RNA–Protein interactions for RNA: ENST00000528773.1

SUSD1-208, Transcript of sushi domain containing 1, humanhuman

TSL 4

Gene SUSD1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-208ENST00000528773 TPTE2Q6XPS3 522 aa6.78□□□□□ -1.32
SUSD1-208ENST00000528773 NBPF5PQ86XG9 351 aaPredicted RBP6.78□□□□□ -1.32
SUSD1-208ENST00000528773 TTC5Q8N0Z6 440 aa6.78□□□□□ -1.32
SUSD1-208ENST00000528773 NBPF15Q8N660 670 aa6.78□□□□□ -1.32
SUSD1-208ENST00000528773 FMNL2Q96PY5 1086 aa6.78□□□□□ -1.32
SUSD1-208ENST00000528773 BEGAINQ9BUH8 593 aa6.78□□□□□ -1.32
SUSD1-208ENST00000528773 UNC93B1Q9H1C4 597 aa6.78□□□□□ -1.32
SUSD1-208ENST00000528773 KIF7Q2M1P5 1343 aa6.77□□□□□ -1.32
SUSD1-208ENST00000528773 COL6A3P12111 3177 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 PRAMEF22A3QJZ6 481 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 GNAT3A8MTJ3 354 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 PER1O15534 1290 aaPredicted RBP6.77□□□□□ -1.33
SUSD1-208ENST00000528773 PRPF38BQ5VTL8 546 aaKnown RBP6.77□□□□□ -1.33
SUSD1-208ENST00000528773 SLC51AQ86UW1 340 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 MEIOBQ8N635 442 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 ZNF511Q8NB15 262 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 GALNT6Q8NCL4 622 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 KCNV2Q8TDN2 545 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 ZC3H15Q8WU90 426 aaKnown RBP6.77□□□□□ -1.33
SUSD1-208ENST00000528773 JDP2Q8WYK2 163 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 ZIC5Q96T25 663 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 GPRC5DQ9NZD1 345 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 ABCC12Q96J65 1359 aa6.77□□□□□ -1.33
SUSD1-208ENST00000528773 FAM155AB1AL88 458 aaPredicted RBP6.76□□□□□ -1.33
SUSD1-208ENST00000528773 HOXA2O43364 376 aa6.76□□□□□ -1.33
SUSD1-208ENST00000528773 HIRAP54198 1017 aaPredicted RBP6.76□□□□□ -1.33
SUSD1-208ENST00000528773 EIF6P56537 245 aaKnown RBP6.76□□□□□ -1.33
SUSD1-208ENST00000528773 DGKZQ13574 1117 aa6.76□□□□□ -1.33
SUSD1-208ENST00000528773 HLFQ16534 295 aa6.76□□□□□ -1.33
SUSD1-208ENST00000528773 CIAPIN1Q6FI81 312 aa6.76□□□□□ -1.33
SUSD1-208ENST00000528773 VWA5B2Q8N398 1253 aa6.76□□□□□ -1.33
SUSD1-208ENST00000528773 CCDC155Q8N6L0 562 aa6.76□□□□□ -1.33
SUSD1-208ENST00000528773 SPRYD3Q8NCJ5 442 aa6.76□□□□□ -1.33
SUSD1-208ENST00000528773 RTFDC1Q9BY42 306 aaPredicted RBP6.76□□□□□ -1.33
SUSD1-208ENST00000528773 VPS33BQ9H267 617 aa6.76□□□□□ -1.33
SUSD1-208ENST00000528773 ADARB2Q9NS39 739 aaKnown RBP6.76□□□□□ -1.33
SUSD1-208ENST00000528773 NIP7Q9Y221 180 aaKnown RBP eCLIP6.76□□□□□ -1.33
SUSD1-208ENST00000528773 ZNF652Q9Y2D9 606 aa6.76□□□□□ -1.33
SUSD1-208ENST00000528773 IBTKQ9P2D0 1353 aaPredicted RBP6.76□□□□□ -1.33
SUSD1-208ENST00000528773 CDHR2Q9BYE9 1310 aa6.76□□□□□ -1.33
SUSD1-208ENST00000528773 NPC1L1Q9UHC9 1359 aa6.75□□□□□ -1.33
SUSD1-208ENST00000528773 DIAPH1O60610 1272 aaKnown RBP6.75□□□□□ -1.33
SUSD1-208ENST00000528773 CELF2O95319 508 aaKnown RBP6.75□□□□□ -1.33
SUSD1-208ENST00000528773 CELA2BP08218 269 aaPredicted RBP6.75□□□□□ -1.33
SUSD1-208ENST00000528773 FURINP09958 794 aa6.75□□□□□ -1.33
SUSD1-208ENST00000528773 CCNYL3P0C7X3 344 aa6.75□□□□□ -1.33
SUSD1-208ENST00000528773 LMOD1P29536 600 aaPredicted RBP6.75□□□□□ -1.33
SUSD1-208ENST00000528773 PIP4K2AP48426 406 aaPredicted RBP6.75□□□□□ -1.33
SUSD1-208ENST00000528773 CXCL9Q07325 125 aa6.75□□□□□ -1.33
SUSD1-208ENST00000528773 TEFQ10587 303 aa6.75□□□□□ -1.33
SUSD1-208ENST00000528773 NOGQ13253 232 aa6.75□□□□□ -1.33
SUSD1-208ENST00000528773 GAS2L2Q8NHY3 880 aa6.75□□□□□ -1.33
SUSD1-208ENST00000528773 CRAMP1Q96RY5 1269 aa6.75□□□□□ -1.33
SUSD1-208ENST00000528773 GLIS2Q9BZE0 524 aaPredicted RBP6.75□□□□□ -1.33
SUSD1-208ENST00000528773 SAGE1Q9NXZ1 904 aa6.75□□□□□ -1.33
SUSD1-208ENST00000528773 ZNF330Q9Y3S2 320 aaPredicted RBP6.75□□□□□ -1.33
SUSD1-208ENST00000528773 GJA3Q9Y6H8 435 aa6.75□□□□□ -1.33
SUSD1-208ENST00000528773 BTBD11A6QL63 1104 aa6.74□□□□□ -1.33
SUSD1-208ENST00000528773 ERVV-1B6SEH8 477 aa6.74□□□□□ -1.33
SUSD1-208ENST00000528773 SNRPA1P09661 255 aaKnown RBP6.74□□□□□ -1.33
SUSD1-208ENST00000528773 HSPA5P11021 654 aaKnown RBP6.74□□□□□ -1.33
SUSD1-208ENST00000528773 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.74□□□□□ -1.33
SUSD1-208ENST00000528773 LARGE2Q8N3Y3 721 aa6.74□□□□□ -1.33
SUSD1-208ENST00000528773 PHACTR3Q96KR7 559 aa6.74□□□□□ -1.33
SUSD1-208ENST00000528773 CDK15Q96Q40 435 aa6.74□□□□□ -1.33
SUSD1-208ENST00000528773 KNSTRNQ9Y448 316 aa6.74□□□□□ -1.33
SUSD1-208ENST00000528773 TRIOBPQ9H2D6 2365 aa6.73□□□□□ -1.33
SUSD1-208ENST00000528773 FIGNL2A6NMB9 653 aa6.73□□□□□ -1.33
SUSD1-208ENST00000528773 NPHP1O15259 732 aa6.73□□□□□ -1.33
SUSD1-208ENST00000528773 GMPSP49915 693 aaPredicted RBP6.73□□□□□ -1.33
SUSD1-208ENST00000528773 GRM1Q13255 1194 aa6.73□□□□□ -1.33
SUSD1-208ENST00000528773 PAXIP1Q6ZW49 1069 aaPredicted RBP6.73□□□□□ -1.33
SUSD1-208ENST00000528773 CDC37L1Q7L3B6 337 aa6.73□□□□□ -1.33
SUSD1-208ENST00000528773 EVA1BQ9NVM1 165 aa6.73□□□□□ -1.33
SUSD1-208ENST00000528773 ZNRF3Q9ULT6 936 aa6.73□□□□□ -1.33
SUSD1-208ENST00000528773 ATP6V0A2Q9Y487 856 aa6.73□□□□□ -1.33
SUSD1-208ENST00000528773 NUP98P52948 1817 aa6.73□□□□□ -1.33
SUSD1-208ENST00000528773 UBN2Q6ZU65 1347 aa6.73□□□□□ -1.33
SUSD1-208ENST00000528773 KIAA0100Q14667 2235 aaKnown RBP6.72□□□□□ -1.33
SUSD1-208ENST00000528773 SLC35F4A4IF30 521 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 SEMA3EO15041 775 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 NTSR2O95665 410 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 GRM5P41594 1212 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 SOX10P56693 466 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 EIF4G2P78344 907 aaKnown RBP eCLIP6.72□□□□□ -1.33
SUSD1-208ENST00000528773 KIAA2012Q0VF49 1180 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 AOC3Q16853 763 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 SLC10A5Q5PT55 438 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 RBM26Q5T8P6 1007 aaKnown RBP6.72□□□□□ -1.33
SUSD1-208ENST00000528773 NPM2Q86SE8 214 aaKnown RBP6.72□□□□□ -1.33
SUSD1-208ENST00000528773 RETREG3Q86VR2 466 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 NUTM1Q86Y26 1132 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 ZNF34Q8IZ26 560 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 TRPM4Q8TD43 1214 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 NYXQ9GZU5 481 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 RSPH6AQ9H0K4 717 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 RNF186Q9NXI6 227 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 DUOX1Q9NRD9 1551 aa6.72□□□□□ -1.33
SUSD1-208ENST00000528773 SHTN1A0MZ66 631 aa6.71□□□□□ -1.34
SUSD1-208ENST00000528773 CDC14CA4D256 554 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms