RNA–Protein interactions for RNA: ENST00000527551.1

USH1C-206, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 371 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-206ENST00000527551 F8W031 263 aaPredicted RBP15.6■□□□□ 0.09
USH1C-206ENST00000527551 WNT10BO00744 389 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 SMARCA5O60264 1052 aaPredicted RBP15.6■□□□□ 0.09
USH1C-206ENST00000527551 EGFRP00533 1210 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 POTEJP0CG39 1038 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 ATP5JP18859 108 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 SCARF1Q14162 830 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 CFAP100Q494V2 611 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 RBM26Q5T8P6 1007 aaKnown RBP15.6■□□□□ 0.09
USH1C-206ENST00000527551 ANKRD45Q5TZF3 282 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 ERICH6Q7L0X2 663 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 DCPSQ96C86 337 aaKnown RBP15.6■□□□□ 0.09
USH1C-206ENST00000527551 ZDHHC15Q96MV8 337 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 ECHDC1Q9NTX5 307 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 ABCF2Q9UG63 623 aa15.6■□□□□ 0.09
USH1C-206ENST00000527551 TRPM7Q96QT4 1865 aa15.59■□□□□ 0.09
USH1C-206ENST00000527551 SPDYE2BA6NHP3 402 aa15.59■□□□□ 0.09
USH1C-206ENST00000527551 IGHDP01880 384 aa15.59■□□□□ 0.09
USH1C-206ENST00000527551 SPDYE6P0CI01 402 aa15.59■□□□□ 0.09
USH1C-206ENST00000527551 PRDX5P30044 214 aa15.59■□□□□ 0.09
USH1C-206ENST00000527551 CRKP46108 304 aa15.59■□□□□ 0.09
USH1C-206ENST00000527551 C1QTNF8P60827 252 aa15.59■□□□□ 0.09
USH1C-206ENST00000527551 GSTO1P78417 241 aa15.59■□□□□ 0.09
USH1C-206ENST00000527551 TTF1Q15361 905 aaPredicted RBP15.59■□□□□ 0.09
USH1C-206ENST00000527551 CDC37L1Q7L3B6 337 aa15.59■□□□□ 0.09
USH1C-206ENST00000527551 DZIP1Q86YF9 867 aaKnown RBP15.59■□□□□ 0.09
USH1C-206ENST00000527551 FAM163AQ96GL9 167 aaPredicted RBP15.59■□□□□ 0.09
USH1C-206ENST00000527551 TTC41PQ6P2S7 1318 aa15.59■□□□□ 0.09
USH1C-206ENST00000527551 RBM5P52756 815 aaKnown RBP eCLIP15.58■□□□□ 0.08
USH1C-206ENST00000527551 GRIK5Q16478 980 aa15.58■□□□□ 0.08
USH1C-206ENST00000527551 ERICH6BQ5W0A0 696 aa15.58■□□□□ 0.08
USH1C-206ENST00000527551 PI16Q6UXB8 463 aa15.58■□□□□ 0.08
USH1C-206ENST00000527551 APOBEC3FQ8IUX4 373 aaKnown RBP15.58■□□□□ 0.08
USH1C-206ENST00000527551 CNTROBQ8N137 903 aa15.58■□□□□ 0.08
USH1C-206ENST00000527551 LRP2BPQ9P2M1 347 aa15.58■□□□□ 0.08
USH1C-206ENST00000527551 MYO5AQ9Y4I1 1855 aaKnown RBP15.58■□□□□ 0.08
USH1C-206ENST00000527551 ERC2O15083 957 aa15.57■□□□□ 0.08
USH1C-206ENST00000527551 ITGBL1O95965 494 aaPredicted RBP15.57■□□□□ 0.08
USH1C-206ENST00000527551 CYP2E1P05181 493 aaPredicted RBP15.57■□□□□ 0.08
USH1C-206ENST00000527551 LDHCP07864 332 aa15.57■□□□□ 0.08
USH1C-206ENST00000527551 ZAP70P43403 619 aa15.57■□□□□ 0.08
USH1C-206ENST00000527551 NBPF9Q3BBW0 867 aa15.57■□□□□ 0.08
USH1C-206ENST00000527551 MAP1SQ66K74 1059 aaPredicted RBP15.57■□□□□ 0.08
USH1C-206ENST00000527551 SULF1Q8IWU6 871 aa15.57■□□□□ 0.08
USH1C-206ENST00000527551 GGA3Q9NZ52 723 aa15.57■□□□□ 0.08
USH1C-206ENST00000527551 MYH7P12883 1935 aa15.56■□□□□ 0.08
USH1C-206ENST00000527551 MAP4K4O95819 1239 aaPredicted RBP15.56■□□□□ 0.08
USH1C-206ENST00000527551 NUCB1Q02818 461 aa15.56■□□□□ 0.08
USH1C-206ENST00000527551 ANGEL2Q5VTE6 544 aaKnown RBP15.56■□□□□ 0.08
USH1C-206ENST00000527551 FKBP1CQ5VVH2 108 aa15.56■□□□□ 0.08
USH1C-206ENST00000527551 PRMT6Q96LA8 375 aaPredicted RBP15.56■□□□□ 0.08
USH1C-206ENST00000527551 HAUS7Q99871 368 aa15.56■□□□□ 0.08
USH1C-206ENST00000527551 SNRKQ9NRH2 765 aa15.56■□□□□ 0.08
USH1C-206ENST00000527551 RAI14Q9P0K7 980 aa15.56■□□□□ 0.08
USH1C-206ENST00000527551 PPP2R3BQ9Y5P8 575 aa15.56■□□□□ 0.08
USH1C-206ENST00000527551 GAKO14976 1311 aa15.56■□□□□ 0.08
USH1C-206ENST00000527551 PASKQ96RG2 1323 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 SALL3Q9BXA9 1300 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 GLRX3O76003 335 aaKnown RBP15.55■□□□□ 0.08
USH1C-206ENST00000527551 MX1P20591 662 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 MECOMQ03112 1051 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 MAP3K12Q12852 859 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 TNFAIP1Q13829 316 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 TBC1D9Q6ZT07 1266 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 KRT26Q7Z3Y9 468 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 CHD1LQ86WJ1 897 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 NSUN4Q96CB9 384 aaKnown RBP15.55■□□□□ 0.08
USH1C-206ENST00000527551 STAP2Q9UGK3 403 aa15.55■□□□□ 0.08
USH1C-206ENST00000527551 MROH7-TTC4A0A0A0MT08 1334 aa15.54■□□□□ 0.08
USH1C-206ENST00000527551 APOBEC3HQ6NTF7 200 aaKnown RBP15.54■□□□□ 0.08
USH1C-206ENST00000527551 CERS3Q8IU89 383 aa15.54■□□□□ 0.08
USH1C-206ENST00000527551 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
USH1C-206ENST00000527551 PAG1Q9NWQ8 432 aa15.54■□□□□ 0.08
USH1C-206ENST00000527551 TMOD2Q9NZR1 351 aa15.54■□□□□ 0.08
USH1C-206ENST00000527551 DAGLAQ9Y4D2 1042 aa15.54■□□□□ 0.08
USH1C-206ENST00000527551 AOX1Q06278 1338 aa15.53■□□□□ 0.08
USH1C-206ENST00000527551 TNNI2P48788 182 aa15.53■□□□□ 0.08
USH1C-206ENST00000527551 DIXDC1Q155Q3 683 aa15.53■□□□□ 0.08
USH1C-206ENST00000527551 NAA16Q6N069 864 aaPredicted RBP15.53■□□□□ 0.08
USH1C-206ENST00000527551 NOL10Q9BSC4 688 aaKnown RBP15.53■□□□□ 0.08
USH1C-206ENST00000527551 LNPKQ9C0E8 428 aa15.53■□□□□ 0.08
USH1C-206ENST00000527551 BOLA2Q9H3K6 86 aa15.53■□□□□ 0.08
USH1C-206ENST00000527551 PIH1D3Q9NQM4 214 aaKnown RBP15.53■□□□□ 0.08
USH1C-206ENST00000527551 ZNF70Q9UC06 446 aaPredicted RBP15.53■□□□□ 0.08
USH1C-206ENST00000527551 ASTN2O75129 1339 aaPredicted RBP15.52■□□□□ 0.08
USH1C-206ENST00000527551 GPR75-ASB3A0A0A6YYF3 556 aa15.52■□□□□ 0.08
USH1C-206ENST00000527551 GOLIM4O00461 696 aa15.52■□□□□ 0.08
USH1C-206ENST00000527551 IDH1O75874 414 aaKnown RBP15.52■□□□□ 0.08
USH1C-206ENST00000527551 HSPA6P17066 643 aa15.52■□□□□ 0.08
USH1C-206ENST00000527551 APLP1P51693 650 aa15.52■□□□□ 0.08
USH1C-206ENST00000527551 B4GALNT3Q6L9W6 998 aa15.52■□□□□ 0.08
USH1C-206ENST00000527551 USP48Q86UV5 1035 aa15.52■□□□□ 0.08
USH1C-206ENST00000527551 TICAM2Q86XR7 235 aa15.52■□□□□ 0.08
USH1C-206ENST00000527551 DNAJC2Q99543 621 aaKnown RBP15.52■□□□□ 0.08
USH1C-206ENST00000527551 GLIS2Q9BZE0 524 aaPredicted RBP15.52■□□□□ 0.08
USH1C-206ENST00000527551 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.52■□□□□ 0.08
USH1C-206ENST00000527551 TDRD3Q9H7E2 651 aaKnown RBP15.52■□□□□ 0.08
USH1C-206ENST00000527551 BAG3O95817 575 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms