RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 RGS22Q8NE09 1264 aa20.49■□□□□ 0.87
LTBP3-210ENST00000528516 ADAM21Q9UKJ8 722 aa20.49■□□□□ 0.87
LTBP3-210ENST00000528516 KNDC1Q76NI1 1749 aa20.49■□□□□ 0.87
LTBP3-210ENST00000528516 PRC1O43663 620 aa20.49■□□□□ 0.87
LTBP3-210ENST00000528516 AKAP2Q9Y2D5 859 aa20.49■□□□□ 0.87
LTBP3-210ENST00000528516 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
LTBP3-210ENST00000528516 UBR1Q8IWV7 1749 aa20.48■□□□□ 0.87
LTBP3-210ENST00000528516 USP6P35125 1406 aa20.48■□□□□ 0.87
LTBP3-210ENST00000528516 L2HGDHQ9H9P8 463 aa20.48■□□□□ 0.87
LTBP3-210ENST00000528516 KIAA0232Q92628 1395 aa20.48■□□□□ 0.87
LTBP3-210ENST00000528516 GOLGA8FQ08AF8 430 aa20.48■□□□□ 0.87
LTBP3-210ENST00000528516 GOLGA8DPQ0D2H9 430 aa20.48■□□□□ 0.87
LTBP3-210ENST00000528516 ST3GAL1Q11201 340 aa20.48■□□□□ 0.87
LTBP3-210ENST00000528516 CCDC24Q8N4L8 307 aa20.48■□□□□ 0.87
LTBP3-210ENST00000528516 ALG1Q9BT22 464 aa20.48■□□□□ 0.87
LTBP3-210ENST00000528516 RIMS1Q86UR5 1692 aaKnown RBP20.48■□□□□ 0.87
LTBP3-210ENST00000528516 USP5P45974 858 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 PPP2R3AQ06190 1150 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 FILIP1LQ4L180 1135 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 MUM1L1Q5H9M0 696 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 FBXO18Q8NFZ0 1043 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 SSH3Q8TE77 659 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 TM6SF1Q9BZW5 370 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 PSDA5PKW4 1024 aaPredicted RBP20.47■□□□□ 0.87
LTBP3-210ENST00000528516 ZSCAN12O43309 604 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 IVLP07476 585 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 STX17P56962 302 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 FAM53CQ9NYF3 392 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 hCG_1642624A0A1W2PR95 340 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 ANKRD18BA2A2Z9 1011 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 EFCAB8A8MWE9 144 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 SRLQ86TD4 932 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 IMPACTQ9P2X3 320 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 JRKLQ9Y4A0 524 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 C3P01024 1663 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 IGHMBP2P38935 993 aaKnown RBP20.47■□□□□ 0.87
LTBP3-210ENST00000528516 E2F4Q16254 413 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 TRMT1LQ7Z2T5 733 aaKnown RBP20.47■□□□□ 0.87
LTBP3-210ENST00000528516 VAT1LQ9HCJ6 419 aa20.47■□□□□ 0.87
LTBP3-210ENST00000528516 TTC41PQ6P2S7 1318 aa20.46■□□□□ 0.87
LTBP3-210ENST00000528516 ZSCAN16Q9H4T2 348 aaPredicted RBP20.46■□□□□ 0.87
LTBP3-210ENST00000528516 ACTN2P35609 894 aa20.46■□□□□ 0.87
LTBP3-210ENST00000528516 CC2D1AQ6P1N0 951 aaPredicted RBP20.46■□□□□ 0.87
LTBP3-210ENST00000528516 DHX40Q8IX18 779 aaKnown RBP20.46■□□□□ 0.87
LTBP3-210ENST00000528516 EIF3JO75822 258 aaKnown RBP20.46■□□□□ 0.87
LTBP3-210ENST00000528516 CDKL5O76039 1030 aa20.46■□□□□ 0.87
LTBP3-210ENST00000528516 HMGB1P09429 215 aaKnown RBP20.46■□□□□ 0.87
LTBP3-210ENST00000528516 JAKMIP3Q5VZ66 844 aa20.46■□□□□ 0.87
LTBP3-210ENST00000528516 ARMCX5Q6P1M9 558 aa20.46■□□□□ 0.87
LTBP3-210ENST00000528516 ZCRB1Q8TBF4 217 aaKnown RBP20.46■□□□□ 0.87
LTBP3-210ENST00000528516 ERBB3P21860 1342 aa20.45■□□□□ 0.86
LTBP3-210ENST00000528516 GPIHBP1Q8IV16 184 aa20.45■□□□□ 0.86
LTBP3-210ENST00000528516 NCOA7Q8NI08 942 aa20.45■□□□□ 0.86
LTBP3-210ENST00000528516 PATL2C9JE40 543 aaKnown RBP20.45■□□□□ 0.86
LTBP3-210ENST00000528516 GIGYF1O75420 1035 aaPredicted RBP20.45■□□□□ 0.86
LTBP3-210ENST00000528516 SYKP43405 635 aa20.45■□□□□ 0.86
LTBP3-210ENST00000528516 FAM160A1Q05DH4 1040 aa20.45■□□□□ 0.86
LTBP3-210ENST00000528516 TNNI3KQ59H18 835 aa20.45■□□□□ 0.86
LTBP3-210ENST00000528516 CCDC12Q8WUD4 166 aaPredicted RBP20.45■□□□□ 0.86
LTBP3-210ENST00000528516 HMG20BQ9P0W2 317 aa20.45■□□□□ 0.86
LTBP3-210ENST00000528516 FPGT-TNNI3KV9GXZ4 949 aa20.45■□□□□ 0.86
LTBP3-210ENST00000528516 UBASH3AP57075 661 aa20.45■□□□□ 0.86
LTBP3-210ENST00000528516 MAP3K12Q12852 859 aa20.45■□□□□ 0.86
LTBP3-210ENST00000528516 PUF60Q9UHX1 559 aaKnown RBP20.45■□□□□ 0.86
LTBP3-210ENST00000528516 TECPR2O15040 1411 aa20.44■□□□□ 0.86
LTBP3-210ENST00000528516 BEND3Q5T5X7 828 aa20.44■□□□□ 0.86
LTBP3-210ENST00000528516 RPS6KB1P23443 525 aa20.44■□□□□ 0.86
LTBP3-210ENST00000528516 KARSQ15046 597 aaKnown RBP20.44■□□□□ 0.86
LTBP3-210ENST00000528516 DHX32Q7L7V1 743 aaKnown RBP20.44■□□□□ 0.86
LTBP3-210ENST00000528516 TUBB4AP04350 444 aa20.44■□□□□ 0.86
LTBP3-210ENST00000528516 GCKRQ14397 625 aa20.44■□□□□ 0.86
LTBP3-210ENST00000528516 SECISBP2LQ93073 1101 aaKnown RBP20.44■□□□□ 0.86
LTBP3-210ENST00000528516 PHKBQ93100 1093 aa20.44■□□□□ 0.86
LTBP3-210ENST00000528516 CCDC47Q96A33 483 aaKnown RBP20.44■□□□□ 0.86
LTBP3-210ENST00000528516 PLEKHA4Q9H4M7 779 aa20.44■□□□□ 0.86
LTBP3-210ENST00000528516 SBNO1A3KN83 1393 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 SASH3O75995 380 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 DPCR1Q3MIW9 517 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 TANGO6Q9C0B7 1094 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 PDE11AQ9HCR9 933 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 NRXN3Q9Y4C0 1643 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 TADA3O75528 432 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 RBM43Q6ZSC3 357 aaKnown RBP20.43■□□□□ 0.86
LTBP3-210ENST00000528516 GPR161Q8N6U8 529 aaKnown RBP20.43■□□□□ 0.86
LTBP3-210ENST00000528516 GOLGA1Q92805 767 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 PARD6BQ9BYG5 372 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 GOLPH3LQ9H4A5 285 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 ZRANB2O95218 330 aaKnown RBP eCLIP20.43■□□□□ 0.86
LTBP3-210ENST00000528516 TBC1D8O95759 1140 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 TTLL7Q6ZT98 887 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 ZNF589Q86UQ0 364 aaPredicted RBP20.43■□□□□ 0.86
LTBP3-210ENST00000528516 CMTR1Q8N1G2 835 aaKnown RBP20.43■□□□□ 0.86
LTBP3-210ENST00000528516 MRPS27Q92552 414 aaKnown RBP20.43■□□□□ 0.86
LTBP3-210ENST00000528516 USP28Q96RU2 1077 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 MYCBPQ99417 103 aaPredicted RBP20.43■□□□□ 0.86
LTBP3-210ENST00000528516 USP32Q8NFA0 1604 aa20.43■□□□□ 0.86
LTBP3-210ENST00000528516 B4E1Z4 1266 aa20.42■□□□□ 0.86
LTBP3-210ENST00000528516 PRDM1O75626 825 aa20.42■□□□□ 0.86
LTBP3-210ENST00000528516 CHGBP05060 677 aa20.42■□□□□ 0.86
LTBP3-210ENST00000528516 EXOC4Q96A65 974 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms