RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 MTX1Q13505 466 aa13.89□□□□□ -0.19
NR1H3-230ENST00000527949 PUM3Q15397 648 aaKnown RBP13.89□□□□□ -0.19
NR1H3-230ENST00000527949 CAVIN4Q5BKX8 364 aa13.89□□□□□ -0.19
NR1H3-230ENST00000527949 OTOP1Q7RTM1 612 aa13.89□□□□□ -0.19
NR1H3-230ENST00000527949 TBC1D22AQ8WUA7 517 aa13.89□□□□□ -0.19
NR1H3-230ENST00000527949 MRIQ9BWK5 157 aa13.89□□□□□ -0.19
NR1H3-230ENST00000527949 DEFB129Q9H1M3 183 aa13.89□□□□□ -0.19
NR1H3-230ENST00000527949 SUGT1Q9Y2Z0 365 aa13.89□□□□□ -0.19
NR1H3-230ENST00000527949 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
NR1H3-230ENST00000527949 IFIT1P09914 478 aaKnown RBP13.88□□□□□ -0.19
NR1H3-230ENST00000527949 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
NR1H3-230ENST00000527949 GYG1P46976 350 aa13.88□□□□□ -0.19
NR1H3-230ENST00000527949 MFSD14BQ5SR56 506 aa13.88□□□□□ -0.19
NR1H3-230ENST00000527949 ATF7IPQ6VMQ6 1270 aa13.88□□□□□ -0.19
NR1H3-230ENST00000527949 LPIN2Q92539 896 aa13.88□□□□□ -0.19
NR1H3-230ENST00000527949 COPRSQ9NQ92 184 aa13.88□□□□□ -0.19
NR1H3-230ENST00000527949 SERPINA10Q9UK55 444 aa13.88□□□□□ -0.19
NR1H3-230ENST00000527949 SCAF8Q9UPN6 1271 aaKnown RBP13.88□□□□□ -0.19
NR1H3-230ENST00000527949 IREB2P48200 963 aaKnown RBP13.87□□□□□ -0.19
NR1H3-230ENST00000527949 PRKG1Q13976 671 aa13.87□□□□□ -0.19
NR1H3-230ENST00000527949 CFAP100Q494V2 611 aa13.87□□□□□ -0.19
NR1H3-230ENST00000527949 ATG9AQ7Z3C6 839 aa13.87□□□□□ -0.19
NR1H3-230ENST00000527949 ARMC5Q96C12 935 aa13.87□□□□□ -0.19
NR1H3-230ENST00000527949 PTPN22Q9Y2R2 807 aa13.87□□□□□ -0.19
NR1H3-230ENST00000527949 ZBED9Q6R2W3 1325 aa13.87□□□□□ -0.19
NR1H3-230ENST00000527949 SLC5A1P13866 664 aa13.86□□□□□ -0.19
NR1H3-230ENST00000527949 TRIM27P14373 513 aa13.86□□□□□ -0.19
NR1H3-230ENST00000527949 IL15P40933 162 aaPredicted RBP13.86□□□□□ -0.19
NR1H3-230ENST00000527949 HNRNPUQ00839 825 aaKnown RBP eCLIP13.86□□□□□ -0.19
NR1H3-230ENST00000527949 NBPF11Q86T75 865 aa13.86□□□□□ -0.19
NR1H3-230ENST00000527949 VPS37DQ86XT2 251 aa13.86□□□□□ -0.19
NR1H3-230ENST00000527949 KLHDC4Q8TBB5 520 aa13.86□□□□□ -0.19
NR1H3-230ENST00000527949 WNK4Q96J92 1243 aa13.86□□□□□ -0.19
NR1H3-230ENST00000527949 MEIS3Q99687 375 aa13.86□□□□□ -0.19
NR1H3-230ENST00000527949 TMEM106CQ9BVX2 250 aa13.86□□□□□ -0.19
NR1H3-230ENST00000527949 R3HDMLQ9H3Y0 253 aa13.86□□□□□ -0.19
NR1H3-230ENST00000527949 EFCC1Q9HA90 598 aa13.86□□□□□ -0.19
NR1H3-230ENST00000527949 LRRFIP2Q9Y608 721 aaKnown RBP13.86□□□□□ -0.19
NR1H3-230ENST00000527949 WDHD1O75717 1129 aaPredicted RBP13.85□□□□□ -0.19
NR1H3-230ENST00000527949 TNFAIP1Q13829 316 aa13.85□□□□□ -0.19
NR1H3-230ENST00000527949 ANKRD13AQ8IZ07 590 aa13.85□□□□□ -0.19
NR1H3-230ENST00000527949 CEP126Q9P2H0 1117 aa13.85□□□□□ -0.19
NR1H3-230ENST00000527949 MAST3O60307 1309 aa13.85□□□□□ -0.19
NR1H3-230ENST00000527949 POTEFA5A3E0 1075 aa13.84□□□□□ -0.19
NR1H3-230ENST00000527949 SP3Q02447 781 aa13.84□□□□□ -0.19
NR1H3-230ENST00000527949 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
NR1H3-230ENST00000527949 PRMT6Q96LA8 375 aaPredicted RBP13.84□□□□□ -0.19
NR1H3-230ENST00000527949 TTF2Q9UNY4 1162 aaKnown RBP13.84□□□□□ -0.19
NR1H3-230ENST00000527949 TESPA1A2RU30 521 aaPredicted RBP13.83□□□□□ -0.2
NR1H3-230ENST00000527949 IGF2BP3O00425 579 aaKnown RBP eCLIP13.83□□□□□ -0.2
NR1H3-230ENST00000527949 SEMA3EO15041 775 aa13.83□□□□□ -0.2
NR1H3-230ENST00000527949 BCAR3O75815 825 aa13.83□□□□□ -0.2
NR1H3-230ENST00000527949 BCAMP50895 628 aa13.83□□□□□ -0.2
NR1H3-230ENST00000527949 ZKSCAN2Q63HK3 967 aa13.83□□□□□ -0.2
NR1H3-230ENST00000527949 WDR66Q8TBY9 1149 aa13.83□□□□□ -0.2
NR1H3-230ENST00000527949 MYH13Q9UKX3 1938 aa13.83□□□□□ -0.2
NR1H3-230ENST00000527949 LAMB1P07942 1786 aa13.82□□□□□ -0.2
NR1H3-230ENST00000527949 F8W031 263 aaPredicted RBP13.82□□□□□ -0.2
NR1H3-230ENST00000527949 CRKP46108 304 aa13.82□□□□□ -0.2
NR1H3-230ENST00000527949 CRHR2Q13324 411 aa13.82□□□□□ -0.2
NR1H3-230ENST00000527949 ATP2B3Q16720 1220 aa13.82□□□□□ -0.2
NR1H3-230ENST00000527949 FKBP1CQ5VVH2 108 aa13.82□□□□□ -0.2
NR1H3-230ENST00000527949 HHIPL2Q6UWX4 724 aa13.82□□□□□ -0.2
NR1H3-230ENST00000527949 DZIP1LQ8IYY4 767 aaKnown RBP13.82□□□□□ -0.2
NR1H3-230ENST00000527949 CD99L2Q8TCZ2 262 aa13.82□□□□□ -0.2
NR1H3-230ENST00000527949 PDS5AQ29RF7 1337 aaKnown RBP13.82□□□□□ -0.2
NR1H3-230ENST00000527949 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
NR1H3-230ENST00000527949 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
NR1H3-230ENST00000527949 GNAI2P04899 355 aa13.81□□□□□ -0.2
NR1H3-230ENST00000527949 TEKT1Q969V4 418 aa13.81□□□□□ -0.2
NR1H3-230ENST00000527949 ZDHHC15Q96MV8 337 aa13.81□□□□□ -0.2
NR1H3-230ENST00000527949 GNL3LQ9NVN8 582 aaKnown RBP13.81□□□□□ -0.2
NR1H3-230ENST00000527949 ZNF70Q9UC06 446 aaPredicted RBP13.81□□□□□ -0.2
NR1H3-230ENST00000527949 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
NR1H3-230ENST00000527949 SSC5DA1L4H1 1573 aa13.8□□□□□ -0.2
NR1H3-230ENST00000527949 SRGAP3O43295 1099 aa13.8□□□□□ -0.2
NR1H3-230ENST00000527949 FXR1P51114 621 aaKnown RBP eCLIP13.8□□□□□ -0.2
NR1H3-230ENST00000527949 RBM5P52756 815 aaKnown RBP eCLIP13.8□□□□□ -0.2
NR1H3-230ENST00000527949 SLC9C1Q4G0N8 1177 aa13.8□□□□□ -0.2
NR1H3-230ENST00000527949 ZNF333Q96JL9 665 aa13.8□□□□□ -0.2
NR1H3-230ENST00000527949 CLMNQ96JQ2 1002 aa13.8□□□□□ -0.2
NR1H3-230ENST00000527949 VEZTQ9HBM0 779 aa13.8□□□□□ -0.2
NR1H3-230ENST00000527949 ZFYVE28Q9HCC9 887 aa13.8□□□□□ -0.2
NR1H3-230ENST00000527949 AKAP2Q9Y2D5 859 aa13.8□□□□□ -0.2
NR1H3-230ENST00000527949 PCDHAC2Q9Y5I4 1007 aa13.8□□□□□ -0.2
NR1H3-230ENST00000527949 CLRN2A0PK11 232 aa13.79□□□□□ -0.2
NR1H3-230ENST00000527949 USP2O75604 605 aaPredicted RBP13.79□□□□□ -0.2
NR1H3-230ENST00000527949 GNRH1P01148 92 aa13.79□□□□□ -0.2
NR1H3-230ENST00000527949 EN2P19622 333 aaPredicted RBP13.79□□□□□ -0.2
NR1H3-230ENST00000527949 TNNI2P48788 182 aa13.79□□□□□ -0.2
NR1H3-230ENST00000527949 GTF2A2P52657 109 aa13.79□□□□□ -0.2
NR1H3-230ENST00000527949 CHAF1AQ13111 956 aaPredicted RBP13.79□□□□□ -0.2
NR1H3-230ENST00000527949 RASA3Q14644 834 aa13.79□□□□□ -0.2
NR1H3-230ENST00000527949 FAM83AQ86UY5 434 aa13.79□□□□□ -0.2
NR1H3-230ENST00000527949 FRAT1Q92837 279 aaPredicted RBP13.79□□□□□ -0.2
NR1H3-230ENST00000527949 SIL1Q9H173 461 aa13.79□□□□□ -0.2
NR1H3-230ENST00000527949 DENND2AQ9ULE3 1009 aa13.79□□□□□ -0.2
NR1H3-230ENST00000527949 IQSEC3Q9UPP2 1182 aaPredicted RBP13.79□□□□□ -0.2
NR1H3-230ENST00000527949 PA2G4Q9UQ80 394 aaKnown RBP13.79□□□□□ -0.2
NR1H3-230ENST00000527949 RPAP1Q9BWH6 1393 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms