RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 ACTL7BQ9Y614 415 aa5.87□□□□□ -1.47
CLNS1A-209ENST00000527299 A6NHS1 94 aa5.86□□□□□ -1.47
CLNS1A-209ENST00000527299 BIN1O00499 593 aa5.86□□□□□ -1.47
CLNS1A-209ENST00000527299 EIF4EBP3O60516 100 aaPredicted RBP5.86□□□□□ -1.47
CLNS1A-209ENST00000527299 PDGFAP04085 211 aa5.86□□□□□ -1.47
CLNS1A-209ENST00000527299 NFICP08651 508 aa5.86□□□□□ -1.47
CLNS1A-209ENST00000527299 SRPK2P78362 688 aaKnown RBP5.86□□□□□ -1.47
CLNS1A-209ENST00000527299 ZNF792Q3KQV3 632 aa5.86□□□□□ -1.47
CLNS1A-209ENST00000527299 TMEM164Q5U3C3 297 aa5.86□□□□□ -1.47
CLNS1A-209ENST00000527299 BHLHE41Q9C0J9 482 aaPredicted RBP5.86□□□□□ -1.47
CLNS1A-209ENST00000527299 SEMA6CQ9H3T2 930 aa5.86□□□□□ -1.47
CLNS1A-209ENST00000527299 EREGO14944 169 aa5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 PCSK2P16519 638 aa5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 GSTM4Q03013 218 aa5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 DNM1Q05193 864 aaKnown RBP5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 PLCL1Q15111 1095 aa5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 SEZ6L2Q6UXD5 910 aa5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 ZNF574Q6ZN55 896 aaPredicted RBP5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 SPRED2Q7Z698 418 aa5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 STK11IPQ8N1F8 1099 aa5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 ACSS3Q9H6R3 686 aa5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 SEPT3Q9UH03 358 aa5.85□□□□□ -1.47
CLNS1A-209ENST00000527299 FARP2O94887 1054 aaPredicted RBP5.84□□□□□ -1.47
CLNS1A-209ENST00000527299 EDN3P14138 238 aa5.84□□□□□ -1.47
CLNS1A-209ENST00000527299 MZF1P28698 734 aaPredicted RBP5.84□□□□□ -1.47
CLNS1A-209ENST00000527299 C8orf34Q49A92 452 aa5.84□□□□□ -1.47
CLNS1A-209ENST00000527299 ASAP3Q8TDY4 903 aa5.84□□□□□ -1.47
CLNS1A-209ENST00000527299 SLAIN2Q9P270 581 aa5.84□□□□□ -1.47
CLNS1A-209ENST00000527299 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.83□□□□□ -1.48
CLNS1A-209ENST00000527299 ATG7O95352 703 aa5.83□□□□□ -1.48
CLNS1A-209ENST00000527299 RAB6AP20340 208 aa5.83□□□□□ -1.48
CLNS1A-209ENST00000527299 ATG4DQ86TL0 474 aaPredicted RBP5.83□□□□□ -1.48
CLNS1A-209ENST00000527299 GLIS3Q8NEA6 775 aa5.83□□□□□ -1.48
CLNS1A-209ENST00000527299 GSX1Q9H4S2 264 aaPredicted RBP5.83□□□□□ -1.48
CLNS1A-209ENST00000527299 C1GALT1Q9NS00 363 aa5.83□□□□□ -1.48
CLNS1A-209ENST00000527299 FAM105AQ9NUU6 356 aa5.83□□□□□ -1.48
CLNS1A-209ENST00000527299 ZNF777Q9ULD5 760 aaPredicted RBP5.83□□□□□ -1.48
CLNS1A-209ENST00000527299 CTSBP07858 339 aa5.82□□□□□ -1.48
CLNS1A-209ENST00000527299 NOM1Q5C9Z4 860 aaKnown RBP5.82□□□□□ -1.48
CLNS1A-209ENST00000527299 PEAR1Q5VY43 1037 aaPredicted RBP5.82□□□□□ -1.48
CLNS1A-209ENST00000527299 OGFOD3Q6PK18 319 aa5.82□□□□□ -1.48
CLNS1A-209ENST00000527299 TTC16Q8NEE8 873 aa5.82□□□□□ -1.48
CLNS1A-209ENST00000527299 HELQQ8TDG4 1101 aa5.82□□□□□ -1.48
CLNS1A-209ENST00000527299 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
CLNS1A-209ENST00000527299 PHACTR2O75167 634 aa5.81□□□□□ -1.48
CLNS1A-209ENST00000527299 TNFRSF21O75509 655 aa5.81□□□□□ -1.48
CLNS1A-209ENST00000527299 BNIP3Q12983 259 aa5.81□□□□□ -1.48
CLNS1A-209ENST00000527299 DYMQ7RTS9 669 aa5.81□□□□□ -1.48
CLNS1A-209ENST00000527299 FAM9AQ8IZU1 332 aaPredicted RBP5.81□□□□□ -1.48
CLNS1A-209ENST00000527299 TMEM40Q8WWA1 233 aa5.81□□□□□ -1.48
CLNS1A-209ENST00000527299 MISP3Q96FF7 219 aa5.81□□□□□ -1.48
CLNS1A-209ENST00000527299 METTL12A8MUP2 240 aa5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 DYNC1LI2O43237 492 aaPredicted RBP5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 CYP11A1P05108 521 aa5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 FUT4P22083 530 aa5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 MAOBP27338 520 aa5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 EIF1AXP47813 144 aaKnown RBP5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 PKN1Q16512 942 aa5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 TMEM132AQ24JP5 1023 aa5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 ZNF423Q2M1K9 1284 aa5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 HP1BP3Q5SSJ5 553 aaPredicted RBP5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 SNX29Q8TEQ0 813 aa5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 FAM168AQ92567 244 aa5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 LATS2Q9NRM7 1088 aa5.8□□□□□ -1.48
CLNS1A-209ENST00000527299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 RNASE1P07998 156 aaKnown RBP5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 ATP2B4P23634 1241 aa5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 ASPAP45381 313 aa5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 POU4F3Q15319 338 aa5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 AKAP4Q5JQC9 854 aa5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 CLEC4MQ9H2X3 399 aaPredicted RBP5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 RC3H2Q9HBD1 1191 aaKnown RBP5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 MBNL3Q9NUK0 354 aaKnown RBP5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 POLIQ9UNA4 740 aa5.79□□□□□ -1.48
CLNS1A-209ENST00000527299 CD8BP10966 210 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 PCDH1Q08174 1060 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 CYP27C1Q4G0S4 372 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 KSR1Q8IVT5 923 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 NETO1Q8TDF5 533 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 ZFYVE1Q9HBF4 777 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 RAD18Q9NS91 495 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 FOXD3Q9UJU5 478 aaPredicted RBP5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 ADAMTS6Q9UKP5 1117 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 AP4E1Q9UPM8 1137 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 AMOTL2Q9Y2J4 779 aa5.78□□□□□ -1.48
CLNS1A-209ENST00000527299 A0A096LPE4 126 aa5.77□□□□□ -1.49
CLNS1A-209ENST00000527299 A0A1W2PPZ6 126 aa5.77□□□□□ -1.49
CLNS1A-209ENST00000527299 MPSTP25325 297 aa5.77□□□□□ -1.49
CLNS1A-209ENST00000527299 MESP2Q0VG99 397 aa5.77□□□□□ -1.49
CLNS1A-209ENST00000527299 PLD6Q8N2A8 252 aaKnown RBP5.77□□□□□ -1.49
CLNS1A-209ENST00000527299 VAV3Q9UKW4 847 aa5.77□□□□□ -1.49
CLNS1A-209ENST00000527299 DAGLAQ9Y4D2 1042 aa5.77□□□□□ -1.49
CLNS1A-209ENST00000527299 SYNGAP1Q96PV0 1343 aa5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 ECEL1O95672 775 aa5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 EHHADHQ08426 723 aa5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 ALKBH2Q6NS38 261 aa5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 CILP2Q8IUL8 1156 aa5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 CCNJLQ8IV13 435 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms