□□ -0.29
COPB1-207ENST00000529866 PPIL2Q13356 520 aa13.24□□□□□ -0.29
COPB1-207ENST00000529866 LDHAL6AQ6ZMR3 332 aa13.24□□□□□ -0.29
COPB1-207ENST00000529866 SLC17A8Q8NDX2 589 aa13.24□□□□□ -0.29
COPB1-207ENST00000529866 TSR2Q969E8 191 aaKnown RBP13.24□□□□□ -0.29
COPB1-207ENST00000529866 SHISA4Q96DD7 197 aa13.24□□□□□ -0.29
COPB1-207ENST00000529866 SRRDQ9UH36 339 aa13.24□□□□□ -0.29
COPB1-207ENST00000529866 IRF6O14896 467 aa13.23□□□□□ -0.29
COPB1-207ENST00000529866 GRK4P32298 578 aa13.23□□□□□ -0.29
COPB1-207ENST00000529866 UBE4AQ14139 1066 aa13.23□□□□□ -0.29
COPB1-207ENST00000529866 MTFR1Q15390 333 aa13.23□□□□□ -0.29
COPB1-207ENST00000529866 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
COPB1-207ENST00000529866 TDRD7Q8NHU6 1098 aaKnown RBP13.23□□□□□ -0.29
COPB1-207ENST00000529866 SNCAIPQ9Y6H5 919 aa13.23□□□□□ -0.29
COPB1-207ENST00000529866 A0A1W2PPC1 479 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 FMNL1O95466 1100 aaPredicted RBP13.22□□□□□ -0.29
COPB1-207ENST00000529866 GJB1P08034 283 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 PSMC4P43686 418 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 GJA8P48165 433 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 UBXN2AP68543 259 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 FOXO4P98177 505 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 DCAF15Q66K64 600 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 LMBR1LQ6UX01 489 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 C17orf99Q6UX52 265 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 VPS37DQ86XT2 251 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 TBC1D22AQ8WUA7 517 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 BIN2Q9UBW5 565 aaPredicted RBP13.22□□□□□ -0.29
COPB1-207ENST00000529866 RIPOR2Q9Y4F9 1068 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 A0A0C4DFX4 3053 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 ECM29Q5VYK3 1845 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 LAMA3Q16787 3333 aa13.22□□□□□ -0.29
COPB1-207ENST00000529866 MYPNQ86TC9 1320 aa13.21□□□□□ -0.29
COPB1-207ENST00000529866 GYG1P46976 350 aa13.21□□□□□ -0.29
COPB1-207ENST00000529866 HDLBPQ00341 1268 aaKnown RBP13.21□□□□□ -0.29
COPB1-207ENST00000529866 PPATQ06203 517 aa13.21□□□□□ -0.29
COPB1-207ENST00000529866 TEKT1Q969V4 418 aa13.21□□□□□ -0.29
COPB1-207ENST00000529866 RNF208Q9H0X6 261 aa13.21□□□□□ -0.29
COPB1-207ENST00000529866 CPA4Q9UI42 421 aa13.21□□□□□ -0.29
COPB1-207ENST00000529866 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
COPB1-207ENST00000529866 FRAT2O75474 233 aaPredicted RBP13.2□□□□□ -0.3
COPB1-207ENST00000529866 ECM2O94769 699 aaPredicted RBP13.2□□□□□ -0.3
COPB1-207ENST00000529866 FARP2O94887 1054 aaPredicted RBP13.2□□□□□ -0.3
COPB1-207ENST00000529866 CCL5P13501 91 aa13.2□□□□□ -0.3
COPB1-207ENST00000529866 OSBPP22059 807 aa13.2□□□□□ -0.3
COPB1-207ENST00000529866 FKBP1CQ5VVH2 108 aa13.2□□□□□ -0.3
COPB1-207ENST00000529866 UBE2Q1Q7Z7E8 422 aa13.2□□□□□ -0.3
COPB1-207ENST00000529866 ANKRD23Q86SG2 305 aa13.2□□□□□ -0.3
COPB1-207ENST00000529866 FAM83AQ86UY5 434 aa13.2□□□□□ -0.3
COPB1-207ENST00000529866 ZKSCAN4Q969J2 545 aaPredicted RBP13.2□□□□□ -0.3
COPB1-207ENST00000529866 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
COPB1-207ENST00000529866 PRO3102Q9H379 93 aa13.2□□□□□ -0.3
COPB1-207ENST00000529866 RPAP1Q9BWH6 1393 aaPredicted RBP13.2□□□□□ -0.3
COPB1-207ENST00000529866 MAST3O60307 1309 aa13.19□□□□□ -0.3
COPB1-207ENST00000529866 PDHXO00330 501 aa13.19□□□□□ -0.3
COPB1-207ENST00000529866 ZBTB7BO15156 539 aaPredicted RBP13.19□□□□□ -0.3
COPB1-207ENST00000529866 CACNB3P54284 484 aa13.19□□□□□ -0.3
COPB1-207ENST00000529866 FCGRTP55899 365 aa13.19□□□□□ -0.3
COPB1-207ENST00000529866 CHAF1AQ13111 956 aaPredicted RBP13.19□□□□□ -0.3
COPB1-207ENST00000529866 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.19□□□□□ -0.3
COPB1-207ENST00000529866 SLAIN1Q8ND83 568 aa13.19□□□□□ -0.3
COPB1-207ENST00000529866 ZNF594Q96JF6 807 aaPredicted RBP13.19□□□□□ -0.3
COPB1-207ENST00000529866 FAM84BQ96KN1 310 aaPredicted RBP13.19□□□□□ -0.3
COPB1-207ENST00000529866 ZNF341Q9BYN7 854 aa13.19□□□□□ -0.3
COPB1-207ENST00000529866 GRM8O00222 908 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms