RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 HMG20BQ9P0W2 317 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 ABCF2Q9UG63 623 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 SERPINA10Q9UK55 444 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 PCDHAC2Q9Y5I4 1007 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 MYO1BO43795 1136 aa20.26■□□□□ 0.83
SSH3-205ENST00000527821 PRDX5P30044 214 aa20.26■□□□□ 0.83
SSH3-205ENST00000527821 MCAMP43121 646 aa20.26■□□□□ 0.83
SSH3-205ENST00000527821 CRKP46108 304 aa20.26■□□□□ 0.83
SSH3-205ENST00000527821 PI16Q6UXB8 463 aa20.26■□□□□ 0.83
SSH3-205ENST00000527821 ZBED3Q96IU2 234 aaPredicted RBP20.26■□□□□ 0.83
SSH3-205ENST00000527821 PITPNM2Q9BZ72 1349 aa20.26■□□□□ 0.83
SSH3-205ENST00000527821 SPDYE2BA6NHP3 402 aa20.25■□□□□ 0.83
SSH3-205ENST00000527821 SPDYE6P0CI01 402 aa20.25■□□□□ 0.83
SSH3-205ENST00000527821 HDLBPQ00341 1268 aaKnown RBP20.25■□□□□ 0.83
SSH3-205ENST00000527821 FMR1Q06787 632 aaKnown RBP eCLIP20.25■□□□□ 0.83
SSH3-205ENST00000527821 TEKT1Q969V4 418 aa20.25■□□□□ 0.83
SSH3-205ENST00000527821 PRMT6Q96LA8 375 aaPredicted RBP20.25■□□□□ 0.83
SSH3-205ENST00000527821 ADM5C9JUS6 153 aa20.24■□□□□ 0.83
SSH3-205ENST00000527821 SMARCA5O60264 1052 aaPredicted RBP20.24■□□□□ 0.83
SSH3-205ENST00000527821 SPTY2D1Q68D10 685 aaPredicted RBP20.24■□□□□ 0.83
SSH3-205ENST00000527821 ZNF512BQ96KM6 892 aaPredicted RBP20.24■□□□□ 0.83
SSH3-205ENST00000527821 SNRKQ9NRH2 765 aa20.24■□□□□ 0.83
SSH3-205ENST00000527821 ECM29Q5VYK3 1845 aa20.24■□□□□ 0.83
SSH3-205ENST00000527821 TRPM7Q96QT4 1865 aa20.23■□□□□ 0.83
SSH3-205ENST00000527821 MRIQ9BWK5 157 aa20.23■□□□□ 0.83
SSH3-205ENST00000527821 ZNF408Q9H9D4 720 aa20.23■□□□□ 0.83
SSH3-205ENST00000527821 SCAF8Q9UPN6 1271 aaKnown RBP20.23■□□□□ 0.83
SSH3-205ENST00000527821 AKAP11Q9UKA4 1901 aa20.22■□□□□ 0.83
SSH3-205ENST00000527821 CLRN2A0PK11 232 aa20.22■□□□□ 0.83
SSH3-205ENST00000527821 HTRA3P83110 453 aa20.22■□□□□ 0.83
SSH3-205ENST00000527821 HDAC1Q13547 482 aaPredicted RBP20.22■□□□□ 0.83
SSH3-205ENST00000527821 DLK2Q6UY11 383 aa20.22■□□□□ 0.83
SSH3-205ENST00000527821 TBC1D9Q6ZT07 1266 aa20.22■□□□□ 0.83
SSH3-205ENST00000527821 ERICH6Q7L0X2 663 aa20.22■□□□□ 0.83
SSH3-205ENST00000527821 DZIP1Q86YF9 867 aaKnown RBP20.22■□□□□ 0.83
SSH3-205ENST00000527821 APOBEC3FQ8IUX4 373 aaKnown RBP20.22■□□□□ 0.83
SSH3-205ENST00000527821 TMEM88BA6NKF7 163 aa20.21■□□□□ 0.83
SSH3-205ENST00000527821 ZAP70P43403 619 aa20.21■□□□□ 0.83
SSH3-205ENST00000527821 DIXDC1Q155Q3 683 aa20.21■□□□□ 0.83
SSH3-205ENST00000527821 HHIPL2Q6UWX4 724 aa20.21■□□□□ 0.83
SSH3-205ENST00000527821 ZDHHC15Q96MV8 337 aa20.21■□□□□ 0.83
SSH3-205ENST00000527821 TDRD3Q9H7E2 651 aaKnown RBP20.21■□□□□ 0.83
SSH3-205ENST00000527821 VEZTQ9HBM0 779 aa20.21■□□□□ 0.83
SSH3-205ENST00000527821 CREBZFQ9NS37 354 aa20.21■□□□□ 0.83
SSH3-205ENST00000527821 CELF2O95319 508 aaKnown RBP20.2■□□□□ 0.82
SSH3-205ENST00000527821 RWDD1Q9H446 243 aaPredicted RBP20.2■□□□□ 0.82
SSH3-205ENST00000527821 LRP2BPQ9P2M1 347 aa20.2■□□□□ 0.82
SSH3-205ENST00000527821 AOX1Q06278 1338 aa20.2■□□□□ 0.82
SSH3-205ENST00000527821 SLF2Q8IX21 1173 aa20.19■□□□□ 0.82
SSH3-205ENST00000527821 GCC1Q96CN9 775 aa20.19■□□□□ 0.82
SSH3-205ENST00000527821 RAI14Q9P0K7 980 aa20.19■□□□□ 0.82
SSH3-205ENST00000527821 ZNF70Q9UC06 446 aaPredicted RBP20.19■□□□□ 0.82
SSH3-205ENST00000527821 ZBTB47Q9UFB7 747 aaPredicted RBP20.19■□□□□ 0.82
SSH3-205ENST00000527821 MYH2Q9UKX2 1941 aa20.19■□□□□ 0.82
SSH3-205ENST00000527821 CYP2E1P05181 493 aaPredicted RBP20.18■□□□□ 0.82
SSH3-205ENST00000527821 MECOMQ03112 1051 aa20.18■□□□□ 0.82
SSH3-205ENST00000527821 SPDYE2Q495Y8 402 aa20.18■□□□□ 0.82
SSH3-205ENST00000527821 CST9Q5W186 159 aa20.18■□□□□ 0.82
SSH3-205ENST00000527821 CDCA5Q96FF9 252 aa20.18■□□□□ 0.82
SSH3-205ENST00000527821 DAGLAQ9Y4D2 1042 aa20.18■□□□□ 0.82
SSH3-205ENST00000527821 PRAMEF18Q5VWM3 479 aa20.17■□□□□ 0.82
SSH3-205ENST00000527821 APOBEC3HQ6NTF7 200 aaKnown RBP20.17■□□□□ 0.82
SSH3-205ENST00000527821 TMOD2Q9NZR1 351 aa20.17■□□□□ 0.82
SSH3-205ENST00000527821 ABT1Q9ULW3 272 aaKnown RBP20.17■□□□□ 0.82
SSH3-205ENST00000527821 NDUFB9Q9Y6M9 179 aa20.17■□□□□ 0.82
SSH3-205ENST00000527821 GSTO1P78417 241 aa20.16■□□□□ 0.82
SSH3-205ENST00000527821 TNFAIP1Q13829 316 aa20.16■□□□□ 0.82
SSH3-205ENST00000527821 ANKRD45Q5TZF3 282 aa20.16■□□□□ 0.82
SSH3-205ENST00000527821 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.16■□□□□ 0.82
SSH3-205ENST00000527821 DEFB129Q9H1M3 183 aa20.16■□□□□ 0.82
SSH3-205ENST00000527821 TCP10L2B9ZVM9 353 aa20.15■□□□□ 0.82
SSH3-205ENST00000527821 LDHCP07864 332 aa20.15■□□□□ 0.82
SSH3-205ENST00000527821 NSUN4Q96CB9 384 aaKnown RBP20.15■□□□□ 0.82
SSH3-205ENST00000527821 GPATCH3Q96I76 525 aa20.15■□□□□ 0.82
SSH3-205ENST00000527821 DNAJC2Q99543 621 aaKnown RBP20.15■□□□□ 0.82
SSH3-205ENST00000527821 BOLA2Q9H3K6 86 aa20.15■□□□□ 0.82
SSH3-205ENST00000527821 PIH1D3Q9NQM4 214 aaKnown RBP20.15■□□□□ 0.82
SSH3-205ENST00000527821 PPP2R3BQ9Y5P8 575 aa20.15■□□□□ 0.82
SSH3-205ENST00000527821 MYO5AQ9Y4I1 1855 aaKnown RBP20.15■□□□□ 0.82
SSH3-205ENST00000527821 MROH7-TTC4A0A0A0MT08 1334 aa20.14■□□□□ 0.81
SSH3-205ENST00000527821 GAKO14976 1311 aa20.14■□□□□ 0.81
SSH3-205ENST00000527821 IDH1O75874 414 aaKnown RBP20.14■□□□□ 0.81
SSH3-205ENST00000527821 IGHDP01880 384 aa20.14■□□□□ 0.81
SSH3-205ENST00000527821 ATP5JP18859 108 aa20.14■□□□□ 0.81
SSH3-205ENST00000527821 NF2P35240 595 aa20.14■□□□□ 0.81
SSH3-205ENST00000527821 TNNI2P48788 182 aa20.14■□□□□ 0.81
SSH3-205ENST00000527821 CACNB3P54284 484 aa20.14■□□□□ 0.81
SSH3-205ENST00000527821 RASA3Q14644 834 aa20.14■□□□□ 0.81
SSH3-205ENST00000527821 ZNF384Q8TF68 577 aa20.14■□□□□ 0.81
SSH3-205ENST00000527821 FAM163AQ96GL9 167 aaPredicted RBP20.14■□□□□ 0.81
SSH3-205ENST00000527821 ANTXR1Q9H6X2 564 aa20.14■□□□□ 0.81
SSH3-205ENST00000527821 MAST2Q6P0Q8 1798 aa20.13■□□□□ 0.81
SSH3-205ENST00000527821 TTF1Q15361 905 aaPredicted RBP20.13■□□□□ 0.81
SSH3-205ENST00000527821 NAA16Q6N069 864 aaPredicted RBP20.13■□□□□ 0.81
SSH3-205ENST00000527821 C2orf69Q8N8R5 385 aa20.13■□□□□ 0.81
SSH3-205ENST00000527821 GBA2Q9HCG7 927 aaPredicted RBP20.13■□□□□ 0.81
SSH3-205ENST00000527821 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
SSH3-205ENST00000527821 USP40Q9NVE5 1235 aa20.13■□□□□ 0.81
SSH3-205ENST00000527821 GOLIM4O00461 696 aa20.12■□□□□ 0.81
SSH3-205ENST00000527821 BTDP43251 543 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms