RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
CAPN1-210ENST00000527699 TNFRSF10AO00220 468 aa12.59□□□□□ -0.39
CAPN1-210ENST00000527699 IFIT5Q13325 482 aaKnown RBP12.59□□□□□ -0.39
CAPN1-210ENST00000527699 CFAP100Q494V2 611 aa12.59□□□□□ -0.39
CAPN1-210ENST00000527699 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
CAPN1-210ENST00000527699 SLC4A10Q6U841 1118 aa12.59□□□□□ -0.39
CAPN1-210ENST00000527699 APOBEC3FQ8IUX4 373 aaKnown RBP12.59□□□□□ -0.39
CAPN1-210ENST00000527699 LINS1Q8NG48 757 aa12.59□□□□□ -0.39
CAPN1-210ENST00000527699 DEFB129Q9H1M3 183 aa12.59□□□□□ -0.39
CAPN1-210ENST00000527699 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
CAPN1-210ENST00000527699 LRIT3Q3SXY7 679 aa12.58□□□□□ -0.4
CAPN1-210ENST00000527699 ZBED3Q96IU2 234 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-210ENST00000527699 SNX27Q96L92 541 aa12.58□□□□□ -0.4
CAPN1-210ENST00000527699 CNNM1Q9NRU3 951 aa12.58□□□□□ -0.4
CAPN1-210ENST00000527699 MAP3K12Q12852 859 aa12.57□□□□□ -0.4
CAPN1-210ENST00000527699 BEND3Q5T5X7 828 aa12.57□□□□□ -0.4
CAPN1-210ENST00000527699 NBPF12Q5TAG4 269 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-210ENST00000527699 ZNF804AQ7Z570 1209 aa12.57□□□□□ -0.4
CAPN1-210ENST00000527699 PRMT6Q96LA8 375 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-210ENST00000527699 GUCD1Q96NT3 240 aa12.57□□□□□ -0.4
CAPN1-210ENST00000527699 PUS3Q9BZE2 481 aaKnown RBP12.57□□□□□ -0.4
CAPN1-210ENST00000527699 IQSEC3Q9UPP2 1182 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-210ENST00000527699 BMP8BP34820 402 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 GYG1P46976 350 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 GJA8P48165 433 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 KIF22Q14807 665 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 LDLRAD1Q5T700 205 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 LDHAL6AQ6ZMR3 332 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 TDHQ8IZJ6 230 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 WNK4Q96J92 1243 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 BIN2Q9UBW5 565 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-210ENST00000527699 ZMYND8Q9ULU4 1186 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-210ENST00000527699 IL16Q14005 1332 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 SSC5DA1L4H1 1573 aa12.56□□□□□ -0.4
CAPN1-210ENST00000527699 ZBTB48P10074 688 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-210ENST00000527699 GJA5P36382 358 aa12.55□□□□□ -0.4
CAPN1-210ENST00000527699 CCDC57Q2TAC2 916 aa12.55□□□□□ -0.4
CAPN1-210ENST00000527699 UBE2Q1Q7Z7E8 422 aa12.55□□□□□ -0.4
CAPN1-210ENST00000527699 CDAN1Q8IWY9 1227 aa12.55□□□□□ -0.4
CAPN1-210ENST00000527699 MAFAQ8NHW3 353 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-210ENST00000527699 SUCLG2Q96I99 432 aa12.55□□□□□ -0.4
CAPN1-210ENST00000527699 GDF15Q99988 308 aa12.55□□□□□ -0.4
CAPN1-210ENST00000527699 RNF208Q9H0X6 261 aa12.55□□□□□ -0.4
CAPN1-210ENST00000527699 TDRD3Q9H7E2 651 aaKnown RBP12.55□□□□□ -0.4
CAPN1-210ENST00000527699 ELP3Q9H9T3 547 aa12.55□□□□□ -0.4
CAPN1-210ENST00000527699 C9orf78Q9NZ63 289 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-210ENST00000527699 SPDYE2BA6NHP3 402 aa12.54□□□□□ -0.4
CAPN1-210ENST00000527699 TCP10L2B9ZVM9 353 aa12.54□□□□□ -0.4
CAPN1-210ENST00000527699 MYO1BO43795 1136 aa12.54□□□□□ -0.4
CAPN1-210ENST00000527699 PPP1R12BO60237 982 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-210ENST00000527699 USP2O75604 605 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-210ENST00000527699 SPDYE6P0CI01 402 aa12.54□□□□□ -0.4
CAPN1-210ENST00000527699 IL1R1P14778 569 aa12.54□□□□□ -0.4
CAPN1-210ENST00000527699 CHAF1AQ13111 956 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-210ENST00000527699 RASA3Q14644 834 aa12.54□□□□□ -0.4
CAPN1-210ENST00000527699 C7orf61Q8IZ16 206 aa12.54□□□□□ -0.4
CAPN1-210ENST00000527699 ZSWIM8A7E2V4 1837 aa12.53□□□□□ -0.4
CAPN1-210ENST00000527699 GRM8O00222 908 aa12.53□□□□□ -0.4
CAPN1-210ENST00000527699 GJB1P08034 283 aa12.53□□□□□ -0.4
CAPN1-210ENST00000527699 CCL5P13501 91 aa12.53□□□□□ -0.4
CAPN1-210ENST00000527699 CACNB3P54284 484 aa12.53□□□□□ -0.4
CAPN1-210ENST00000527699 TAF1CQ15572 869 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-210ENST00000527699 GRIK5Q16478 980 aa12.53□□□□□ -0.4
CAPN1-210ENST00000527699 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
CAPN1-210ENST00000527699 UBE2OQ9C0C9 1292 aaKnown RBP12.53□□□□□ -0.4
CAPN1-210ENST00000527699 ARHGAP39Q9C0H5 1083 aa12.53□□□□□ -0.4
CAPN1-210ENST00000527699 ZFYVE28Q9HCC9 887 aa12.53□□□□□ -0.4
CAPN1-210ENST00000527699 ZNF70Q9UC06 446 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-210ENST00000527699 TTF2Q9UNY4 1162 aaKnown RBP12.53□□□□□ -0.4
CAPN1-210ENST00000527699 ANP32CO43423 234 aa12.52□□□□□ -0.41
CAPN1-210ENST00000527699 MFSD14BQ5SR56 506 aa12.52□□□□□ -0.41
CAPN1-210ENST00000527699 WDR63Q8IWG1 891 aa12.52□□□□□ -0.41
CAPN1-210ENST00000527699 EYSQ5T1H1 3165 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 A0A1B0GUL6 1792 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 CACNA1AO00555 2505 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 NBPF7P0C2Y1 421 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-210ENST00000527699 SYN1P17600 705 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 HIBADHP31937 336 aaKnown RBP12.51□□□□□ -0.41
CAPN1-210ENST00000527699 IREB2P48200 963 aaKnown RBP12.51□□□□□ -0.41
CAPN1-210ENST00000527699 SUPT20HL1Q3ZLR7 823 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 LRRC24Q50LG9 513 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 C15orf52Q6ZUT6 534 aaKnown RBP12.51□□□□□ -0.41
CAPN1-210ENST00000527699 MTMR14Q8NCE2 650 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 KLHDC4Q8TBB5 520 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 RAET1EQ8TD07 263 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 U2AF1L4Q8WU68 220 aaKnown RBP12.51□□□□□ -0.41
CAPN1-210ENST00000527699 FAM84BQ96KN1 310 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-210ENST00000527699 PTPN18Q99952 460 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 SRCIN1Q9C0H9 1055 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 TMEM39BQ9GZU3 492 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
CAPN1-210ENST00000527699 FRAT2O75474 233 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-210ENST00000527699 GRK4P32298 578 aa12.5□□□□□ -0.41
CAPN1-210ENST00000527699 MAGEA10P43363 369 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-210ENST00000527699 CRKP46108 304 aa12.5□□□□□ -0.41
CAPN1-210ENST00000527699 UBXN2AP68543 259 aa12.5□□□□□ -0.41
CAPN1-210ENST00000527699 ZNF697Q5TEC3 545 aa12.5□□□□□ -0.41
CAPN1-210ENST00000527699 TDRD7Q8NHU6 1098 aaKnown RBP12.5□□□□□ -0.41
CAPN1-210ENST00000527699 OPTNQ96CV9 577 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms