RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 NEDD1Q8NHV4 660 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 WHAMMQ8TF30 809 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 TINF2Q9BSI4 451 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 SPON2Q9BUD6 331 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 EMILIN2Q9BXX0 1053 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 CBX8Q9HC52 389 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 ENAMQ9NRM1 1142 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 TLR6Q9Y2C9 796 aa6.22□□□□□ -1.41
SVIP-203ENST00000529848 EIF4A3P38919 411 aaKnown RBP6.21□□□□□ -1.42
SVIP-203ENST00000529848 BAG6P46379 1132 aa6.21□□□□□ -1.42
SVIP-203ENST00000529848 C19orf57Q0VDD7 668 aa6.21□□□□□ -1.42
SVIP-203ENST00000529848 AP3B2Q13367 1082 aa6.21□□□□□ -1.42
SVIP-203ENST00000529848 SNAP47Q5SQN1 464 aa6.21□□□□□ -1.42
SVIP-203ENST00000529848 AGMOQ6ZNB7 445 aa6.21□□□□□ -1.42
SVIP-203ENST00000529848 VPS37DQ86XT2 251 aa6.21□□□□□ -1.42
SVIP-203ENST00000529848 WNT8BQ93098 351 aa6.21□□□□□ -1.42
SVIP-203ENST00000529848 SOX17Q9H6I2 414 aaPredicted RBP6.21□□□□□ -1.42
SVIP-203ENST00000529848 RRAGCQ9HB90 399 aa6.21□□□□□ -1.42
SVIP-203ENST00000529848 OSGEPQ9NPF4 335 aa6.21□□□□□ -1.42
SVIP-203ENST00000529848 PRDM6Q9NQX0 595 aa6.21□□□□□ -1.42
SVIP-203ENST00000529848 PF4P02776 101 aa6.2□□□□□ -1.42
SVIP-203ENST00000529848 FAM160A1Q05DH4 1040 aa6.2□□□□□ -1.42
SVIP-203ENST00000529848 PAK2Q13177 524 aa6.2□□□□□ -1.42
SVIP-203ENST00000529848 DMRTC2Q8IXT2 367 aaPredicted RBP6.2□□□□□ -1.42
SVIP-203ENST00000529848 SVOPQ8N4V2 548 aa6.2□□□□□ -1.42
SVIP-203ENST00000529848 SLC43A3Q8NBI5 491 aa6.2□□□□□ -1.42
SVIP-203ENST00000529848 RHOVQ96L33 236 aa6.2□□□□□ -1.42
SVIP-203ENST00000529848 DRC1Q96MC2 740 aa6.2□□□□□ -1.42
SVIP-203ENST00000529848 CYP8B1Q9UNU6 501 aa6.2□□□□□ -1.42
SVIP-203ENST00000529848 SUPT16HQ9Y5B9 1047 aaKnown RBP6.2□□□□□ -1.42
SVIP-203ENST00000529848 FSCN2O14926 492 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 CYP11A1P05108 521 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 TFE3P19532 575 aaPredicted RBP6.19□□□□□ -1.42
SVIP-203ENST00000529848 BMP6P22004 513 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 ARNTP27540 789 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 DNAJA1P31689 397 aaKnown RBP6.19□□□□□ -1.42
SVIP-203ENST00000529848 LMNB2Q03252 620 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 CAMK2GQ13555 558 aaPredicted RBP6.19□□□□□ -1.42
SVIP-203ENST00000529848 LLGL2Q6P1M3 1020 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 MAP4K3Q8IVH8 894 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 GOLM1Q8NBJ4 401 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 ZNF296Q8WUU4 475 aaPredicted RBP6.19□□□□□ -1.42
SVIP-203ENST00000529848 GPRASP2Q96D09 838 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 CARD10Q9BWT7 1032 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 TANGO6Q9C0B7 1094 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 MIR1-1HGQ9H1L0 117 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 ADAMTS1Q9UHI8 967 aa6.19□□□□□ -1.42
SVIP-203ENST00000529848 IGSF3O75054 1194 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 NID1P14543 1247 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 DGKGP49619 791 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 HNRNPUQ00839 825 aaKnown RBP eCLIP6.18□□□□□ -1.42
SVIP-203ENST00000529848 ARID5AQ03989 594 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 TRAPPC3LQ5T215 181 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 ZNF385CQ66K41 422 aaPredicted RBP6.18□□□□□ -1.42
SVIP-203ENST00000529848 HGSNATQ68CP4 663 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 TRIM42Q8IWZ5 723 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 KLHL23Q8NBE8 558 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 DCAF11Q8TEB1 546 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 KCNB2Q92953 911 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 SPATA32Q96LK8 384 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 CORO1BQ9BR76 489 aa6.18□□□□□ -1.42
SVIP-203ENST00000529848 PPP1R1BQ9UD71 204 aaPredicted RBP6.18□□□□□ -1.42
SVIP-203ENST00000529848 GSTP1P09211 210 aaKnown RBP6.17□□□□□ -1.42
SVIP-203ENST00000529848 GJA8P48165 433 aa6.17□□□□□ -1.42
SVIP-203ENST00000529848 SUZ12Q15022 739 aaKnown RBP6.17□□□□□ -1.42
SVIP-203ENST00000529848 POU4F3Q15319 338 aa6.17□□□□□ -1.42
SVIP-203ENST00000529848 FBXL19Q6PCT2 694 aa6.17□□□□□ -1.42
SVIP-203ENST00000529848 ZSCAN1Q8NBB4 408 aa6.17□□□□□ -1.42
SVIP-203ENST00000529848 GRIN3AQ8TCU5 1115 aa6.17□□□□□ -1.42
SVIP-203ENST00000529848 STK35Q8TDR2 534 aa6.17□□□□□ -1.42
SVIP-203ENST00000529848 JARID2Q92833 1246 aaPredicted RBP6.17□□□□□ -1.42
SVIP-203ENST00000529848 NT5C1AQ9BXI3 368 aa6.17□□□□□ -1.42
SVIP-203ENST00000529848 PCDHB5Q9Y5E4 795 aa6.17□□□□□ -1.42
SVIP-203ENST00000529848 PIK3R2O00459 728 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 GARTP22102 1010 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 SEPT6Q14141 434 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 SETDB1Q15047 1291 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 HP1BP3Q5SSJ5 553 aaPredicted RBP6.16□□□□□ -1.42
SVIP-203ENST00000529848 RASIP1Q5U651 963 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 MAP1SQ66K74 1059 aaPredicted RBP6.16□□□□□ -1.42
SVIP-203ENST00000529848 CCDC84Q86UT8 332 aaPredicted RBP6.16□□□□□ -1.42
SVIP-203ENST00000529848 DTWD1Q8N5C7 304 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 RASGRP4Q8TDF6 673 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 KLHDC7BQ96G42 594 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 ACSBG1Q96GR2 724 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 EAF1Q96JC9 268 aaPredicted RBP6.16□□□□□ -1.42
SVIP-203ENST00000529848 USP26Q9BXU7 913 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 ZC3H12CQ9C0D7 883 aaKnown RBP6.16□□□□□ -1.42
SVIP-203ENST00000529848 KCNQ5Q9NR82 932 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 PRKAG2Q9UGJ0 569 aa6.16□□□□□ -1.42
SVIP-203ENST00000529848 SPDYE3A6NKU9 549 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 GREM1O60565 184 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 TRIM37O94972 964 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 BPNT1O95861 308 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 ATP2B1P20020 1258 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 MAOBP27338 520 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 NLRP12P59046 1061 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 RAC1P63000 192 aa6.15□□□□□ -1.42
SVIP-203ENST00000529848 INSM1Q01101 510 aaPredicted RBP6.15□□□□□ -1.42
SVIP-203ENST00000529848 ZNF252P-AS1Q0IIN9 211 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms