RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 MEI1Q5TIA1 1274 aa9.84□□□□□ -0.83
PCF11-202ENST00000528336 CD163Q86VB7 1156 aa9.84□□□□□ -0.83
PCF11-202ENST00000528336 MRPL18Q9H0U6 180 aaKnown RBP9.84□□□□□ -0.83
PCF11-202ENST00000528336 PPM1HQ9ULR3 514 aa9.84□□□□□ -0.83
PCF11-202ENST00000528336 CHRNA4P43681 627 aa9.83□□□□□ -0.84
PCF11-202ENST00000528336 ACAD11Q709F0 780 aa9.83□□□□□ -0.84
PCF11-202ENST00000528336 ALX3O95076 343 aa9.82□□□□□ -0.84
PCF11-202ENST00000528336 MAOBP27338 520 aa9.82□□□□□ -0.84
PCF11-202ENST00000528336 ITGAEP38570 1179 aa9.82□□□□□ -0.84
PCF11-202ENST00000528336 NECAB3Q96P71 396 aaPredicted RBP9.82□□□□□ -0.84
PCF11-202ENST00000528336 TRIM56Q9BRZ2 755 aaKnown RBP9.82□□□□□ -0.84
PCF11-202ENST00000528336 CEP44Q9C0F1 390 aa9.82□□□□□ -0.84
PCF11-202ENST00000528336 CYP11A1P05108 521 aa9.81□□□□□ -0.84
PCF11-202ENST00000528336 NRG1Q02297 640 aaPredicted RBP9.81□□□□□ -0.84
PCF11-202ENST00000528336 POU4F3Q15319 338 aa9.81□□□□□ -0.84
PCF11-202ENST00000528336 AGGF1Q8N302 714 aaeCLIP9.81□□□□□ -0.84
PCF11-202ENST00000528336 ZNF428Q96B54 188 aa9.81□□□□□ -0.84
PCF11-202ENST00000528336 LOC100289279A0A1B0GTE1 492 aa9.8□□□□□ -0.84
PCF11-202ENST00000528336 IREB2P48200 963 aaKnown RBP9.8□□□□□ -0.84
PCF11-202ENST00000528336 MRPL58Q14197 206 aaKnown RBP9.8□□□□□ -0.84
PCF11-202ENST00000528336 TAF1CQ15572 869 aaPredicted RBP9.8□□□□□ -0.84
PCF11-202ENST00000528336 CCDC85BQ15834 202 aaPredicted RBP9.8□□□□□ -0.84
PCF11-202ENST00000528336 KIAA1211Q6ZU35 1233 aa9.8□□□□□ -0.84
PCF11-202ENST00000528336 CRELD1Q96HD1 420 aa9.8□□□□□ -0.84
PCF11-202ENST00000528336 CORO1BQ9BR76 489 aa9.8□□□□□ -0.84
PCF11-202ENST00000528336 ZC3H12CQ9C0D7 883 aaKnown RBP9.8□□□□□ -0.84
PCF11-202ENST00000528336 AKTIPQ9H8T0 292 aa9.8□□□□□ -0.84
PCF11-202ENST00000528336 UNCXA6NJT0 531 aa9.79□□□□□ -0.84
PCF11-202ENST00000528336 F8W735 103 aaPredicted RBP9.79□□□□□ -0.84
PCF11-202ENST00000528336 ENC1O14682 589 aa9.79□□□□□ -0.84
PCF11-202ENST00000528336 EIF4EBP3O60516 100 aaPredicted RBP9.79□□□□□ -0.84
PCF11-202ENST00000528336 ECEL1O95672 775 aa9.79□□□□□ -0.84
PCF11-202ENST00000528336 CELA3AP09093 270 aa9.79□□□□□ -0.84
PCF11-202ENST00000528336 AP3B2Q13367 1082 aa9.79□□□□□ -0.84
PCF11-202ENST00000528336 MBTPS1Q14703 1052 aa9.79□□□□□ -0.84
PCF11-202ENST00000528336 PLA2G4EQ3MJ16 856 aa9.79□□□□□ -0.84
PCF11-202ENST00000528336 WFDC12Q8WWY7 111 aa9.79□□□□□ -0.84
PCF11-202ENST00000528336 PAGE1O75459 146 aa9.78□□□□□ -0.84
PCF11-202ENST00000528336 DLGAP3O95886 979 aa9.78□□□□□ -0.84
PCF11-202ENST00000528336 ADGRE1Q14246 886 aa9.78□□□□□ -0.84
PCF11-202ENST00000528336 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.78□□□□□ -0.84
PCF11-202ENST00000528336 SULF2Q8IWU5 870 aa9.78□□□□□ -0.84
PCF11-202ENST00000528336 TMEM130Q8N3G9 435 aa9.78□□□□□ -0.84
PCF11-202ENST00000528336 STK35Q8TDR2 534 aa9.78□□□□□ -0.84
PCF11-202ENST00000528336 RUSC1Q9BVN2 902 aa9.78□□□□□ -0.84
PCF11-202ENST00000528336 NRSN2Q9GZP1 204 aa9.78□□□□□ -0.84
PCF11-202ENST00000528336 CBX8Q9HC52 389 aa9.78□□□□□ -0.84
PCF11-202ENST00000528336 USP31Q70CQ4 1352 aa9.77□□□□□ -0.84
PCF11-202ENST00000528336 CTSBP07858 339 aa9.77□□□□□ -0.85
PCF11-202ENST00000528336 NME2P22392 152 aa9.77□□□□□ -0.85
PCF11-202ENST00000528336 ARNTP27540 789 aa9.77□□□□□ -0.85
PCF11-202ENST00000528336 NOS3P29474 1203 aa9.77□□□□□ -0.85
PCF11-202ENST00000528336 MAP3K11Q16584 847 aa9.77□□□□□ -0.85
PCF11-202ENST00000528336 SV2BQ7L1I2 683 aa9.77□□□□□ -0.85
PCF11-202ENST00000528336 ANKRD24Q8TF21 1146 aa9.77□□□□□ -0.85
PCF11-202ENST00000528336 MRRFQ96E11 262 aaKnown RBP9.77□□□□□ -0.85
PCF11-202ENST00000528336 ITGB2P05107 769 aa9.76□□□□□ -0.85
PCF11-202ENST00000528336 RBM25P49756 843 aaKnown RBP9.76□□□□□ -0.85
PCF11-202ENST00000528336 PDE3AQ14432 1141 aa9.76□□□□□ -0.85
PCF11-202ENST00000528336 TSNAXIP1Q2TAA8 658 aa9.76□□□□□ -0.85
PCF11-202ENST00000528336 KCNB2Q92953 911 aa9.76□□□□□ -0.85
PCF11-202ENST00000528336 BACH2Q9BYV9 841 aa9.76□□□□□ -0.85
PCF11-202ENST00000528336 SAMM50Q9Y512 469 aa9.76□□□□□ -0.85
PCF11-202ENST00000528336 GLB1P16278 677 aa9.75□□□□□ -0.85
PCF11-202ENST00000528336 GATA4P43694 442 aa9.75□□□□□ -0.85
PCF11-202ENST00000528336 TXNRD3Q86VQ6 643 aa9.75□□□□□ -0.85
PCF11-202ENST00000528336 TMEM87AQ8NBN3 555 aa9.75□□□□□ -0.85
PCF11-202ENST00000528336 RNF208Q9H0X6 261 aa9.75□□□□□ -0.85
PCF11-202ENST00000528336 GSTP1P09211 210 aaKnown RBP9.74□□□□□ -0.85
PCF11-202ENST00000528336 BMP6P22004 513 aa9.74□□□□□ -0.85
PCF11-202ENST00000528336 ST13P50502 369 aaKnown RBP9.74□□□□□ -0.85
PCF11-202ENST00000528336 EXOSC6Q5RKV6 272 aaKnown RBP9.74□□□□□ -0.85
PCF11-202ENST00000528336 NUTM2GQ5VZR2 741 aa9.74□□□□□ -0.85
PCF11-202ENST00000528336 GPAT2Q6NUI2 795 aa9.74□□□□□ -0.85
PCF11-202ENST00000528336 GRIN3AQ8TCU5 1115 aa9.74□□□□□ -0.85
PCF11-202ENST00000528336 EMILIN2Q9BXX0 1053 aa9.74□□□□□ -0.85
PCF11-202ENST00000528336 LIG1P18858 919 aa9.73□□□□□ -0.85
PCF11-202ENST00000528336 PCNX4Q63HM2 1172 aa9.73□□□□□ -0.85
PCF11-202ENST00000528336 MAP1SQ66K74 1059 aaPredicted RBP9.73□□□□□ -0.85
PCF11-202ENST00000528336 PDZD3Q86UT5 571 aa9.73□□□□□ -0.85
PCF11-202ENST00000528336 CCDC86Q9H6F5 360 aaKnown RBP9.73□□□□□ -0.85
PCF11-202ENST00000528336 RAD18Q9NS91 495 aa9.73□□□□□ -0.85
PCF11-202ENST00000528336 KIAA1522Q9P206 1035 aaPredicted RBP9.73□□□□□ -0.85
PCF11-202ENST00000528336 MEGF11A6BM72 1044 aa9.72□□□□□ -0.85
PCF11-202ENST00000528336 LDLRAD1Q5T700 205 aa9.72□□□□□ -0.85
PCF11-202ENST00000528336 RASIP1Q5U651 963 aa9.72□□□□□ -0.85
PCF11-202ENST00000528336 TTBK2Q6IQ55 1244 aa9.72□□□□□ -0.85
PCF11-202ENST00000528336 MPRIPQ6WCQ1 1025 aa9.72□□□□□ -0.85
PCF11-202ENST00000528336 C12orf50Q8NA57 414 aaPredicted RBP9.72□□□□□ -0.85
PCF11-202ENST00000528336 TMPRSS13Q9BYE2 586 aa9.72□□□□□ -0.85
PCF11-202ENST00000528336 F6X3S4 739 aa9.71□□□□□ -0.86
PCF11-202ENST00000528336 AKAP4Q5JQC9 854 aa9.71□□□□□ -0.86
PCF11-202ENST00000528336 HP1BP3Q5SSJ5 553 aaPredicted RBP9.71□□□□□ -0.86
PCF11-202ENST00000528336 FDX2Q6P4F2 183 aa9.71□□□□□ -0.86
PCF11-202ENST00000528336 WDR89Q96FK6 387 aaPredicted RBP9.71□□□□□ -0.86
PCF11-202ENST00000528336 MEGF10Q96KG7 1140 aa9.71□□□□□ -0.86
PCF11-202ENST00000528336 NOC4LQ9BVI4 516 aaKnown RBP9.71□□□□□ -0.86
PCF11-202ENST00000528336 SART1O43290 800 aaKnown RBP9.7□□□□□ -0.86
PCF11-202ENST00000528336 DRD2P14416 443 aa9.7□□□□□ -0.86
PCF11-202ENST00000528336 LRRC14Q15048 493 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms