RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 CASP7P55210 303 aa14.04□□□□□ -0.16
USF1-208ENST00000528768 FKBP1BP68106 108 aa14.04□□□□□ -0.16
USF1-208ENST00000528768 TCIRG1Q13488 830 aa14.04□□□□□ -0.16
USF1-208ENST00000528768 NOM1Q5C9Z4 860 aaKnown RBP14.04□□□□□ -0.16
USF1-208ENST00000528768 SUSD4Q5VX71 490 aa14.04□□□□□ -0.16
USF1-208ENST00000528768 TTLL7Q6ZT98 887 aa14.04□□□□□ -0.16
USF1-208ENST00000528768 ZBTB3Q9H5J0 574 aa14.04□□□□□ -0.16
USF1-208ENST00000528768 PALD1Q9ULE6 856 aa14.04□□□□□ -0.16
USF1-208ENST00000528768 SNX14Q9Y5W7 946 aa14.04□□□□□ -0.16
USF1-208ENST00000528768 BAG4O95429 457 aaKnown RBP14.03□□□□□ -0.16
USF1-208ENST00000528768 PDIA4P13667 645 aaKnown RBP14.03□□□□□ -0.16
USF1-208ENST00000528768 FOXO4P98177 505 aa14.03□□□□□ -0.16
USF1-208ENST00000528768 TFCP2Q12800 502 aa14.03□□□□□ -0.16
USF1-208ENST00000528768 HABP4Q5JVS0 413 aaKnown RBP14.03□□□□□ -0.16
USF1-208ENST00000528768 GIGYF2Q6Y7W6 1299 aaKnown RBP14.03□□□□□ -0.16
USF1-208ENST00000528768 ISCA1Q9BUE6 129 aa14.03□□□□□ -0.16
USF1-208ENST00000528768 BOLA2Q9H3K6 86 aa14.03□□□□□ -0.16
USF1-208ENST00000528768 SNRKQ9NRH2 765 aa14.03□□□□□ -0.16
USF1-208ENST00000528768 HMG20BQ9P0W2 317 aa14.03□□□□□ -0.16
USF1-208ENST00000528768 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.03□□□□□ -0.16
USF1-208ENST00000528768 CCDC171Q6TFL3 1326 aa14.03□□□□□ -0.16
USF1-208ENST00000528768 UBN2Q6ZU65 1347 aa14.03□□□□□ -0.16
USF1-208ENST00000528768 CYP2E1P05181 493 aaPredicted RBP14.02□□□□□ -0.17
USF1-208ENST00000528768 GPTP24298 496 aa14.02□□□□□ -0.17
USF1-208ENST00000528768 ANKRD1Q15327 319 aa14.02□□□□□ -0.17
USF1-208ENST00000528768 CCDC57Q2TAC2 916 aa14.02□□□□□ -0.17
USF1-208ENST00000528768 SULF1Q8IWU6 871 aa14.02□□□□□ -0.17
USF1-208ENST00000528768 KCNB2Q92953 911 aa14.02□□□□□ -0.17
USF1-208ENST00000528768 LIMCH1Q9UPQ0 1083 aa14.02□□□□□ -0.17
USF1-208ENST00000528768 AKAP2Q9Y2D5 859 aa14.02□□□□□ -0.17
USF1-208ENST00000528768 CYP46A1Q9Y6A2 500 aa14.02□□□□□ -0.17
USF1-208ENST00000528768 EYA2O00167 538 aa14.01□□□□□ -0.17
USF1-208ENST00000528768 PCCAP05165 728 aaPredicted RBP14.01□□□□□ -0.17
USF1-208ENST00000528768 NMIQ13287 307 aaPredicted RBP14.01□□□□□ -0.17
USF1-208ENST00000528768 KRT32Q14532 448 aa14.01□□□□□ -0.17
USF1-208ENST00000528768 TAF7LQ5H9L4 462 aa14.01□□□□□ -0.17
USF1-208ENST00000528768 VPS53Q5VIR6 699 aa14.01□□□□□ -0.17
USF1-208ENST00000528768 FBXO46Q6PJ61 603 aaPredicted RBP14.01□□□□□ -0.17
USF1-208ENST00000528768 DDX46Q7L014 1031 aaKnown RBP14.01□□□□□ -0.17
USF1-208ENST00000528768 KLHDC4Q8TBB5 520 aa14.01□□□□□ -0.17
USF1-208ENST00000528768 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
USF1-208ENST00000528768 SH2B1Q9NRF2 756 aaPredicted RBP14.01□□□□□ -0.17
USF1-208ENST00000528768 SAMD7Q7Z3H4 446 aa14□□□□□ -0.17
USF1-208ENST00000528768 JARID2Q92833 1246 aaPredicted RBP14□□□□□ -0.17
USF1-208ENST00000528768 HAUS7Q99871 368 aa14□□□□□ -0.17
USF1-208ENST00000528768 PLA2G12BQ9BX93 195 aa14□□□□□ -0.17
USF1-208ENST00000528768 UPF3BQ9BZI7 483 aaKnown RBP14□□□□□ -0.17
USF1-208ENST00000528768 PDRG1Q9NUG6 133 aa14□□□□□ -0.17
USF1-208ENST00000528768 CEP126Q9P2H0 1117 aa14□□□□□ -0.17
USF1-208ENST00000528768 YDJCA8MPS7 323 aa13.99□□□□□ -0.17
USF1-208ENST00000528768 MRE11P49959 708 aa13.99□□□□□ -0.17
USF1-208ENST00000528768 GRAPQ13588 217 aa13.99□□□□□ -0.17
USF1-208ENST00000528768 KLHL40Q2TBA0 621 aa13.99□□□□□ -0.17
USF1-208ENST00000528768 TBC1D10BQ4KMP7 808 aaPredicted RBP13.99□□□□□ -0.17
USF1-208ENST00000528768 MCTP1Q6DN14 999 aa13.99□□□□□ -0.17
USF1-208ENST00000528768 C3orf67Q6ZVT6 689 aa13.99□□□□□ -0.17
USF1-208ENST00000528768 RASAL3Q86YV0 1011 aa13.99□□□□□ -0.17
USF1-208ENST00000528768 ZGPATQ8N5A5 531 aaKnown RBP13.99□□□□□ -0.17
USF1-208ENST00000528768 ZBTB38Q8NAP3 1195 aaPredicted RBP13.99□□□□□ -0.17
USF1-208ENST00000528768 GRAPLQ8TC17 118 aaPredicted RBP13.99□□□□□ -0.17
USF1-208ENST00000528768 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.99□□□□□ -0.17
USF1-208ENST00000528768 MAP4K1Q92918 833 aa13.99□□□□□ -0.17
USF1-208ENST00000528768 JAKMIP1Q96N16 626 aaKnown RBP13.99□□□□□ -0.17
USF1-208ENST00000528768 NEUROD6Q96NK8 337 aa13.99□□□□□ -0.17
USF1-208ENST00000528768 TLR7Q9NYK1 1049 aaKnown RBP13.99□□□□□ -0.17
USF1-208ENST00000528768 DBNLQ9UJU6 430 aaKnown RBP13.99□□□□□ -0.17
USF1-208ENST00000528768 RBM8AQ9Y5S9 174 aaKnown RBP13.99□□□□□ -0.17
USF1-208ENST00000528768 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
USF1-208ENST00000528768 ADM5C9JUS6 153 aa13.98□□□□□ -0.17
USF1-208ENST00000528768 PSMD14O00487 310 aa13.98□□□□□ -0.17
USF1-208ENST00000528768 HSP90B1P14625 803 aaKnown RBP13.98□□□□□ -0.17
USF1-208ENST00000528768 NCLP19338 710 aaKnown RBP13.98□□□□□ -0.17
USF1-208ENST00000528768 CASTP20810 708 aaKnown RBP13.98□□□□□ -0.17
USF1-208ENST00000528768 NECTIN1Q15223 517 aa13.98□□□□□ -0.17
USF1-208ENST00000528768 WASHC4Q2M389 1173 aa13.98□□□□□ -0.17
USF1-208ENST00000528768 ZNF296Q8WUU4 475 aaPredicted RBP13.98□□□□□ -0.17
USF1-208ENST00000528768 GZF1Q9H116 711 aaPredicted RBP13.98□□□□□ -0.17
USF1-208ENST00000528768 ZSWIM6Q9HCJ5 1215 aa13.98□□□□□ -0.17
USF1-208ENST00000528768 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
USF1-208ENST00000528768 ATP6V1DQ9Y5K8 247 aa13.98□□□□□ -0.17
USF1-208ENST00000528768 DDX49Q9Y6V7 483 aaKnown RBP13.98□□□□□ -0.17
USF1-208ENST00000528768 SHTN1A0MZ66 631 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 IFIT5Q13325 482 aaKnown RBP13.97□□□□□ -0.17
USF1-208ENST00000528768 KIF4BQ2VIQ3 1234 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 MCMDC2Q4G0Z9 681 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 CCDC158Q5M9N0 1113 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 GORABQ5T7V8 394 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 CREB3L3Q68CJ9 461 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 NOL8Q76FK4 1167 aaKnown RBP13.97□□□□□ -0.17
USF1-208ENST00000528768 RUFY3Q7L099 469 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 SLC51AQ86UW1 340 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 CHMP4CQ96CF2 233 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 TTC14Q96N46 770 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 EYA3Q99504 573 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 DNAJC2Q99543 621 aaKnown RBP13.97□□□□□ -0.17
USF1-208ENST00000528768 DBNDD2Q9BQY9 259 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 IL25Q9H293 177 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 SMC3Q9UQE7 1217 aa13.97□□□□□ -0.17
USF1-208ENST00000528768 MED23Q9ULK4 1368 aa13.96□□□□□ -0.17
USF1-208ENST00000528768 ANKRD36CQ5JPF3 1778 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms