RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 MAST3O60307 1309 aa17.7■□□□□ 0.42
CAPN1-212ENST00000527887 ZBTB22O15209 634 aa17.69■□□□□ 0.42
CAPN1-212ENST00000527887 ZBTB48P10074 688 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-212ENST00000527887 IL15P40933 162 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-212ENST00000527887 IREB2P48200 963 aaKnown RBP17.69■□□□□ 0.42
CAPN1-212ENST00000527887 CHAF1AQ13111 956 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-212ENST00000527887 DGKZQ13574 1117 aa17.69■□□□□ 0.42
CAPN1-212ENST00000527887 PRKG1Q13976 671 aa17.69■□□□□ 0.42
CAPN1-212ENST00000527887 SPRYD7Q5W111 196 aa17.69■□□□□ 0.42
CAPN1-212ENST00000527887 ATG9AQ7Z3C6 839 aa17.69■□□□□ 0.42
CAPN1-212ENST00000527887 WDR66Q8TBY9 1149 aa17.69■□□□□ 0.42
CAPN1-212ENST00000527887 TEKT1Q969V4 418 aa17.69■□□□□ 0.42
CAPN1-212ENST00000527887 MANSC4A6NHS7 340 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-212ENST00000527887 ALDH1A1P00352 501 aa17.68■□□□□ 0.42
CAPN1-212ENST00000527887 NBPF12Q5TAG4 269 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-212ENST00000527887 CFHR5Q9BXR6 569 aa17.68■□□□□ 0.42
CAPN1-212ENST00000527887 TDRD3Q9H7E2 651 aaKnown RBP17.68■□□□□ 0.42
CAPN1-212ENST00000527887 COPRSQ9NQ92 184 aa17.68■□□□□ 0.42
CAPN1-212ENST00000527887 GNL3LQ9NVN8 582 aaKnown RBP17.68■□□□□ 0.42
CAPN1-212ENST00000527887 IQSEC3Q9UPP2 1182 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-212ENST00000527887 FKBP1CQ5VVH2 108 aa17.67■□□□□ 0.42
CAPN1-212ENST00000527887 ANKRD13AQ8IZ07 590 aa17.67■□□□□ 0.42
CAPN1-212ENST00000527887 ZDHHC15Q96MV8 337 aa17.67■□□□□ 0.42
CAPN1-212ENST00000527887 LRRFIP2Q9Y608 721 aaKnown RBP17.67■□□□□ 0.42
CAPN1-212ENST00000527887 USP2O75604 605 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-212ENST00000527887 HHIPL2Q6UWX4 724 aa17.66■□□□□ 0.42
CAPN1-212ENST00000527887 CCDC85CA6NKD9 419 aa17.65■□□□□ 0.42
CAPN1-212ENST00000527887 SEMA3EO15041 775 aa17.65■□□□□ 0.42
CAPN1-212ENST00000527887 MTX1Q13505 466 aa17.65■□□□□ 0.42
CAPN1-212ENST00000527887 PKN2Q16513 984 aaKnown RBP17.65■□□□□ 0.42
CAPN1-212ENST00000527887 ATP2B3Q16720 1220 aa17.65■□□□□ 0.42
CAPN1-212ENST00000527887 CTU1Q7Z7A3 348 aaKnown RBP17.65■□□□□ 0.42
CAPN1-212ENST00000527887 FAM83AQ86UY5 434 aa17.65■□□□□ 0.42
CAPN1-212ENST00000527887 HOOK2Q96ED9 719 aa17.65■□□□□ 0.42
CAPN1-212ENST00000527887 MEIS3Q99687 375 aa17.65■□□□□ 0.42
CAPN1-212ENST00000527887 TMOD2Q9NZR1 351 aa17.65■□□□□ 0.42
CAPN1-212ENST00000527887 AOX1Q06278 1338 aa17.65■□□□□ 0.42
CAPN1-212ENST00000527887 GRIK5Q16478 980 aa17.64■□□□□ 0.41
CAPN1-212ENST00000527887 ATF7IPQ6VMQ6 1270 aa17.64■□□□□ 0.41
CAPN1-212ENST00000527887 TEPSINQ96N21 525 aa17.64■□□□□ 0.41
CAPN1-212ENST00000527887 SIL1Q9H173 461 aa17.64■□□□□ 0.41
CAPN1-212ENST00000527887 SSC5DA1L4H1 1573 aa17.64■□□□□ 0.41
CAPN1-212ENST00000527887 TCP10L2B9ZVM9 353 aa17.63■□□□□ 0.41
CAPN1-212ENST00000527887 TBC1D8O95759 1140 aa17.63■□□□□ 0.41
CAPN1-212ENST00000527887 RGS19P49795 217 aa17.63■□□□□ 0.41
CAPN1-212ENST00000527887 MKRN3Q13064 507 aaKnown RBP17.63■□□□□ 0.41
CAPN1-212ENST00000527887 OTUD7BQ6GQQ9 843 aa17.63■□□□□ 0.41
CAPN1-212ENST00000527887 APOBEC3HQ6NTF7 200 aaKnown RBP17.63■□□□□ 0.41
CAPN1-212ENST00000527887 WNK4Q96J92 1243 aa17.63■□□□□ 0.41
CAPN1-212ENST00000527887 DENND2AQ9ULE3 1009 aa17.63■□□□□ 0.41
CAPN1-212ENST00000527887 GPR25O00155 361 aa17.62■□□□□ 0.41
CAPN1-212ENST00000527887 TRIM27P14373 513 aa17.62■□□□□ 0.41
CAPN1-212ENST00000527887 ZGPATQ8N5A5 531 aaKnown RBP17.62■□□□□ 0.41
CAPN1-212ENST00000527887 FZD1Q9UP38 647 aa17.62■□□□□ 0.41
CAPN1-212ENST00000527887 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
CAPN1-212ENST00000527887 SALL1Q9NSC2 1324 aa17.62■□□□□ 0.41
CAPN1-212ENST00000527887 AKAP11Q9UKA4 1901 aa17.61■□□□□ 0.41
CAPN1-212ENST00000527887 CASP8AP2Q9UKL3 1982 aa17.61■□□□□ 0.41
CAPN1-212ENST00000527887 SRGAP3O43295 1099 aa17.61■□□□□ 0.41
CAPN1-212ENST00000527887 GNAI2P04899 355 aa17.61■□□□□ 0.41
CAPN1-212ENST00000527887 MAP3K9P80192 1104 aa17.61■□□□□ 0.41
CAPN1-212ENST00000527887 IFNL1Q8IU54 200 aa17.61■□□□□ 0.41
CAPN1-212ENST00000527887 ZNF296Q8WUU4 475 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-212ENST00000527887 CLMNQ96JQ2 1002 aa17.61■□□□□ 0.41
CAPN1-212ENST00000527887 TMEM39BQ9GZU3 492 aa17.61■□□□□ 0.41
CAPN1-212ENST00000527887 ECM29Q5VYK3 1845 aa17.61■□□□□ 0.41
CAPN1-212ENST00000527887 TESPA1A2RU30 521 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-212ENST00000527887 BCAR3O75815 825 aa17.6■□□□□ 0.41
CAPN1-212ENST00000527887 FRAT1Q92837 279 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-212ENST00000527887 PA2G4Q9UQ80 394 aaKnown RBP17.6■□□□□ 0.41
CAPN1-212ENST00000527887 PDS5AQ29RF7 1337 aaKnown RBP17.59■□□□□ 0.41
CAPN1-212ENST00000527887 FKTNO75072 461 aa17.59■□□□□ 0.41
CAPN1-212ENST00000527887 LDHBP07195 334 aaKnown RBP17.59■□□□□ 0.41
CAPN1-212ENST00000527887 HNRNPUQ00839 825 aaKnown RBP eCLIP17.59■□□□□ 0.41
CAPN1-212ENST00000527887 ZKSCAN2Q63HK3 967 aa17.59■□□□□ 0.41
CAPN1-212ENST00000527887 CSADQ9Y600 493 aa17.59■□□□□ 0.41
CAPN1-212ENST00000527887 ARAP2Q8WZ64 1704 aa17.58■□□□□ 0.41
CAPN1-212ENST00000527887 DCAF15Q66K64 600 aa17.58■□□□□ 0.4
CAPN1-212ENST00000527887 CCDC102BQ68D86 513 aa17.58■□□□□ 0.4
CAPN1-212ENST00000527887 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-212ENST00000527887 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.58■□□□□ 0.4
CAPN1-212ENST00000527887 FAM151AQ8WW52 585 aa17.58■□□□□ 0.4
CAPN1-212ENST00000527887 RPAP1Q9BWH6 1393 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-212ENST00000527887 PHKA1P46020 1223 aa17.57■□□□□ 0.4
CAPN1-212ENST00000527887 MVPQ14764 893 aaKnown RBP17.57■□□□□ 0.4
CAPN1-212ENST00000527887 SLF2Q8IX21 1173 aa17.57■□□□□ 0.4
CAPN1-212ENST00000527887 OPTNQ96CV9 577 aa17.57■□□□□ 0.4
CAPN1-212ENST00000527887 ELP3Q9H9T3 547 aa17.57■□□□□ 0.4
CAPN1-212ENST00000527887 A0A1B0GUL7 405 aa17.56■□□□□ 0.4
CAPN1-212ENST00000527887 PRDX5P30044 214 aa17.56■□□□□ 0.4
CAPN1-212ENST00000527887 GJA5P36382 358 aa17.56■□□□□ 0.4
CAPN1-212ENST00000527887 GTF2A2P52657 109 aa17.56■□□□□ 0.4
CAPN1-212ENST00000527887 CACNB3P54284 484 aa17.56■□□□□ 0.4
CAPN1-212ENST00000527887 TIMM10P62072 90 aa17.56■□□□□ 0.4
CAPN1-212ENST00000527887 MLLT1Q03111 559 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-212ENST00000527887 SPTY2D1Q68D10 685 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-212ENST00000527887 DAGLAQ9Y4D2 1042 aa17.56■□□□□ 0.4
CAPN1-212ENST00000527887 IGF2BP3O00425 579 aaKnown RBP eCLIP17.55■□□□□ 0.4
CAPN1-212ENST00000527887 TFCP2Q12800 502 aa17.55■□□□□ 0.4
CAPN1-212ENST00000527887 G3BP1Q13283 466 aaKnown RBP eCLIP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms