RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 ZKSCAN5Q9Y2L8 839 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 DCAF17Q5H9S7 520 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-220ENST00000529526 USP37Q86T82 979 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 SELENOSQ9BQE4 189 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 PARP3Q9Y6F1 533 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 PCDH11XQ9BZA7 1347 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 PCDH11YQ9BZA8 1340 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 BICDL2A1A5D9 508 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 PARP1P09874 1014 aaKnown RBP9.19□□□□□ -0.94
CTNND1-220ENST00000529526 ITGA6P23229 1130 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 RPS6KB1P23443 525 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 KIF5AQ12840 1032 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 GOLGA1Q92805 767 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 RSPH14Q9UHP6 348 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 ZFYVE9O95405 1425 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 SLC27A2O14975 620 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 KRT83P78385 493 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 LETM2Q2VYF4 491 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 NCOA5Q9HCD5 579 aaKnown RBP9.19□□□□□ -0.94
CTNND1-220ENST00000529526 HELLSQ9NRZ9 838 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 ZNF518AQ6AHZ1 1483 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 MAP3K19Q56UN5 1328 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 A0A1B0GUL7 405 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 BRAPQ7Z569 592 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 IFT81Q8WYA0 676 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 PLVAPQ9BX97 442 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 GNPATO15228 680 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 SLU7O95391 586 aaKnown RBP9.18□□□□□ -0.94
CTNND1-220ENST00000529526 RAPGEF1Q13905 1077 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 TNNI3KQ59H18 835 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 IPO4Q8TEX9 1081 aaKnown RBP9.18□□□□□ -0.94
CTNND1-220ENST00000529526 FPGT-TNNI3KV9GXZ4 949 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 KRT86O43790 486 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.18□□□□□ -0.94
CTNND1-220ENST00000529526 OTUD6BQ8N6M0 293 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 GPATCH11Q8N954 259 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 FAM227BQ96M60 508 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 PPP1R9BQ96SB3 815 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 RBM28Q9NW13 759 aaKnown RBP9.18□□□□□ -0.94
CTNND1-220ENST00000529526 KIF4AO95239 1232 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 FERP16591 822 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 DNAJC21Q5F1R6 531 aaKnown RBP9.18□□□□□ -0.94
CTNND1-220ENST00000529526 IMPG2Q9BZV3 1241 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 ANKRD2Q9GZV1 360 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 PIK3C2GO75747 1445 aa9.18□□□□□ -0.94
CTNND1-220ENST00000529526 CHMP2AO43633 222 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 CLCN1P35523 988 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 GRIPAP1Q4V328 841 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 ATRIPQ8WXE1 791 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 IP6K1Q92551 441 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 UIMC1Q96RL1 719 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 IQCGQ9H095 443 aaKnown RBP9.17□□□□□ -0.94
CTNND1-220ENST00000529526 BTG4Q9NY30 223 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 CTTNBP2Q8WZ74 1663 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 GNA11P29992 359 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 PLCB3Q01970 1234 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 PIK3AP1Q6ZUJ8 805 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 PUS7Q96PZ0 661 aaKnown RBP9.17□□□□□ -0.94
CTNND1-220ENST00000529526 DBNDD2Q9BQY9 259 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 RAD50Q92878 1312 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 PLCG2P16885 1265 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 ARL1P40616 181 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-220ENST00000529526 HSPA2P54652 639 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 MXRA7P84157 204 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 TRAF1Q13077 416 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 XAGE2Q96GT9 111 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 SNX14Q9Y5W7 946 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 CTDSPL2Q05D32 466 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 CCDC63Q8NA47 563 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 PABPN1LA6NDY0 278 aaKnown RBP9.17□□□□□ -0.94
CTNND1-220ENST00000529526 TAF5LO75529 589 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 KCNA6P17658 529 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 OTUD7BQ6GQQ9 843 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 LMBR1Q8WVP7 490 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 LGR6Q9HBX8 967 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 VPS18Q9P253 973 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 MAPK8IP1Q9UQF2 711 aa9.17□□□□□ -0.94
CTNND1-220ENST00000529526 ELP1O95163 1332 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 CCNT1O60563 726 aaKnown RBP9.16□□□□□ -0.94
CTNND1-220ENST00000529526 FAM173BQ6P4H8 233 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 CCDC25Q86WR0 208 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 INTS4Q96HW7 963 aaKnown RBP9.16□□□□□ -0.94
CTNND1-220ENST00000529526 RBM17Q96I25 401 aaKnown RBP9.16□□□□□ -0.94
CTNND1-220ENST00000529526 YTHDC2Q9H6S0 1430 aaKnown RBP9.16□□□□□ -0.94
CTNND1-220ENST00000529526 UFL1O94874 794 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 PRPHP41219 470 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 GPIHBP1Q8IV16 184 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 TEX11Q8IYF3 940 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 IQUBQ8NA54 791 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 MYL10Q9BUA6 226 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 DENND2AQ9ULE3 1009 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 ZNF790Q6PG37 636 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 SV2BQ7L1I2 683 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 CCDC24Q8N4L8 307 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 METTL22Q9BUU2 404 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-220ENST00000529526 DDX21Q9NR30 783 aaKnown RBP eCLIP9.16□□□□□ -0.944e-6■□□□□ 11.2
CTNND1-220ENST00000529526 OPA1O60313 960 aa9.16□□□□□ -0.94
CTNND1-220ENST00000529526 TOM1O60784 492 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms